Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 5330434G04Rik-203ENSMUST00000142109 3449 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
Hmgb1P63158 Dmd-203ENSMUST00000114000 14910 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
Hmgb1P63158 Gm44164-201ENSMUST00000203605 2561 ntBASIC3.97□□□□□ -1.77
Hmgb1P63158 Gm15714-201ENSMUST00000117168 250 ntBASIC3.97□□□□□ -1.77
Hmgb1P63158 Gm14602-201ENSMUST00000118625 340 ntBASIC3.97□□□□□ -1.77
Hmgb1P63158 Gm14852-201ENSMUST00000120065 647 ntBASIC3.97□□□□□ -1.77
Hmgb1P63158 Gm22613-201ENSMUST00000122679 292 ntBASIC3.97□□□□□ -1.77
Hmgb1P63158 Gm15733-201ENSMUST00000132957 242 ntBASIC3.97□□□□□ -1.77
Hmgb1P63158 Gm22668-201ENSMUST00000158716 260 ntBASIC3.97□□□□□ -1.77
Hmgb1P63158 Ang-ps3-201ENSMUST00000177964 433 ntBASIC3.97□□□□□ -1.77
Hmgb1P63158 Mir713-201ENSMUST00000178651 108 ntBASIC3.97□□□□□ -1.77
Hmgb1P63158 Gm6801-201ENSMUST00000190697 339 ntBASIC3.97□□□□□ -1.77
Hmgb1P63158 Gm30341-201ENSMUST00000194363 289 ntBASIC3.97□□□□□ -1.77
Hmgb1P63158 2210017I01Rik-201ENSMUST00000195278 822 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
Hmgb1P63158 Gm43140-201ENSMUST00000197317 456 ntTSL 2 BASIC3.97□□□□□ -1.77
Hmgb1P63158 Igkv13-64-201ENSMUST00000198143 343 ntBASIC3.97□□□□□ -1.77
Hmgb1P63158 Olfr838-ps1-201ENSMUST00000211872 977 ntBASIC3.97□□□□□ -1.77
Hmgb1P63158 AC134537.3-201ENSMUST00000220154 503 ntTSL 3 BASIC3.97□□□□□ -1.77
Hmgb1P63158 AC127270.2-201ENSMUST00000221337 247 ntBASIC3.97□□□□□ -1.77
Hmgb1P63158 Gm3829-201ENSMUST00000222362 619 ntBASIC3.97□□□□□ -1.77
Hmgb1P63158 AC116656.1-201ENSMUST00000227040 755 ntBASIC3.97□□□□□ -1.77
Hmgb1P63158 Tslp-201ENSMUST00000025237 1133 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
Hmgb1P63158 Gm3259-201ENSMUST00000101015 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.97□□□□□ -1.77
Hmgb1P63158 Vmn1r13-204ENSMUST00000227421 5235 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
Hmgb1P63158 Tbx22-201ENSMUST00000068451 2947 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
Hmgb1P63158 Gm42888-201ENSMUST00000202425 4361 ntBASIC3.97□□□□□ -1.77
Hmgb1P63158 Olfr1105-202ENSMUST00000215978 3012 ntAPPRIS P1 TSL 3 BASIC3.97□□□□□ -1.77
Hmgb1P63158 Gm5596-201ENSMUST00000207988 2421 ntBASIC3.96□□□□□ -1.77
Hmgb1P63158 Olfr912-201ENSMUST00000217160 5726 ntAPPRIS P1 TSL 2 BASIC3.96□□□□□ -1.77
Hmgb1P63158 Vmn2r-ps83-201ENSMUST00000173787 2368 ntBASIC3.96□□□□□ -1.78
Hmgb1P63158 Trav14d-2-201ENSMUST00000103597 276 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
Hmgb1P63158 Trav14n-2-201ENSMUST00000103623 276 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
Hmgb1P63158 Gm8858-201ENSMUST00000118259 342 ntBASIC3.96□□□□□ -1.78
