Protein–RNA interactions for Protein: P70362

Ufd1, Ubiquitin recognition factor in ER-associated degradation protein 1, mousemouse

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ufd1P70362 Gm24436-201ENSMUST00000157889 302 ntBASIC2.37□□□□□ -2.03
Ufd1P70362 Gm25605-201ENSMUST00000158364 124 ntBASIC2.37□□□□□ -2.03
Ufd1P70362 Gm24546-201ENSMUST00000158652 102 ntBASIC2.37□□□□□ -2.03
Ufd1P70362 Gm15562-201ENSMUST00000161397 426 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
Ufd1P70362 Gm5277-201ENSMUST00000164923 556 ntBASIC2.37□□□□□ -2.03
Ufd1P70362 Gm20673-201ENSMUST00000177167 430 ntBASIC2.37□□□□□ -2.03
Ufd1P70362 Gm23619-201ENSMUST00000178411 94 ntBASIC2.37□□□□□ -2.03
Ufd1P70362 Gm25474-201ENSMUST00000179052 94 ntBASIC2.37□□□□□ -2.03
Ufd1P70362 Gm22047-201ENSMUST00000179176 94 ntBASIC2.37□□□□□ -2.03
Ufd1P70362 Gm22917-201ENSMUST00000180116 110 ntBASIC2.37□□□□□ -2.03
Ufd1P70362 Mir3620-201ENSMUST00000184710 61 ntBASIC2.37□□□□□ -2.03
Ufd1P70362 Gm6060-201ENSMUST00000188671 251 ntBASIC2.37□□□□□ -2.03
Ufd1P70362 Gm17966-201ENSMUST00000193453 594 ntBASIC2.37□□□□□ -2.03
Ufd1P70362 Ighv1-40-201ENSMUST00000194231 345 ntBASIC2.37□□□□□ -2.03
Ufd1P70362 Gm42857-201ENSMUST00000200823 339 ntBASIC2.37□□□□□ -2.03
Ufd1P70362 Gm19252-201ENSMUST00000204705 305 ntBASIC2.37□□□□□ -2.03
Ufd1P70362 Gm45101-201ENSMUST00000208327 232 ntBASIC2.37□□□□□ -2.03
Ufd1P70362 Gm44600-201ENSMUST00000208540 111 ntBASIC2.37□□□□□ -2.03
Ufd1P70362 Gm45860-201ENSMUST00000212700 334 ntBASIC2.37□□□□□ -2.03
Ufd1P70362 Olfr953-ps1-201ENSMUST00000214463 892 ntBASIC2.37□□□□□ -2.03
Ufd1P70362 Rpl26-ps6-201ENSMUST00000216693 434 ntBASIC2.37□□□□□ -2.03
Ufd1P70362 Prl2c5-201ENSMUST00000021778 844 ntAPPRIS P3 TSL 1 (best) BASIC2.37□□□□□ -2.03
Ufd1P70362 AC129202.3-201ENSMUST00000224413 733 ntBASIC2.37□□□□□ -2.03
Ufd1P70362 CT030254.2-201ENSMUST00000225902 502 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
Ufd1P70362 Olfr951-201ENSMUST00000078531 945 ntAPPRIS P2 BASIC2.37□□□□□ -2.03
Ufd1P70362 Olfr954-201ENSMUST00000080329 945 ntAPPRIS P2 BASIC2.37□□□□□ -2.03
Ufd1P70362 Gm25147-201ENSMUST00000083030 105 ntBASIC2.37□□□□□ -2.03
Ufd1P70362 Mir423-201ENSMUST00000083584 109 ntBASIC2.37□□□□□ -2.03
Ufd1P70362 Gm10161-201ENSMUST00000091506 204 ntBASIC2.37□□□□□ -2.03
Ufd1P70362 Gm10337-201ENSMUST00000096145 165 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
Ufd1P70362 Tex16-201ENSMUST00000038546 3972 ntAPPRIS P2 TSL 1 (best) BASIC2.36□□□□□ -2.03
Ufd1P70362 Zfp970-202ENSMUST00000108952 1569 ntAPPRIS P1 TSL 2 BASIC2.36□□□□□ -2.03
