Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 AC162938.2-205ENSMUST00000217551 2828 ntBASIC3.69□□□□□ -1.82
Col8a1Q00780 Ghr-208ENSMUST00000161561 2749 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
Col8a1Q00780 Cftr-203ENSMUST00000115406 4341 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
Col8a1Q00780 Gm23175-201ENSMUST00000104371 132 ntBASIC3.69□□□□□ -1.82
Col8a1Q00780 Gm12252-201ENSMUST00000119517 219 ntBASIC3.69□□□□□ -1.82
Col8a1Q00780 Gm12335-201ENSMUST00000119738 327 ntBASIC3.69□□□□□ -1.82
Col8a1Q00780 Gm11398-201ENSMUST00000120330 320 ntBASIC3.69□□□□□ -1.82
Col8a1Q00780 Gm13903-201ENSMUST00000120945 193 ntBASIC3.69□□□□□ -1.82
Col8a1Q00780 Gm13424-201ENSMUST00000122301 354 ntBASIC3.69□□□□□ -1.82
Col8a1Q00780 Gm25051-201ENSMUST00000158602 249 ntBASIC3.69□□□□□ -1.82
Col8a1Q00780 Gm24224-201ENSMUST00000158828 258 ntBASIC3.69□□□□□ -1.82
Col8a1Q00780 Gm16326-201ENSMUST00000162843 414 ntBASIC3.69□□□□□ -1.82
Col8a1Q00780 Gm23921-201ENSMUST00000175258 107 ntBASIC3.69□□□□□ -1.82
Col8a1Q00780 Gm21738-201ENSMUST00000177817 681 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Col8a1Q00780 Spin2g-201ENSMUST00000178425 687 ntBASIC3.69□□□□□ -1.82
Col8a1Q00780 Gm27545-201ENSMUST00000184755 202 ntBASIC3.69□□□□□ -1.82
Col8a1Q00780 Mir195b-201ENSMUST00000184814 97 ntBASIC3.69□□□□□ -1.82
Col8a1Q00780 Gm20257-202ENSMUST00000188643 130 ntBASIC3.69□□□□□ -1.82
Col8a1Q00780 Gm28920-201ENSMUST00000189957 699 ntBASIC3.69□□□□□ -1.82
Col8a1Q00780 Gm43284-201ENSMUST00000200103 253 ntBASIC3.69□□□□□ -1.82
Col8a1Q00780 Gm20144-201ENSMUST00000203031 165 ntBASIC3.69□□□□□ -1.82
Col8a1Q00780 Gm2522-201ENSMUST00000204280 322 ntBASIC3.69□□□□□ -1.82
Col8a1Q00780 Gm34779-201ENSMUST00000210036 263 ntBASIC3.69□□□□□ -1.82
Col8a1Q00780 Gm45380-201ENSMUST00000210465 315 ntBASIC3.69□□□□□ -1.82
Col8a1Q00780 AC160865.1-201ENSMUST00000219873 151 ntBASIC3.69□□□□□ -1.82
Col8a1Q00780 AC132344.1-201ENSMUST00000221289 376 ntTSL 3 BASIC3.69□□□□□ -1.82
Col8a1Q00780 AC122298.1-201ENSMUST00000222574 165 ntTSL 5 BASIC3.69□□□□□ -1.82
Col8a1Q00780 AC239878.1-201ENSMUST00000224212 506 ntBASIC3.69□□□□□ -1.82
Col8a1Q00780 Gm22868-201ENSMUST00000083955 164 ntBASIC3.69□□□□□ -1.82
Col8a1Q00780 Rpl31-ps1-201ENSMUST00000085128 378 ntBASIC3.69□□□□□ -1.82
Col8a1Q00780 Med14-203ENSMUST00000115481 3729 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
Col8a1Q00780 Gm37639-201ENSMUST00000191623 2785 ntBASIC3.69□□□□□ -1.82
Col8a1Q00780 Gm43834-201ENSMUST00000197097 4830 ntBASIC3.69□□□□□ -1.82