Hmgb1P63158 Gm13601-201ENSMUST00000142314 404 ntTSL 3 BASIC3.96□□□□□ -1.78
Hmgb1P63158 Gm24914-201ENSMUST00000157285 313 ntBASIC3.96□□□□□ -1.78
Hmgb1P63158 Gm18520-201ENSMUST00000174783 658 ntBASIC3.96□□□□□ -1.78
Hmgb1P63158 Trav7-3-201ENSMUST00000177622 402 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
Hmgb1P63158 Mir7031-201ENSMUST00000183860 65 ntBASIC3.96□□□□□ -1.78
Hmgb1P63158 Gm27957-201ENSMUST00000184054 127 ntBASIC3.96□□□□□ -1.78
Hmgb1P63158 Trav14-2-202ENSMUST00000184874 276 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
Hmgb1P63158 Gm23370-202ENSMUST00000197008 129 ntBASIC3.96□□□□□ -1.78
Hmgb1P63158 Gm17951-201ENSMUST00000198536 496 ntBASIC3.96□□□□□ -1.78
Hmgb1P63158 Igkv2-95-1-201ENSMUST00000200279 272 ntBASIC3.96□□□□□ -1.78
Hmgb1P63158 Gm44425-201ENSMUST00000203739 429 ntBASIC3.96□□□□□ -1.78
Hmgb1P63158 Gm38944-201ENSMUST00000208218 512 ntTSL 2 BASIC3.96□□□□□ -1.78
Hmgb1P63158 Olfr1086-202ENSMUST00000213198 1153 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
Hmgb1P63158 AC174457.1-201ENSMUST00000215932 226 ntBASIC3.96□□□□□ -1.78
Hmgb1P63158 Lilr4b-211ENSMUST00000219661 1143 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Hmgb1P63158 Rpl31-ps2-201ENSMUST00000223231 343 ntBASIC3.96□□□□□ -1.78
Hmgb1P63158 AC124729.1-201ENSMUST00000225327 976 ntBASIC3.96□□□□□ -1.78
Hmgb1P63158 Gm25859-201ENSMUST00000083710 91 ntBASIC3.96□□□□□ -1.78
Hmgb1P63158 Olfr577-202ENSMUST00000214080 3282 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
Hmgb1P63158 Olfr267-202ENSMUST00000216719 4050 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
Hmgb1P63158 Nexn-207ENSMUST00000198460 1785 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
Hmgb1P63158 Plek-202ENSMUST00000102881 4101 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
Hmgb1P63158 Vmn1r69-201ENSMUST00000163658 2558 ntAPPRIS P2 BASIC3.96□□□□□ -1.78
Hmgb1P63158 Gm37999-201ENSMUST00000195178 1809 ntBASIC3.95□□□□□ -1.78
Hmgb1P63158 Zfp600-204ENSMUST00000168483 4244 ntAPPRIS P1 TSL 2 BASIC3.95□□□□□ -1.78
Hmgb1P63158 Gm29730-201ENSMUST00000192986 1396 ntBASIC3.95□□□□□ -1.78
Hmgb1P63158 Trbv21-201ENSMUST00000103278 290 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
Hmgb1P63158 Gm9009-201ENSMUST00000117321 326 ntBASIC3.95□□□□□ -1.78
Hmgb1P63158 Gm15497-201ENSMUST00000119137 551 ntBASIC3.95□□□□□ -1.78
Hmgb1P63158 Gm14843-201ENSMUST00000119596 212 ntBASIC3.95□□□□□ -1.78
Hmgb1P63158 Mup-ps17-201ENSMUST00000120723 218 ntBASIC3.95□□□□□ -1.78
Hmgb1P63158 Gm8580-201ENSMUST00000160295 464 ntBASIC3.95□□□□□ -1.78
Hmgb1P63158 Ighv1-77-201ENSMUST00000170551 294 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
