Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Gm28553-201ENSMUST00000185924 923 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
Cdx2P43241 Gm20908-201ENSMUST00000186004 922 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
Cdx2P43241 Gm20906-201ENSMUST00000186493 923 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
Cdx2P43241 Gm20929-201ENSMUST00000186578 923 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
Cdx2P43241 Gm21518-202ENSMUST00000186938 922 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
Cdx2P43241 Gm20855-202ENSMUST00000186996 924 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
Cdx2P43241 Gm20911-201ENSMUST00000187135 924 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
Cdx2P43241 Gm28102-201ENSMUST00000187146 924 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
Cdx2P43241 Gm28827-201ENSMUST00000187165 923 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
Cdx2P43241 Gm20931-202ENSMUST00000187293 922 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
Cdx2P43241 Gm21760-202ENSMUST00000187433 923 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
Cdx2P43241 Gm20920-201ENSMUST00000187477 922 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
Cdx2P43241 Gm21627-201ENSMUST00000187768 918 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
Cdx2P43241 9830004L10Rik-202ENSMUST00000188074 687 ntTSL 5 BASIC1.91□□□□□ -2.1
Cdx2P43241 Gm20850-201ENSMUST00000188672 924 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
Cdx2P43241 Gm21488-201ENSMUST00000188744 923 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
Cdx2P43241 Gm20820-201ENSMUST00000188754 921 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
Cdx2P43241 Gm20894-201ENSMUST00000188864 923 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
Cdx2P43241 Gm20869-201ENSMUST00000188958 924 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
Cdx2P43241 Gm21173-201ENSMUST00000189238 923 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
Cdx2P43241 Gm20870-201ENSMUST00000189315 922 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
Cdx2P43241 Gm20903-201ENSMUST00000189346 923 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
Cdx2P43241 Gm21209-202ENSMUST00000189354 922 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
Cdx2P43241 Gm20937-203ENSMUST00000189422 923 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
Cdx2P43241 Gm20890-201ENSMUST00000189518 923 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
Cdx2P43241 Gm21477-202ENSMUST00000189543 924 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
Cdx2P43241 Gm29110-201ENSMUST00000189924 922 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
Cdx2P43241 Gm20814-201ENSMUST00000190173 922 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
Cdx2P43241 Gm29573-201ENSMUST00000190291 919 ntBASIC1.91□□□□□ -2.1
Cdx2P43241 Sly-202ENSMUST00000190292 922 ntAPPRIS P2 TSL 1 (best) BASIC1.91□□□□□ -2.1
Cdx2P43241 Gm21650-202ENSMUST00000190551 923 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
Cdx2P43241 Gm28951-201ENSMUST00000190742 313 ntBASIC1.91□□□□□ -2.1
Cdx2P43241 Gm20905-201ENSMUST00000190782 923 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
Cdx2P43241 Gm20817-201ENSMUST00000191123 923 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
Cdx2P43241 Gm20843-202ENSMUST00000191305 925 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
Cdx2P43241 Gm21258-202ENSMUST00000191553 923 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
Cdx2P43241 Gm29866-201ENSMUST00000191675 923 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
Cdx2P43241 Gm31571-201ENSMUST00000192521 922 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
Cdx2P43241 Gm21366-201ENSMUST00000192892 923 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
Cdx2P43241 Gm32033-201ENSMUST00000193483 339 ntBASIC1.91□□□□□ -2.1
Cdx2P43241 Olfr192-202ENSMUST00000205727 1141 ntAPPRIS P1 TSL 2 BASIC1.91□□□□□ -2.1
Cdx2P43241 Gm45341-201ENSMUST00000210850 1104 ntTSL 5 BASIC1.91□□□□□ -2.1
Cdx2P43241 Gm37797-201ENSMUST00000212114 815 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
Cdx2P43241 AC151843.1-201ENSMUST00000215960 691 ntBASIC1.91□□□□□ -2.1