Col8a1Q00780 Mybpc1-201ENSMUST00000119185 3752 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
Col8a1Q00780 Gm37115-201ENSMUST00000193750 2849 ntBASIC3.69□□□□□ -1.82
Col8a1Q00780 Vmn2r43-201ENSMUST00000066317 2849 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
Col8a1Q00780 5330437M03Rik-201ENSMUST00000201318 4083 ntBASIC3.69□□□□□ -1.82
Col8a1Q00780 Ccdc73-201ENSMUST00000111114 3944 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Col8a1Q00780 Gm17131-201ENSMUST00000164420 3846 ntBASIC3.68□□□□□ -1.82
Col8a1Q00780 Slfn8-202ENSMUST00000092838 3529 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Col8a1Q00780 Gm37387-201ENSMUST00000192201 1806 ntBASIC3.68□□□□□ -1.82
Col8a1Q00780 Gm43654-201ENSMUST00000200664 3417 ntBASIC3.68□□□□□ -1.82
Col8a1Q00780 Ank2-208ENSMUST00000182078 14305 ntAPPRIS P2 TSL 5 BASIC3.68□□□□□ -1.82
Col8a1Q00780 Vmn2r46-201ENSMUST00000171523 2430 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Col8a1Q00780 Igkv4-69-201ENSMUST00000103349 348 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Col8a1Q00780 Gm26418-201ENSMUST00000104275 137 ntBASIC3.68□□□□□ -1.82
Col8a1Q00780 Gm14401-201ENSMUST00000108968 247 ntTSL 5 BASIC3.68□□□□□ -1.82
Col8a1Q00780 Rps15a-ps8-201ENSMUST00000117914 387 ntBASIC3.68□□□□□ -1.82
Col8a1Q00780 Gm11325-201ENSMUST00000119967 469 ntBASIC3.68□□□□□ -1.82
Col8a1Q00780 Gm14916-201ENSMUST00000121904 204 ntBASIC3.68□□□□□ -1.82
Col8a1Q00780 Gm24596-201ENSMUST00000122504 107 ntBASIC3.68□□□□□ -1.82
Col8a1Q00780 Gm25783-201ENSMUST00000122525 190 ntBASIC3.68□□□□□ -1.82
Col8a1Q00780 Gm23137-201ENSMUST00000157559 107 ntBASIC3.68□□□□□ -1.82
Col8a1Q00780 Gm22601-201ENSMUST00000157595 250 ntBASIC3.68□□□□□ -1.82
Col8a1Q00780 Gm22328-201ENSMUST00000158074 112 ntBASIC3.68□□□□□ -1.82
Col8a1Q00780 1700058P15Rik-201ENSMUST00000159981 413 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
Col8a1Q00780 Gm17119-201ENSMUST00000163943 280 ntBASIC3.68□□□□□ -1.82
Col8a1Q00780 Gm17153-201ENSMUST00000171314 490 ntBASIC3.68□□□□□ -1.82
Col8a1Q00780 Gm24106-201ENSMUST00000175498 127 ntBASIC3.68□□□□□ -1.82
Col8a1Q00780 Gm25211-201ENSMUST00000177553 107 ntBASIC3.68□□□□□ -1.82
Col8a1Q00780 Gm22308-201ENSMUST00000177609 107 ntBASIC3.68□□□□□ -1.82
Col8a1Q00780 Gm24540-201ENSMUST00000177627 107 ntBASIC3.68□□□□□ -1.82
Col8a1Q00780 Gm25256-201ENSMUST00000177746 107 ntBASIC3.68□□□□□ -1.82
Col8a1Q00780 Gm22822-201ENSMUST00000177941 107 ntBASIC3.68□□□□□ -1.82
Col8a1Q00780 Rnu6-201ENSMUST00000178023 107 ntBASIC3.68□□□□□ -1.82
Col8a1Q00780 Gm23151-201ENSMUST00000178061 107 ntBASIC3.68□□□□□ -1.82
