Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Csn1s2b-202ENSMUST00000101057 1668 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Rfx1P48377 Olfr113-201ENSMUST00000216181 1671 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Rfx1P48377 Olfr388-ps1-201ENSMUST00000118336 2129 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Rfx1P48377 Olfr2-203ENSMUST00000208147 6178 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Rfx1P48377 Gm36298-201ENSMUST00000223394 1732 ntBASIC5.01□□□□□ -1.61
Rfx1P48377 Ccnb3-202ENSMUST00000115752 4554 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Rfx1P48377 Igkv9-124-201ENSMUST00000103312 287 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Rfx1P48377 Gm22389-201ENSMUST00000158193 301 ntBASIC5.01□□□□□ -1.61
Rfx1P48377 Gm29232-201ENSMUST00000189100 297 ntTSL 5 BASIC5.01□□□□□ -1.61
Rfx1P48377 Gm28920-201ENSMUST00000189957 699 ntBASIC5.01□□□□□ -1.61
Rfx1P48377 Gm37801-201ENSMUST00000194754 274 ntBASIC5.01□□□□□ -1.61
Rfx1P48377 Gm6135-201ENSMUST00000198726 372 ntTSL 2 BASIC5.01□□□□□ -1.61
Rfx1P48377 Gm43309-201ENSMUST00000200837 458 ntBASIC5.01□□□□□ -1.61
Rfx1P48377 Gm44657-201ENSMUST00000208568 450 ntBASIC5.01□□□□□ -1.61
Rfx1P48377 Gm9616-201ENSMUST00000221154 781 ntBASIC5.01□□□□□ -1.61
Rfx1P48377 AC123705.4-202ENSMUST00000221602 697 ntTSL 2 BASIC5.01□□□□□ -1.61
Rfx1P48377 LOC667541-201ENSMUST00000223408 278 ntBASIC5.01□□□□□ -1.61
Rfx1P48377 Rps15a-ps1-201ENSMUST00000071120 393 ntBASIC5.01□□□□□ -1.61
Rfx1P48377 Mir17-201ENSMUST00000083574 84 ntBASIC5.01□□□□□ -1.61
Rfx1P48377 AI314180-203ENSMUST00000107557 4946 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
Rfx1P48377 Gm36989-201ENSMUST00000193225 2160 ntBASIC5.01□□□□□ -1.61
Rfx1P48377 Gm14308-201ENSMUST00000108990 1628 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
Rfx1P48377 Olfr1331-202ENSMUST00000106360 3230 ntAPPRIS P2 TSL 5 BASIC5.01□□□□□ -1.61
Rfx1P48377 Ptprz1-201ENSMUST00000090568 8068 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
Rfx1P48377 Tfpi-205ENSMUST00000111717 2962 ntTSL 5 BASIC5□□□□□ -1.61
Rfx1P48377 Stk31-202ENSMUST00000163954 2988 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
Rfx1P48377 Gm45557-201ENSMUST00000210004 1651 ntBASIC5□□□□□ -1.61
Rfx1P48377 Gm37625-201ENSMUST00000194969 4872 ntBASIC5□□□□□ -1.61
Rfx1P48377 Gm22473-201ENSMUST00000104114 132 ntBASIC5□□□□□ -1.61
Rfx1P48377 Gm26019-201ENSMUST00000104407 119 ntBASIC5□□□□□ -1.61
Rfx1P48377 Rps12-ps26-201ENSMUST00000117751 333 ntBASIC5□□□□□ -1.61
Rfx1P48377 Gm16128-201ENSMUST00000117855 626 ntBASIC5□□□□□ -1.61
