Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 2610300M13Rik-202ENSMUST00000203716 1787 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
Shmt1P50431 Arhgef6-202ENSMUST00000114735 1614 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
Shmt1P50431 Gm14429-201ENSMUST00000121881 2024 ntBASIC3.99□□□□□ -1.77
Shmt1P50431 Olfr1366-202ENSMUST00000175637 3045 ntAPPRIS ALT2 TSL 3 BASIC3.99□□□□□ -1.77
Shmt1P50431 Vmn2r91-201ENSMUST00000172359 2571 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Shmt1P50431 Mmp1b-201ENSMUST00000047888 1449 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Shmt1P50431 Gm25764-201ENSMUST00000104092 134 ntBASIC3.99□□□□□ -1.77
Shmt1P50431 Scgb1b24-201ENSMUST00000108087 279 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Shmt1P50431 Gm14880-201ENSMUST00000117581 292 ntBASIC3.99□□□□□ -1.77
Shmt1P50431 Gm15268-201ENSMUST00000118845 352 ntBASIC3.99□□□□□ -1.77
Shmt1P50431 Gm12458-201ENSMUST00000119387 495 ntBASIC3.99□□□□□ -1.77
Shmt1P50431 Gm15377-201ENSMUST00000119594 246 ntBASIC3.99□□□□□ -1.77
Shmt1P50431 Gm16068-201ENSMUST00000136557 504 ntTSL 3 BASIC3.99□□□□□ -1.77
Shmt1P50431 Gm13307-201ENSMUST00000141375 493 ntTSL 5 BASIC3.99□□□□□ -1.77
Shmt1P50431 Gm24244-201ENSMUST00000157317 130 ntBASIC3.99□□□□□ -1.77
Shmt1P50431 Gm22840-201ENSMUST00000158444 136 ntBASIC3.99□□□□□ -1.77
Shmt1P50431 Gm24553-201ENSMUST00000158653 131 ntBASIC3.99□□□□□ -1.77
Shmt1P50431 Gm28500-201ENSMUST00000190286 151 ntBASIC3.99□□□□□ -1.77
Shmt1P50431 Gm37568-201ENSMUST00000191755 364 ntBASIC3.99□□□□□ -1.77
Shmt1P50431 Gm32033-201ENSMUST00000193483 339 ntBASIC3.99□□□□□ -1.77
Shmt1P50431 Gm28724-202ENSMUST00000194218 295 ntBASIC3.99□□□□□ -1.77
Shmt1P50431 Gtpbp4-ps6-201ENSMUST00000198160 292 ntBASIC3.99□□□□□ -1.77
Shmt1P50431 Gm44294-201ENSMUST00000205090 728 ntBASIC3.99□□□□□ -1.77
Shmt1P50431 AC129202.3-201ENSMUST00000224413 733 ntBASIC3.99□□□□□ -1.77
Shmt1P50431 AC124581.4-201ENSMUST00000225874 463 ntBASIC3.99□□□□□ -1.77
Shmt1P50431 Olfr152-201ENSMUST00000090709 951 ntAPPRIS P2 BASIC3.99□□□□□ -1.77
Shmt1P50431 Btbd35f3-201ENSMUST00000140300 1943 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
Shmt1P50431 Gm45093-201ENSMUST00000206859 2463 ntBASIC3.99□□□□□ -1.77
Shmt1P50431 Olfr1231-202ENSMUST00000216144 3961 ntAPPRIS P1 TSL 3 BASIC3.99□□□□□ -1.77
Shmt1P50431 Vmn2r32-201ENSMUST00000094866 3513 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Shmt1P50431 Gm20345-201ENSMUST00000175839 2414 ntBASIC3.99□□□□□ -1.77
Shmt1P50431 Gm11284-201ENSMUST00000121910 1887 ntBASIC3.98□□□□□ -1.77
Shmt1P50431 Gm43736-201ENSMUST00000196377 2281 ntBASIC3.98□□□□□ -1.77
Shmt1P50431 Gm5362-201ENSMUST00000211968 3085 ntBASIC3.98□□□□□ -1.77