Hmgb1P63158 Gm20399-201ENSMUST00000174652 132 ntBASIC3.95□□□□□ -1.78
Hmgb1P63158 Gm23799-201ENSMUST00000175559 120 ntBASIC3.95□□□□□ -1.78
Hmgb1P63158 Obox4-ps8-201ENSMUST00000175831 714 ntBASIC3.95□□□□□ -1.78
Hmgb1P63158 Gm21776-201ENSMUST00000177676 1083 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
Hmgb1P63158 Mir7074-201ENSMUST00000183884 63 ntBASIC3.95□□□□□ -1.78
Hmgb1P63158 Gm37791-201ENSMUST00000195081 286 ntBASIC3.95□□□□□ -1.78
Hmgb1P63158 Gm567-201ENSMUST00000197127 469 ntTSL 3 BASIC3.95□□□□□ -1.78
Hmgb1P63158 Gm43286-201ENSMUST00000197420 424 ntBASIC3.95□□□□□ -1.78
Hmgb1P63158 Gm26263-201ENSMUST00000083281 164 ntBASIC3.95□□□□□ -1.78
Hmgb1P63158 4932414N04Rik-201ENSMUST00000055930 3519 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Hmgb1P63158 Gm42768-201ENSMUST00000197734 2897 ntBASIC3.94□□□□□ -1.78
Hmgb1P63158 Wnk3-205ENSMUST00000184392 5394 ntAPPRIS P4 TSL 1 (best) BASIC3.94□□□□□ -1.78
Hmgb1P63158 Olfr1448-202ENSMUST00000213177 3979 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
Hmgb1P63158 Gm3867-202ENSMUST00000181639 2007 ntTSL 2 BASIC3.94□□□□□ -1.78
Hmgb1P63158 AC124426.1-203ENSMUST00000221814 1362 ntBASIC3.94□□□□□ -1.78
Hmgb1P63158 Trbv13-1-201ENSMUST00000103268 334 ntAPPRIS ALT2 BASIC3.94□□□□□ -1.78
Hmgb1P63158 Gm22270-201ENSMUST00000104034 132 ntBASIC3.94□□□□□ -1.78
Hmgb1P63158 Gm23273-201ENSMUST00000104058 135 ntBASIC3.94□□□□□ -1.78
Hmgb1P63158 Gm22779-201ENSMUST00000104085 107 ntBASIC3.94□□□□□ -1.78
Hmgb1P63158 Gm6096-201ENSMUST00000105172 456 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
Hmgb1P63158 Gm13876-201ENSMUST00000118451 261 ntBASIC3.94□□□□□ -1.78
Hmgb1P63158 Gm14753-201ENSMUST00000118503 246 ntBASIC3.94□□□□□ -1.78
Hmgb1P63158 Gm14013-201ENSMUST00000119006 270 ntBASIC3.94□□□□□ -1.78
Hmgb1P63158 Gm11704-201ENSMUST00000120031 214 ntBASIC3.94□□□□□ -1.78
Hmgb1P63158 Gm7916-201ENSMUST00000120325 456 ntBASIC3.94□□□□□ -1.78
Hmgb1P63158 Gm22204-201ENSMUST00000122654 327 ntBASIC3.94□□□□□ -1.78
Hmgb1P63158 Gm14684-201ENSMUST00000145722 123 ntTSL 5 BASIC3.94□□□□□ -1.78
Hmgb1P63158 Gm11917-201ENSMUST00000154813 373 ntTSL 2 BASIC3.94□□□□□ -1.78
Hmgb1P63158 Gm25438-201ENSMUST00000158281 110 ntBASIC3.94□□□□□ -1.78
Hmgb1P63158 Gm16290-201ENSMUST00000161175 474 ntBASIC3.94□□□□□ -1.78
Hmgb1P63158 Gm21797-201ENSMUST00000177579 543 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
Hmgb1P63158 Gm21767-201ENSMUST00000178689 543 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
Hmgb1P63158 Gm21822-201ENSMUST00000179302 543 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
Hmgb1P63158 Gm26991-201ENSMUST00000180950 620 ntBASIC3.94□□□□□ -1.78
Retrieved 100 of 76,532 protein–RNA pairs in 81.8 ms