Ufd1P70362 AC164164.1-201ENSMUST00000223245 2340 ntBASIC2.36□□□□□ -2.03
Ufd1P70362 Trbv5-201ENSMUST00000103266 368 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
Ufd1P70362 n-R5s31-201ENSMUST00000104162 110 ntBASIC2.36□□□□□ -2.03
Ufd1P70362 Gm13806-201ENSMUST00000117822 325 ntBASIC2.36□□□□□ -2.03
Ufd1P70362 Rpl23a-ps13-201ENSMUST00000120350 441 ntBASIC2.36□□□□□ -2.03
Ufd1P70362 Gm12155-201ENSMUST00000121267 160 ntBASIC2.36□□□□□ -2.03
Ufd1P70362 Gm23885-201ENSMUST00000122682 294 ntBASIC2.36□□□□□ -2.03
Ufd1P70362 Gm23206-201ENSMUST00000122720 184 ntBASIC2.36□□□□□ -2.03
Ufd1P70362 Pfdn4-205ENSMUST00000136839 452 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
Ufd1P70362 Gm14951-201ENSMUST00000143622 570 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
Ufd1P70362 Mir1934-201ENSMUST00000158127 83 ntBASIC2.36□□□□□ -2.03
Ufd1P70362 Gm15680-201ENSMUST00000161597 465 ntTSL 5 BASIC2.36□□□□□ -2.03
Ufd1P70362 Gm9593-201ENSMUST00000166034 469 ntBASIC2.36□□□□□ -2.03
Ufd1P70362 Gm4540-201ENSMUST00000170669 429 ntBASIC2.36□□□□□ -2.03
Ufd1P70362 Gm3104-201ENSMUST00000171004 473 ntBASIC2.36□□□□□ -2.03
Ufd1P70362 Vmn1r-ps61-201ENSMUST00000173771 822 ntBASIC2.36□□□□□ -2.03
Ufd1P70362 Gm20672-201ENSMUST00000176605 261 ntBASIC2.36□□□□□ -2.03
Ufd1P70362 Gm24713-201ENSMUST00000178850 107 ntBASIC2.36□□□□□ -2.03
Ufd1P70362 Gm25448-201ENSMUST00000180065 107 ntBASIC2.36□□□□□ -2.03
Ufd1P70362 Mir3473f-201ENSMUST00000183743 136 ntBASIC2.36□□□□□ -2.03
Ufd1P70362 Gm28474-201ENSMUST00000188501 315 ntBASIC2.36□□□□□ -2.03
Ufd1P70362 Gm7871-201ENSMUST00000195346 618 ntBASIC2.36□□□□□ -2.03
Ufd1P70362 Gtpbp4-ps6-201ENSMUST00000198160 292 ntBASIC2.36□□□□□ -2.03
Ufd1P70362 Gm18635-201ENSMUST00000199020 1060 ntBASIC2.36□□□□□ -2.03
Ufd1P70362 Igkv14-126-1-201ENSMUST00000199899 346 ntBASIC2.36□□□□□ -2.03
Ufd1P70362 Gm43955-201ENSMUST00000204332 142 ntBASIC2.36□□□□□ -2.03
Ufd1P70362 AC173115.1-201ENSMUST00000220835 211 ntBASIC2.36□□□□□ -2.03
Ufd1P70362 AC156560.1-201ENSMUST00000221425 256 ntBASIC2.36□□□□□ -2.03
Ufd1P70362 Gm34276-201ENSMUST00000222558 439 ntTSL 5 BASIC2.36□□□□□ -2.03
Ufd1P70362 AC102352.1-201ENSMUST00000224187 582 ntBASIC2.36□□□□□ -2.03
Ufd1P70362 Gm4945-201ENSMUST00000075152 453 ntBASIC2.36□□□□□ -2.03
Ufd1P70362 Defb39-201ENSMUST00000075504 252 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
Ufd1P70362 Vmn1r229-201ENSMUST00000076759 921 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
Ufd1P70362 Mir132-201ENSMUST00000083603 66 ntBASIC2.36□□□□□ -2.03
Ufd1P70362 Zfp280c-203ENSMUST00000088898 4024 ntAPPRIS P3 TSL 1 (best) BASIC2.36□□□□□ -2.03
