Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Gm34701-202ENSMUST00000204685 360 ntBASIC3.36□□□□□ -1.87
Traf1P39428 Olfr752-ps1-201ENSMUST00000208736 1141 ntBASIC3.36□□□□□ -1.87
Traf1P39428 Gm18557-201ENSMUST00000218710 433 ntBASIC3.36□□□□□ -1.87
Traf1P39428 Gm33680-201ENSMUST00000219336 576 ntTSL 5 BASIC3.36□□□□□ -1.87
Traf1P39428 AC157494.1-201ENSMUST00000221127 549 ntTSL 5 BASIC3.36□□□□□ -1.87
Traf1P39428 Pdcd10-201ENSMUST00000029424 907 ntTSL 5 BASIC3.36□□□□□ -1.87
Traf1P39428 Gm26206-201ENSMUST00000082908 110 ntBASIC3.36□□□□□ -1.87
Traf1P39428 Olfr309-202ENSMUST00000174158 3293 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
Traf1P39428 Gm5141-202ENSMUST00000201047 3279 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Traf1P39428 Gm16436-201ENSMUST00000121510 1607 ntBASIC3.36□□□□□ -1.87
Traf1P39428 Gm12584-201ENSMUST00000117109 1105 ntBASIC3.35□□□□□ -1.87
Traf1P39428 Gm14868-201ENSMUST00000117840 216 ntBASIC3.35□□□□□ -1.87
Traf1P39428 Olfr1327-ps1-201ENSMUST00000117953 835 ntBASIC3.35□□□□□ -1.87
Traf1P39428 Gm8217-201ENSMUST00000119136 465 ntBASIC3.35□□□□□ -1.87
Traf1P39428 Gm22452-201ENSMUST00000122804 104 ntBASIC3.35□□□□□ -1.87
Traf1P39428 Gm24910-201ENSMUST00000157289 272 ntBASIC3.35□□□□□ -1.87
Traf1P39428 Gm24962-201ENSMUST00000157917 109 ntBASIC3.35□□□□□ -1.87
Traf1P39428 Gm23317-201ENSMUST00000157999 129 ntBASIC3.35□□□□□ -1.87
Traf1P39428 Vmn2r-ps111-201ENSMUST00000161565 241 ntTSL 2 BASIC3.35□□□□□ -1.87
Traf1P39428 Olfr772-201ENSMUST00000169800 1004 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Traf1P39428 Gm9944-201ENSMUST00000177649 309 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Traf1P39428 Gm25360-201ENSMUST00000178786 191 ntBASIC3.35□□□□□ -1.87
Traf1P39428 Gm4076-201ENSMUST00000179230 965 ntBASIC3.35□□□□□ -1.87
Traf1P39428 Obox4-ps39-201ENSMUST00000184306 628 ntBASIC3.35□□□□□ -1.87
Traf1P39428 Gm28628-201ENSMUST00000187006 264 ntBASIC3.35□□□□□ -1.87
Traf1P39428 Gm28163-201ENSMUST00000187099 325 ntBASIC3.35□□□□□ -1.87
Traf1P39428 Gm28629-201ENSMUST00000187309 263 ntBASIC3.35□□□□□ -1.87
Traf1P39428 Gm28986-201ENSMUST00000189682 678 ntTSL 5 BASIC3.35□□□□□ -1.87
Traf1P39428 Gm37059-201ENSMUST00000191723 678 ntTSL 5 BASIC3.35□□□□□ -1.87
Traf1P39428 Igkv13-61-1-201ENSMUST00000198255 296 ntBASIC3.35□□□□□ -1.87
Traf1P39428 Gm31230-201ENSMUST00000199725 785 ntBASIC3.35□□□□□ -1.87
Traf1P39428 Gm43232-201ENSMUST00000201346 364 ntBASIC3.35□□□□□ -1.87
Traf1P39428 Gm45687-201ENSMUST00000209454 155 ntBASIC3.35□□□□□ -1.87
Traf1P39428 AC139754.1-201ENSMUST00000219418 950 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Traf1P39428 Olfr235-201ENSMUST00000073507 1079 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Traf1P39428 Gm24817-201ENSMUST00000093672 105 ntBASIC3.35□□□□□ -1.87
Traf1P39428 Olfr1477-202ENSMUST00000217001 4000 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
Traf1P39428 Olfr218-203ENSMUST00000216603 3623 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Traf1P39428 Vmn1r29-203ENSMUST00000227761 4671 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Traf1P39428 Vmn1r29-205ENSMUST00000228909 4658 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Traf1P39428 Gm44049-201ENSMUST00000204905 2984 ntBASIC3.34□□□□□ -1.87
Traf1P39428 Gm43326-201ENSMUST00000198459 1638 ntBASIC3.34□□□□□ -1.87
Traf1P39428 Gm25563-201ENSMUST00000104603 74 ntBASIC3.34□□□□□ -1.87
Traf1P39428 Gm15760-201ENSMUST00000119553 283 ntBASIC3.34□□□□□ -1.87
Traf1P39428 Olfr381-202ENSMUST00000119863 1065 ntAPPRIS P1 TSL 3 BASIC3.34□□□□□ -1.87
Traf1P39428 Gm11785-201ENSMUST00000120165 601 ntBASIC3.34□□□□□ -1.87
Traf1P39428 Gm25102-201ENSMUST00000122479 112 ntBASIC3.34□□□□□ -1.87
Traf1P39428 Gm15671-201ENSMUST00000124160 576 ntTSL 5 BASIC3.34□□□□□ -1.87
Traf1P39428 Gm20513-201ENSMUST00000174074 537 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Traf1P39428 Gm1553-201ENSMUST00000177934 658 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