Cdx2P43241 AC154828.2-201ENSMUST00000220908 1070 ntBASIC1.91□□□□□ -2.1
Cdx2P43241 AC154636.3-201ENSMUST00000221489 1214 ntBASIC1.91□□□□□ -2.1
Cdx2P43241 AC101945.3-201ENSMUST00000226568 153 ntBASIC1.91□□□□□ -2.1
Cdx2P43241 Tas2r139-201ENSMUST00000057686 960 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
Cdx2P43241 Tas2r123-201ENSMUST00000071696 1002 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
Cdx2P43241 Gm10147-201ENSMUST00000075388 864 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
Cdx2P43241 Defb39-201ENSMUST00000075504 252 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
Cdx2P43241 Olfr1048-201ENSMUST00000099900 963 ntAPPRIS P2 BASIC1.91□□□□□ -2.1
Cdx2P43241 Trdn-201ENSMUST00000095762 4514 ntAPPRIS P2 TSL 5 BASIC1.9□□□□□ -2.1
Cdx2P43241 Gm23766-201ENSMUST00000103894 80 ntBASIC1.9□□□□□ -2.11
Cdx2P43241 Gm15844-201ENSMUST00000118016 576 ntBASIC1.9□□□□□ -2.11
Cdx2P43241 Gm14517-201ENSMUST00000119040 337 ntBASIC1.9□□□□□ -2.11
Cdx2P43241 Gm13541-201ENSMUST00000119519 283 ntBASIC1.9□□□□□ -2.11
Cdx2P43241 Gm11252-201ENSMUST00000120572 939 ntBASIC1.9□□□□□ -2.11
Cdx2P43241 Gm25339-201ENSMUST00000157458 232 ntBASIC1.9□□□□□ -2.11
Cdx2P43241 Gm24002-201ENSMUST00000158456 104 ntBASIC1.9□□□□□ -2.11
Cdx2P43241 Gm5916-201ENSMUST00000168452 1142 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
Cdx2P43241 Vmn2r-ps76-201ENSMUST00000173876 739 ntBASIC1.9□□□□□ -2.11
Cdx2P43241 Mir3473c-201ENSMUST00000175262 81 ntBASIC1.9□□□□□ -2.11
Cdx2P43241 Gm24638-201ENSMUST00000179807 132 ntBASIC1.9□□□□□ -2.11
Cdx2P43241 Gm27161-201ENSMUST00000183960 562 ntBASIC1.9□□□□□ -2.11
Cdx2P43241 Gm27753-201ENSMUST00000184742 203 ntBASIC1.9□□□□□ -2.11
Cdx2P43241 Gm44300-201ENSMUST00000196792 121 ntBASIC1.9□□□□□ -2.11
Cdx2P43241 Gm6590-201ENSMUST00000203343 687 ntBASIC1.9□□□□□ -2.11
Cdx2P43241 Gm44404-201ENSMUST00000203979 636 ntBASIC1.9□□□□□ -2.11
Cdx2P43241 Gm19233-201ENSMUST00000219772 936 ntBASIC1.9□□□□□ -2.11
Cdx2P43241 Ly96-201ENSMUST00000026881 632 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
Cdx2P43241 Olfr853-201ENSMUST00000058296 918 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
Cdx2P43241 Gm5471-201ENSMUST00000072732 337 ntBASIC1.9□□□□□ -2.11
Cdx2P43241 Mir103-2-201ENSMUST00000083629 86 ntBASIC1.9□□□□□ -2.11
Cdx2P43241 Olfr1448-202ENSMUST00000213177 3979 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
Cdx2P43241 Gm27013-202ENSMUST00000205067 1436 ntBASIC1.9□□□□□ -2.11
Cdx2P43241 A530030E21Rik-201ENSMUST00000199551 1310 ntBASIC1.9□□□□□ -2.11
Cdx2P43241 Lrrc19-201ENSMUST00000053419 2780 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
Cdx2P43241 Arhgap5-202ENSMUST00000217820 2332 ntTSL 5 BASIC1.89□□□□□ -2.11
Cdx2P43241 Adam29-201ENSMUST00000053441 2726 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
Cdx2P43241 Gm23431-201ENSMUST00000104006 107 ntBASIC1.89□□□□□ -2.11
Cdx2P43241 Mir208b-201ENSMUST00000104735 77 ntBASIC1.89□□□□□ -2.11
Cdx2P43241 Gm14677-201ENSMUST00000117866 486 ntBASIC1.89□□□□□ -2.11
Cdx2P43241 Gm13359-201ENSMUST00000119000 695 ntBASIC1.89□□□□□ -2.11
Cdx2P43241 Gm12313-201ENSMUST00000121347 421 ntBASIC1.89□□□□□ -2.11
Cdx2P43241 Gm13424-201ENSMUST00000122301 354 ntBASIC1.89□□□□□ -2.11
Cdx2P43241 Gm16510-201ENSMUST00000153501 249 ntBASIC1.89□□□□□ -2.11
Cdx2P43241 Gm23588-201ENSMUST00000157659 99 ntBASIC1.89□□□□□ -2.11
Cdx2P43241 Gm22727-201ENSMUST00000158090 116 ntBASIC1.89□□□□□ -2.11
Cdx2P43241 Gm26024-201ENSMUST00000158657 322 ntBASIC1.89□□□□□ -2.11
Cdx2P43241 Gm23342-201ENSMUST00000158958 115 ntBASIC1.89□□□□□ -2.11
Cdx2P43241 Gm7592-201ENSMUST00000160674 627 ntBASIC1.89□□□□□ -2.11
Cdx2P43241 Gm17655-201ENSMUST00000167969 255 ntBASIC1.89□□□□□ -2.11
Cdx2P43241 Olfr758-ps1-201ENSMUST00000173901 841 ntBASIC1.89□□□□□ -2.11
Cdx2P43241 Gm27869-201ENSMUST00000184327 122 ntBASIC1.89□□□□□ -2.11
Cdx2P43241 Gm18956-201ENSMUST00000192857 480 ntBASIC1.89□□□□□ -2.11
Cdx2P43241 Rpl23a-ps5-201ENSMUST00000194566 466 ntBASIC1.89□□□□□ -2.11
Cdx2P43241 AC133176.1-201ENSMUST00000226668 219 ntBASIC1.89□□□□□ -2.11
Cdx2P43241 Mucl2-201ENSMUST00000037685 639 ntAPPRIS P2 TSL 1 (best) BASIC1.89□□□□□ -2.11
Cdx2P43241 Gm24044-201ENSMUST00000083107 156 ntBASIC1.89□□□□□ -2.11
Retrieved 100 of 76,532 protein–RNA pairs in 115.4 ms