Ufd1P70362 Olfr309-202ENSMUST00000174158 3293 ntAPPRIS P1 TSL 2 BASIC2.35□□□□□ -2.03
Ufd1P70362 Igkv14-111-201ENSMUST00000103320 368 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
Ufd1P70362 Trav6-7-dv9-201ENSMUST00000103638 379 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
Ufd1P70362 Gm23948-201ENSMUST00000104030 132 ntBASIC2.35□□□□□ -2.03
Ufd1P70362 Gm14897-201ENSMUST00000118213 207 ntBASIC2.35□□□□□ -2.03
Ufd1P70362 Gm15190-201ENSMUST00000120855 276 ntBASIC2.35□□□□□ -2.03
Ufd1P70362 Gm8880-201ENSMUST00000121800 454 ntBASIC2.35□□□□□ -2.03
Ufd1P70362 Gm15561-201ENSMUST00000124326 540 ntTSL 3 BASIC2.35□□□□□ -2.03
Ufd1P70362 Gm24784-201ENSMUST00000157640 62 ntBASIC2.35□□□□□ -2.03
Ufd1P70362 Gm23559-201ENSMUST00000157824 103 ntBASIC2.35□□□□□ -2.03
Ufd1P70362 Gm22726-201ENSMUST00000158089 179 ntBASIC2.35□□□□□ -2.03
Ufd1P70362 Gm22611-201ENSMUST00000158288 150 ntBASIC2.35□□□□□ -2.03
Ufd1P70362 Gm3111-201ENSMUST00000167426 490 ntBASIC2.35□□□□□ -2.03
Ufd1P70362 Gm17064-201ENSMUST00000167690 452 ntBASIC2.35□□□□□ -2.03
Ufd1P70362 Snord93-201ENSMUST00000175580 71 ntBASIC2.35□□□□□ -2.03
Ufd1P70362 Gm27374-201ENSMUST00000183660 81 ntBASIC2.35□□□□□ -2.03
Ufd1P70362 Mir7031-201ENSMUST00000183860 65 ntBASIC2.35□□□□□ -2.03
Ufd1P70362 Sly-201ENSMUST00000189109 797 ntAPPRIS ALT2 TSL 1 (best) BASIC2.35□□□□□ -2.03
Ufd1P70362 Gm28314-201ENSMUST00000191276 345 ntBASIC2.35□□□□□ -2.03
Ufd1P70362 Olfr289-ps1-201ENSMUST00000192834 369 ntBASIC2.35□□□□□ -2.03
Ufd1P70362 Gm37757-201ENSMUST00000193072 210 ntBASIC2.35□□□□□ -2.03
Ufd1P70362 Gm38146-201ENSMUST00000194121 1293 ntBASIC2.35□□□□□ -2.03
Ufd1P70362 Gm20304-201ENSMUST00000218168 444 ntBASIC2.35□□□□□ -2.03
Ufd1P70362 AC158803.1-201ENSMUST00000219495 316 ntBASIC2.35□□□□□ -2.03
Ufd1P70362 AC158798.1-201ENSMUST00000219714 711 ntTSL 5 BASIC2.35□□□□□ -2.03
Ufd1P70362 4930448F12Rik-201ENSMUST00000220795 859 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
Ufd1P70362 AC118639.1-204ENSMUST00000226401 694 ntBASIC2.35□□□□□ -2.03
Ufd1P70362 AC127578.1-201ENSMUST00000227289 93 ntBASIC2.35□□□□□ -2.03
Ufd1P70362 AC117202.3-201ENSMUST00000228532 310 ntBASIC2.35□□□□□ -2.03
Ufd1P70362 Defb10-201ENSMUST00000054162 298 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
Ufd1P70362 Olfr138-201ENSMUST00000071871 939 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
Ufd1P70362 Mir101b-201ENSMUST00000083622 97 ntBASIC2.35□□□□□ -2.03
Ufd1P70362 Rpl31-ps1-201ENSMUST00000085128 378 ntBASIC2.35□□□□□ -2.03
Retrieved 100 of 76,532 protein–RNA pairs in 79.7 ms