Protein–RNA interactions for Protein: P13297

Msx1, Homeobox protein MSX-1, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx1P13297 Gm5777-201ENSMUST00000177265 448 ntBASIC4.79□□□□□ -1.64
Msx1P13297 Gm27688-201ENSMUST00000183634 91 ntBASIC4.79□□□□□ -1.64
Msx1P13297 Ighv3-4-201ENSMUST00000193408 353 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Msx1P13297 Gm44337-201ENSMUST00000196553 114 ntBASIC4.79□□□□□ -1.64
Msx1P13297 Gm45422-201ENSMUST00000211476 246 ntBASIC4.79□□□□□ -1.64
Msx1P13297 AC171203.1-201ENSMUST00000215363 456 ntTSL 5 BASIC4.79□□□□□ -1.64
Msx1P13297 Gm8274-201ENSMUST00000219820 463 ntBASIC4.79□□□□□ -1.64
Msx1P13297 AL731706.1-202ENSMUST00000226652 180 ntAPPRIS P5 BASIC4.79□□□□□ -1.64
Msx1P13297 Gm22220-201ENSMUST00000082671 149 ntBASIC4.79□□□□□ -1.64
Msx1P13297 Gm24356-201ENSMUST00000082859 106 ntBASIC4.79□□□□□ -1.64
Msx1P13297 Olfr685-203ENSMUST00000214712 3326 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
Msx1P13297 Gramd1c-201ENSMUST00000036174 3501 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Msx1P13297 Oog2-201ENSMUST00000080405 1917 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Msx1P13297 Gm38407-202ENSMUST00000219221 2391 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Msx1P13297 Olfr1263-204ENSMUST00000217065 4186 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Msx1P13297 D030025E07Rik-203ENSMUST00000197413 2346 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Msx1P13297 Gm6645-201ENSMUST00000118505 2726 ntBASIC4.79□□□□□ -1.64
Msx1P13297 Nfat5-202ENSMUST00000077440 12773 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
Msx1P13297 Spag17-204ENSMUST00000164539 7862 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Msx1P13297 March1-203ENSMUST00000098708 4000 ntAPPRIS P3 TSL 5 BASIC4.78□□□□□ -1.64
Msx1P13297 Vmn1r204-202ENSMUST00000228195 2936 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Msx1P13297 Nlrp1b-202ENSMUST00000108514 3541 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
Msx1P13297 Ceacam3-201ENSMUST00000108491 3261 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Msx1P13297 Olfr665-203ENSMUST00000216257 2298 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Msx1P13297 Trav15-1-dv6-1-201ENSMUST00000103653 349 ntAPPRIS ALT2 BASIC4.78□□□□□ -1.64
Msx1P13297 Gm24282-201ENSMUST00000104232 66 ntBASIC4.78□□□□□ -1.64
Msx1P13297 Gm11020-201ENSMUST00000109447 186 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Msx1P13297 Mdga2-203ENSMUST00000113942 423 ntBASIC4.78□□□□□ -1.64
Msx1P13297 Gm23993-201ENSMUST00000157478 144 ntBASIC4.78□□□□□ -1.64
Msx1P13297 Gm23115-201ENSMUST00000158480 108 ntBASIC4.78□□□□□ -1.64
Msx1P13297 Scgb2b16-ps-201ENSMUST00000188720 333 ntBASIC4.78□□□□□ -1.64
Msx1P13297 Gm28848-201ENSMUST00000189984 168 ntBASIC4.78□□□□□ -1.64
Msx1P13297 Gm37361-201ENSMUST00000194345 132 ntBASIC4.78□□□□□ -1.64
Msx1P13297 4930598N05Rik-207ENSMUST00000208997 83 ntTSL 5 BASIC4.78□□□□□ -1.64
Msx1P13297 Gm9616-201ENSMUST00000221154 781 ntBASIC4.78□□□□□ -1.64
Msx1P13297 Gm18617-201ENSMUST00000222311 259 ntBASIC4.78□□□□□ -1.64
Msx1P13297 Snora2b-201ENSMUST00000084005 137 ntBASIC4.78□□□□□ -1.64
Msx1P13297 Olfr1101-202ENSMUST00000214411 3235 ntAPPRIS P1 TSL 3 BASIC4.78□□□□□ -1.64
Msx1P13297 Cnot6l-202ENSMUST00000113005 3170 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
Msx1P13297 Pnpla8-201ENSMUST00000043082 13507 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
Msx1P13297 Vmn2r49-201ENSMUST00000108550 2559 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Msx1P13297 Slc22a27-201ENSMUST00000075619 2152 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Msx1P13297 AC160130.1-201ENSMUST00000220734 2735 ntBASIC4.78□□□□□ -1.64
Msx1P13297 Vmn1r39-206ENSMUST00000228651 2144 ntAPPRIS ALT2 BASIC4.78□□□□□ -1.64
Msx1P13297 Gm44230-201ENSMUST00000203032 3550 ntBASIC4.78□□□□□ -1.64
Msx1P13297 Olfr1229-202ENSMUST00000213883 3594 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Msx1P13297 Olfr911-ps1-202ENSMUST00000216496 3576 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Msx1P13297 Rapgef4-201ENSMUST00000028525 4109 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Msx1P13297 Gm43085-201ENSMUST00000202859 3132 ntBASIC4.77□□□□□ -1.65