Rfx1P48377 Gm12646-201ENSMUST00000119144 238 ntBASIC5□□□□□ -1.61
Rfx1P48377 Gm15926-201ENSMUST00000120492 550 ntBASIC5□□□□□ -1.61
Rfx1P48377 Gm13692-201ENSMUST00000120774 371 ntBASIC5□□□□□ -1.61
Rfx1P48377 Gm24729-201ENSMUST00000158225 137 ntBASIC5□□□□□ -1.61
Rfx1P48377 Gm24501-201ENSMUST00000158452 62 ntBASIC5□□□□□ -1.61
Rfx1P48377 Gm26979-201ENSMUST00000182971 217 ntTSL 3 BASIC5□□□□□ -1.61
Rfx1P48377 Trav7-5-201ENSMUST00000200609 337 ntAPPRIS P1 BASIC5□□□□□ -1.61
Rfx1P48377 Gm10445-201ENSMUST00000203521 762 ntTSL 2 BASIC5□□□□□ -1.61
Rfx1P48377 Gm45006-201ENSMUST00000206078 690 ntBASIC5□□□□□ -1.61
Rfx1P48377 Gm45678-201ENSMUST00000210509 295 ntBASIC5□□□□□ -1.61
Rfx1P48377 Gm37211-201ENSMUST00000193392 3433 ntBASIC5□□□□□ -1.61
Rfx1P48377 Zfp759-201ENSMUST00000052716 3482 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Rfx1P48377 Gm3636-202ENSMUST00000163850 1746 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
Rfx1P48377 Vmn1r90-207ENSMUST00000227692 7101 ntAPPRIS P2 BASIC5□□□□□ -1.61
Rfx1P48377 Vmn1r77-203ENSMUST00000227320 8308 ntAPPRIS P2 BASIC5□□□□□ -1.61
Rfx1P48377 Olfr1016-202ENSMUST00000216425 2698 ntAPPRIS P1 TSL 3 BASIC5□□□□□ -1.61
Rfx1P48377 Vmn1r185-212ENSMUST00000228633 5385 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Rfx1P48377 Btla-201ENSMUST00000063654 3235 ntAPPRIS P4 TSL 1 (best) BASIC4.99□□□□□ -1.61
Rfx1P48377 Gm17067-201ENSMUST00000166837 3673 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
Rfx1P48377 Zfp266-202ENSMUST00000174462 6283 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Rfx1P48377 Abi3bp-204ENSMUST00000171000 3877 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
Rfx1P48377 AC140397.1-201ENSMUST00000225563 4562 ntBASIC4.99□□□□□ -1.61
Rfx1P48377 Arhgap5-202ENSMUST00000217820 2332 ntTSL 5 BASIC4.99□□□□□ -1.61
Rfx1P48377 Gm24079-201ENSMUST00000104352 132 ntBASIC4.99□□□□□ -1.61
Rfx1P48377 Gm25316-201ENSMUST00000116826 118 ntBASIC4.99□□□□□ -1.61
Rfx1P48377 Psmb7-ps2-201ENSMUST00000118546 820 ntBASIC4.99□□□□□ -1.61
Rfx1P48377 Gm14352-201ENSMUST00000119250 449 ntBASIC4.99□□□□□ -1.61
Rfx1P48377 Rpl23a-ps6-201ENSMUST00000119466 468 ntBASIC4.99□□□□□ -1.61
Rfx1P48377 Gm22036-201ENSMUST00000157279 215 ntBASIC4.99□□□□□ -1.61
Rfx1P48377 Gm25391-201ENSMUST00000157342 134 ntBASIC4.99□□□□□ -1.61
Rfx1P48377 Gm17416-201ENSMUST00000163724 201 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Rfx1P48377 Vmn1r-ps40-201ENSMUST00000172862 343 ntBASIC4.99□□□□□ -1.61
Rfx1P48377 Mir6355-201ENSMUST00000183687 106 ntBASIC4.99□□□□□ -1.61
Rfx1P48377 Gm27718-201ENSMUST00000183721 86 ntBASIC4.99□□□□□ -1.61
Rfx1P48377 Gm7329-201ENSMUST00000185915 210 ntBASIC4.99□□□□□ -1.61