Col8a1Q00780 Gm25245-201ENSMUST00000178139 107 ntBASIC3.68□□□□□ -1.82
Col8a1Q00780 Gm14419-204ENSMUST00000178182 192 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
Col8a1Q00780 Gm24753-201ENSMUST00000178183 107 ntBASIC3.68□□□□□ -1.82
Col8a1Q00780 Gm25829-201ENSMUST00000178275 107 ntBASIC3.68□□□□□ -1.82
Col8a1Q00780 Gm22092-201ENSMUST00000178290 107 ntBASIC3.68□□□□□ -1.82
Col8a1Q00780 Gm24486-201ENSMUST00000178420 107 ntBASIC3.68□□□□□ -1.82
Col8a1Q00780 Gm23217-201ENSMUST00000178482 107 ntBASIC3.68□□□□□ -1.82
Col8a1Q00780 Gm26245-201ENSMUST00000178491 107 ntBASIC3.68□□□□□ -1.82
Col8a1Q00780 Gm24019-201ENSMUST00000178620 107 ntBASIC3.68□□□□□ -1.82
Col8a1Q00780 Gm23610-201ENSMUST00000178659 107 ntBASIC3.68□□□□□ -1.82
Col8a1Q00780 Gm23092-201ENSMUST00000178688 107 ntBASIC3.68□□□□□ -1.82
Col8a1Q00780 Gm25709-201ENSMUST00000178844 107 ntBASIC3.68□□□□□ -1.82
Col8a1Q00780 Gm2004-202ENSMUST00000178872 192 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
Col8a1Q00780 Gm25547-201ENSMUST00000178877 107 ntBASIC3.68□□□□□ -1.82
Col8a1Q00780 Gm25312-201ENSMUST00000178972 107 ntBASIC3.68□□□□□ -1.82
Col8a1Q00780 Gm24722-201ENSMUST00000179017 107 ntBASIC3.68□□□□□ -1.82
Col8a1Q00780 Gm22969-201ENSMUST00000179018 107 ntBASIC3.68□□□□□ -1.82
Col8a1Q00780 Gm25101-201ENSMUST00000179057 107 ntBASIC3.68□□□□□ -1.82
Col8a1Q00780 Gm26378-201ENSMUST00000179093 107 ntBASIC3.68□□□□□ -1.82
Col8a1Q00780 Gm24873-201ENSMUST00000179101 107 ntBASIC3.68□□□□□ -1.82
Col8a1Q00780 Gm23934-201ENSMUST00000179111 107 ntBASIC3.68□□□□□ -1.82
Col8a1Q00780 Gm22623-201ENSMUST00000179244 107 ntBASIC3.68□□□□□ -1.82
Col8a1Q00780 Gm26243-201ENSMUST00000179260 107 ntBASIC3.68□□□□□ -1.82
Col8a1Q00780 Gm25737-201ENSMUST00000179274 107 ntBASIC3.68□□□□□ -1.82
Col8a1Q00780 Gm22618-201ENSMUST00000179376 107 ntBASIC3.68□□□□□ -1.82
Col8a1Q00780 Gm24182-201ENSMUST00000179419 107 ntBASIC3.68□□□□□ -1.82
Col8a1Q00780 Gm14295-203ENSMUST00000179435 192 ntTSL 5 BASIC3.68□□□□□ -1.82
Col8a1Q00780 Gm24242-201ENSMUST00000179440 107 ntBASIC3.68□□□□□ -1.82
Col8a1Q00780 Gm25064-201ENSMUST00000179535 107 ntBASIC3.68□□□□□ -1.82
Col8a1Q00780 Gm26295-201ENSMUST00000179690 107 ntBASIC3.68□□□□□ -1.82
Col8a1Q00780 Gm23712-201ENSMUST00000179713 107 ntBASIC3.68□□□□□ -1.82
Col8a1Q00780 Gm22823-201ENSMUST00000179754 107 ntBASIC3.68□□□□□ -1.82
Col8a1Q00780 Gm22360-201ENSMUST00000179775 107 ntBASIC3.68□□□□□ -1.82
Col8a1Q00780 Gm24978-201ENSMUST00000179782 107 ntBASIC3.68□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 68.7 ms