Msx1P13297 Cdh12-201ENSMUST00000075132 5636 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Msx1P13297 Nexn-212ENSMUST00000199470 2392 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
Msx1P13297 Olfr470-203ENSMUST00000220193 3080 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Msx1P13297 Gm43508-201ENSMUST00000197251 3783 ntBASIC4.77□□□□□ -1.65
Msx1P13297 Olfr984-202ENSMUST00000213858 5186 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Msx1P13297 Scml2-203ENSMUST00000077375 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
Msx1P13297 Vmn1r171-209ENSMUST00000228228 2863 ntAPPRIS ALT2 BASIC4.77□□□□□ -1.65
Msx1P13297 Zfp62-201ENSMUST00000061757 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Msx1P13297 Cenpj-201ENSMUST00000065302 4363 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Msx1P13297 Igkv1-133-201ENSMUST00000103304 374 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
Msx1P13297 Igkv14-100-201ENSMUST00000103325 350 ntAPPRIS ALT2 BASIC4.77□□□□□ -1.65
Msx1P13297 Traj43-201ENSMUST00000103699 57 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
Msx1P13297 Gm14086-201ENSMUST00000117152 173 ntBASIC4.77□□□□□ -1.65
Msx1P13297 Gm13172-201ENSMUST00000118685 256 ntBASIC4.77□□□□□ -1.65
Msx1P13297 Gm13432-201ENSMUST00000118861 241 ntBASIC4.77□□□□□ -1.65
Msx1P13297 Gm22453-201ENSMUST00000122801 318 ntBASIC4.77□□□□□ -1.65
Msx1P13297 Gm22320-201ENSMUST00000157149 312 ntBASIC4.77□□□□□ -1.65
Msx1P13297 Gm24188-201ENSMUST00000157980 108 ntBASIC4.77□□□□□ -1.65
Msx1P13297 Gt(ROSA)26Sor-204ENSMUST00000167415 551 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Msx1P13297 Mir5098-201ENSMUST00000175320 82 ntBASIC4.77□□□□□ -1.65
Msx1P13297 Gm26200-201ENSMUST00000180273 79 ntBASIC4.77□□□□□ -1.65
Msx1P13297 Gm26683-201ENSMUST00000181737 470 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Msx1P13297 Mir21b-201ENSMUST00000184317 108 ntBASIC4.77□□□□□ -1.65
Msx1P13297 Gm23925-202ENSMUST00000188429 132 ntBASIC4.77□□□□□ -1.65
Msx1P13297 Gm34583-202ENSMUST00000202537 451 ntTSL 2 BASIC4.77□□□□□ -1.65
Msx1P13297 Gm44182-201ENSMUST00000204052 115 ntBASIC4.77□□□□□ -1.65
Msx1P13297 Gm44030-201ENSMUST00000204865 432 ntBASIC4.77□□□□□ -1.65
Msx1P13297 Gm44515-201ENSMUST00000209045 379 ntTSL 5 BASIC4.77□□□□□ -1.65
Msx1P13297 Jakmip1-216ENSMUST00000212997 138 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Msx1P13297 AC153979.1-201ENSMUST00000219684 242 ntTSL 5 BASIC4.77□□□□□ -1.65
Msx1P13297 Gm25260-201ENSMUST00000083053 134 ntBASIC4.77□□□□□ -1.65
Msx1P13297 Zfp369-202ENSMUST00000126879 2909 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Msx1P13297 Gm44532-201ENSMUST00000207723 2598 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Msx1P13297 Foxr2-201ENSMUST00000096265 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Msx1P13297 Zfp143-201ENSMUST00000084727 3003 ntAPPRIS ALT1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Msx1P13297 Gm12010-201ENSMUST00000122400 2017 ntBASIC4.77□□□□□ -1.65
Msx1P13297 Olfr1406-203ENSMUST00000215878 3149 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Msx1P13297 Vmn2r115-201ENSMUST00000168175 2574 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Msx1P13297 Epha7-201ENSMUST00000029964 6746 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
Msx1P13297 Gm5570-202ENSMUST00000101355 2527 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Msx1P13297 Gm37558-201ENSMUST00000193684 2983 ntBASIC4.76□□□□□ -1.65
Msx1P13297 Olfr1271-202ENSMUST00000216383 6613 ntAPPRIS P1 TSL 3 BASIC4.76□□□□□ -1.65
Msx1P13297 Gm12261-201ENSMUST00000117499 645 ntBASIC4.76□□□□□ -1.65
Msx1P13297 Mcmdc2-204ENSMUST00000140948 3249 ntTSL 5 BASIC4.76□□□□□ -1.65
Msx1P13297 Gm25907-201ENSMUST00000158486 125 ntBASIC4.76□□□□□ -1.65
Msx1P13297 Gm22476-201ENSMUST00000158902 100 ntBASIC4.76□□□□□ -1.65
Msx1P13297 Gm22367-201ENSMUST00000178930 132 ntBASIC4.76□□□□□ -1.65
Msx1P13297 Gm26983-201ENSMUST00000182051 388 ntBASIC4.76□□□□□ -1.65
Msx1P13297 Mir6933-201ENSMUST00000184982 81 ntBASIC4.76□□□□□ -1.65
Msx1P13297 Scgb2b28-ps-201ENSMUST00000188974 337 ntBASIC4.76□□□□□ -1.65
Msx1P13297 Gm38011-201ENSMUST00000193312 279 ntBASIC4.76□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 85.4 ms