Traf1P39428 Gm26928-201ENSMUST00000182674 572 ntBASIC3.34□□□□□ -1.87
Traf1P39428 Mir6386-201ENSMUST00000183558 104 ntBASIC3.34□□□□□ -1.87
Traf1P39428 Gm27379-201ENSMUST00000183730 123 ntBASIC3.34□□□□□ -1.87
Traf1P39428 1700040F17Rik-201ENSMUST00000187158 817 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Traf1P39428 Gm43104-201ENSMUST00000197234 311 ntBASIC3.34□□□□□ -1.87
Traf1P39428 Gm43393-201ENSMUST00000200147 194 ntBASIC3.34□□□□□ -1.87
Traf1P39428 Gm32222-201ENSMUST00000203296 298 ntBASIC3.34□□□□□ -1.87
Traf1P39428 Olfr795-ps1-201ENSMUST00000205245 763 ntBASIC3.34□□□□□ -1.87
Traf1P39428 Gm45590-201ENSMUST00000209715 262 ntBASIC3.34□□□□□ -1.87
Traf1P39428 Gm39154-201ENSMUST00000210257 560 ntTSL 5 BASIC3.34□□□□□ -1.87
Traf1P39428 Olfr861-ps1-201ENSMUST00000212783 928 ntBASIC3.34□□□□□ -1.87
Traf1P39428 AC168266.1-201ENSMUST00000216024 226 ntBASIC3.34□□□□□ -1.87
Traf1P39428 AC167721.1-201ENSMUST00000217088 279 ntBASIC3.34□□□□□ -1.87
Traf1P39428 Olfr967-201ENSMUST00000069561 933 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Traf1P39428 Olfr395-201ENSMUST00000072991 939 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Traf1P39428 Gm23448-201ENSMUST00000083151 104 ntBASIC3.34□□□□□ -1.87
Traf1P39428 Rps15a-ps2-201ENSMUST00000087473 393 ntBASIC3.34□□□□□ -1.87
Traf1P39428 Olfr619-201ENSMUST00000098196 1124 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Traf1P39428 Atp11c-205ENSMUST00000154051 6039 ntTSL 5 BASIC3.34□□□□□ -1.87
Traf1P39428 Olfr1206-202ENSMUST00000216950 3303 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
Traf1P39428 C87977-201ENSMUST00000105753 2446 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
Traf1P39428 Olfr218-202ENSMUST00000215844 3410 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Traf1P39428 Igkv13-87-201ENSMUST00000114214 286 ntBASIC3.33□□□□□ -1.88
Traf1P39428 Olfr1073-ps1-201ENSMUST00000117635 381 ntBASIC3.33□□□□□ -1.88
Traf1P39428 Sult2a-ps4-201ENSMUST00000121421 386 ntBASIC3.33□□□□□ -1.88
Traf1P39428 Gm22236-201ENSMUST00000157093 106 ntBASIC3.33□□□□□ -1.88
Traf1P39428 Gm26099-201ENSMUST00000157248 109 ntBASIC3.33□□□□□ -1.88
Traf1P39428 Gm22839-201ENSMUST00000158436 304 ntBASIC3.33□□□□□ -1.88
Traf1P39428 Tcrg-C3-201ENSMUST00000164407 519 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
Traf1P39428 Ccdc152-201ENSMUST00000165386 798 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Traf1P39428 Gm18396-201ENSMUST00000177095 361 ntBASIC3.33□□□□□ -1.88
Traf1P39428 Gm25156-201ENSMUST00000179809 79 ntBASIC3.33□□□□□ -1.88
Traf1P39428 Gm5268-201ENSMUST00000189212 940 ntBASIC3.33□□□□□ -1.88
Traf1P39428 Gm19066-201ENSMUST00000193232 1078 ntBASIC3.33□□□□□ -1.88
Traf1P39428 Igkv5-40-1-201ENSMUST00000196457 359 ntBASIC3.33□□□□□ -1.88
Traf1P39428 Igkv13-73-1-201ENSMUST00000196767 200 ntBASIC3.33□□□□□ -1.88
Traf1P39428 Gm19202-201ENSMUST00000198096 808 ntBASIC3.33□□□□□ -1.88
Traf1P39428 Gm40292-201ENSMUST00000202383 553 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
Traf1P39428 Gm44157-201ENSMUST00000204720 410 ntBASIC3.33□□□□□ -1.88
Traf1P39428 Gm44135-201ENSMUST00000205221 368 ntBASIC3.33□□□□□ -1.88
Traf1P39428 Gm45658-201ENSMUST00000209197 580 ntBASIC3.33□□□□□ -1.88
Traf1P39428 Gm39231-201ENSMUST00000209813 501 ntTSL 5 BASIC3.33□□□□□ -1.88
Traf1P39428 Olfr929-ps1-201ENSMUST00000216338 585 ntBASIC3.33□□□□□ -1.88
Traf1P39428 AC101984.1-201ENSMUST00000219639 402 ntBASIC3.33□□□□□ -1.88
Traf1P39428 4930455B14Rik-203ENSMUST00000223613 640 ntBASIC3.33□□□□□ -1.88
Traf1P39428 AC241593.1-201ENSMUST00000224768 397 ntBASIC3.33□□□□□ -1.88
Traf1P39428 Olfr1454-201ENSMUST00000073732 924 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Traf1P39428 Zfp953-201ENSMUST00000081582 4677 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Traf1P39428 Gm38083-201ENSMUST00000194758 3498 ntBASIC3.33□□□□□ -1.88
Traf1P39428 Gm37928-201ENSMUST00000193265 4131 ntBASIC3.33□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 112.6 ms