Rfx1P48377 Gm29147-201ENSMUST00000186846 315 ntBASIC4.99□□□□□ -1.61
Rfx1P48377 Gm29227-201ENSMUST00000187139 315 ntBASIC4.99□□□□□ -1.61
Rfx1P48377 Gm29034-201ENSMUST00000188099 315 ntBASIC4.99□□□□□ -1.61
Rfx1P48377 Gm28954-201ENSMUST00000190031 437 ntTSL 5 BASIC4.99□□□□□ -1.61
Rfx1P48377 Gm28072-202ENSMUST00000190486 352 ntTSL 5 BASIC4.99□□□□□ -1.61
Rfx1P48377 Gm28160-201ENSMUST00000191229 315 ntBASIC4.99□□□□□ -1.61
Rfx1P48377 Gm31942-202ENSMUST00000195375 437 ntTSL 5 BASIC4.99□□□□□ -1.61
Rfx1P48377 Gm37129-201ENSMUST00000195791 315 ntBASIC4.99□□□□□ -1.61
Rfx1P48377 Gm44009-201ENSMUST00000203539 521 ntTSL 5 BASIC4.99□□□□□ -1.61
Rfx1P48377 Gm44085-201ENSMUST00000205056 372 ntTSL 3 BASIC4.99□□□□□ -1.61
Rfx1P48377 Gm45236-201ENSMUST00000208632 229 ntBASIC4.99□□□□□ -1.61
Rfx1P48377 AC158622.1-201ENSMUST00000217107 230 ntBASIC4.99□□□□□ -1.61
Rfx1P48377 AC166056.1-201ENSMUST00000223139 441 ntTSL 5 BASIC4.99□□□□□ -1.61
Rfx1P48377 Gm25147-201ENSMUST00000083030 105 ntBASIC4.99□□□□□ -1.61
Rfx1P48377 Mir99a-201ENSMUST00000083596 65 ntBASIC4.99□□□□□ -1.61
Rfx1P48377 Gm26329-201ENSMUST00000093723 110 ntBASIC4.99□□□□□ -1.61
Rfx1P48377 Nap1l1-202ENSMUST00000171797 3926 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Rfx1P48377 Nap1l1-204ENSMUST00000218828 3934 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Rfx1P48377 Olfr844-202ENSMUST00000220268 1686 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
Rfx1P48377 Neto2-201ENSMUST00000109686 5610 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Rfx1P48377 AC155921.1-201ENSMUST00000216568 3841 ntBASIC4.98□□□□□ -1.61
Rfx1P48377 Atad1-201ENSMUST00000070210 2813 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Rfx1P48377 Serpinb3a-202ENSMUST00000112717 1611 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Rfx1P48377 Trbj1-4-201ENSMUST00000103287 51 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
Rfx1P48377 Gm15783-201ENSMUST00000117521 633 ntBASIC4.98□□□□□ -1.61
Rfx1P48377 Gm11366-201ENSMUST00000119279 429 ntBASIC4.98□□□□□ -1.61
Rfx1P48377 Gm14119-201ENSMUST00000119511 235 ntBASIC4.98□□□□□ -1.61
Rfx1P48377 Rps15a-ps3-201ENSMUST00000121072 395 ntBASIC4.98□□□□□ -1.61
Rfx1P48377 Gm12693-201ENSMUST00000121965 483 ntBASIC4.98□□□□□ -1.61
Rfx1P48377 Gm12956-201ENSMUST00000122184 414 ntBASIC4.98□□□□□ -1.61
Rfx1P48377 Nell1os-202ENSMUST00000136672 491 ntTSL 5 BASIC4.98□□□□□ -1.61
Rfx1P48377 Gm26310-201ENSMUST00000157766 117 ntBASIC4.98□□□□□ -1.61
Rfx1P48377 Gm22156-201ENSMUST00000158409 141 ntBASIC4.98□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 97.1 ms