Shmt1P50431 D3Ertd254e-201ENSMUST00000165956 6503 ntTSL 3 BASIC3.98□□□□□ -1.77
Shmt1P50431 Olfr919-202ENSMUST00000215612 1992 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
Shmt1P50431 Olfr1042-202ENSMUST00000215624 5096 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
Shmt1P50431 Gm15844-201ENSMUST00000118016 576 ntBASIC3.98□□□□□ -1.77
Shmt1P50431 Gm12118-201ENSMUST00000119766 532 ntBASIC3.98□□□□□ -1.77
Shmt1P50431 Gm8880-201ENSMUST00000121800 454 ntBASIC3.98□□□□□ -1.77
Shmt1P50431 Gm22891-201ENSMUST00000158641 164 ntBASIC3.98□□□□□ -1.77
Shmt1P50431 Gm26005-201ENSMUST00000158802 134 ntBASIC3.98□□□□□ -1.77
Shmt1P50431 Gm24976-201ENSMUST00000158972 135 ntBASIC3.98□□□□□ -1.77
Shmt1P50431 Gm20399-201ENSMUST00000174652 132 ntBASIC3.98□□□□□ -1.77
Shmt1P50431 Gm24520-201ENSMUST00000179510 110 ntBASIC3.98□□□□□ -1.77
Shmt1P50431 Gm27392-201ENSMUST00000185041 101 ntBASIC3.98□□□□□ -1.77
Shmt1P50431 Gm19243-201ENSMUST00000198592 269 ntBASIC3.98□□□□□ -1.77
Shmt1P50431 Gm35876-201ENSMUST00000205044 459 ntBASIC3.98□□□□□ -1.77
Shmt1P50431 Olfr278-ps1-201ENSMUST00000205676 238 ntBASIC3.98□□□□□ -1.77
Shmt1P50431 Gm44853-201ENSMUST00000209070 250 ntBASIC3.98□□□□□ -1.77
Shmt1P50431 AC163033.1-201ENSMUST00000218608 157 ntBASIC3.98□□□□□ -1.77
Shmt1P50431 AC160865.1-201ENSMUST00000219873 151 ntBASIC3.98□□□□□ -1.77
Shmt1P50431 2900042G08Rik-201ENSMUST00000221776 650 ntBASIC3.98□□□□□ -1.77
Shmt1P50431 Gm21937-201ENSMUST00000222825 218 ntBASIC3.98□□□□□ -1.77
Shmt1P50431 AC154576.2-202ENSMUST00000223916 688 ntBASIC3.98□□□□□ -1.77
Shmt1P50431 CT010454.1-201ENSMUST00000225975 265 ntBASIC3.98□□□□□ -1.77
Shmt1P50431 AC133156.1-202ENSMUST00000227284 363 ntBASIC3.98□□□□□ -1.77
Shmt1P50431 Snord14e-201ENSMUST00000082857 90 ntBASIC3.98□□□□□ -1.77
Shmt1P50431 Gm43834-201ENSMUST00000197097 4830 ntBASIC3.98□□□□□ -1.77
Shmt1P50431 Gm37498-201ENSMUST00000193524 4002 ntBASIC3.98□□□□□ -1.77
Shmt1P50431 AC137842.3-201ENSMUST00000228855 2397 ntBASIC3.98□□□□□ -1.77
Shmt1P50431 Olfr215-201ENSMUST00000061723 4112 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
Shmt1P50431 Enam-202ENSMUST00000199104 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
Shmt1P50431 Nlrp4c-201ENSMUST00000037728 3615 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
Shmt1P50431 Olfr101-203ENSMUST00000215392 2899 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
Shmt1P50431 Olfr199-202ENSMUST00000214186 2728 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
Shmt1P50431 Igkv1-131-201ENSMUST00000103306 362 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
Shmt1P50431 Snord98-201ENSMUST00000116819 65 ntBASIC3.97□□□□□ -1.77
Shmt1P50431 Gm13122-201ENSMUST00000118380 453 ntBASIC3.97□□□□□ -1.77
Shmt1P50431 Smt3h2-ps4-201ENSMUST00000121569 288 ntBASIC3.97□□□□□ -1.77
Shmt1P50431 Gm16155-201ENSMUST00000155180 338 ntTSL 3 BASIC3.97□□□□□ -1.77
Shmt1P50431 Gm16353-201ENSMUST00000159458 1223 ntBASIC3.97□□□□□ -1.77
Shmt1P50431 Tcrg-C3-201ENSMUST00000164407 519 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
Shmt1P50431 Gm28010-201ENSMUST00000179485 126 ntBASIC3.97□□□□□ -1.77
Shmt1P50431 Mir6408-201ENSMUST00000183643 91 ntBASIC3.97□□□□□ -1.77
Shmt1P50431 Gm29327-201ENSMUST00000188229 388 ntTSL 5 BASIC3.97□□□□□ -1.77
Shmt1P50431 Gm19498-201ENSMUST00000191128 331 ntBASIC3.97□□□□□ -1.77
Shmt1P50431 Gm37128-201ENSMUST00000192599 232 ntBASIC3.97□□□□□ -1.77
Shmt1P50431 Gm15927-204ENSMUST00000206075 372 ntTSL 3 BASIC3.97□□□□□ -1.77
Shmt1P50431 CT030182.3-201ENSMUST00000225986 582 ntBASIC3.97□□□□□ -1.77
Shmt1P50431 Gm2710-201ENSMUST00000073196 603 ntBASIC3.97□□□□□ -1.77
Shmt1P50431 Snora7a-201ENSMUST00000082629 140 ntBASIC3.97□□□□□ -1.77
Shmt1P50431 Rny1-201ENSMUST00000083767 112 ntBASIC3.97□□□□□ -1.77
Shmt1P50431 Gm28465-202ENSMUST00000220779 1701 ntTSL 5 BASIC3.97□□□□□ -1.77
Shmt1P50431 Olfr1051-202ENSMUST00000216432 2807 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
Shmt1P50431 Olfr1051-203ENSMUST00000217245 2821 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
Shmt1P50431 Olfr1051-204ENSMUST00000217294 2840 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
Shmt1P50431 Gm42447-201ENSMUST00000200102 2903 ntBASIC3.97□□□□□ -1.77
Shmt1P50431 Olfr1143-202ENSMUST00000099852 2028 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
Shmt1P50431 Vmn2r76-201ENSMUST00000165771 2562 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
Shmt1P50431 Gm43824-201ENSMUST00000199042 2588 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
Shmt1P50431 Olfr792-202ENSMUST00000215436 2113 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
Shmt1P50431 Olfr898-202ENSMUST00000216304 3979 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.77
Shmt1P50431 Vmn1r47-202ENSMUST00000227229 6733 ntAPPRIS P1 BASIC3.96□□□□□ -1.77
Shmt1P50431 Vmn1r47-204ENSMUST00000228680 6717 ntAPPRIS P1 BASIC3.96□□□□□ -1.77
Shmt1P50431 Rbbp8-202ENSMUST00000115861 3523 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
Shmt1P50431 Vmn1r71-205ENSMUST00000227940 4725 ntAPPRIS P2 BASIC3.96□□□□□ -1.77
Shmt1P50431 Lrrtm2-201ENSMUST00000091636 5665 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
Shmt1P50431 Chst9-201ENSMUST00000053017 1620 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
Shmt1P50431 Olfr905-202ENSMUST00000214377 4429 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
Retrieved 100 of 76,532 protein–RNA pairs in 76.3 ms