Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 Gm13737-201ENSMUST00000119793 232 ntBASIC4.7□□□□□ -1.66
RaraP11416 Gm11785-201ENSMUST00000120165 601 ntBASIC4.7□□□□□ -1.66
RaraP11416 Rpl23a-ps13-201ENSMUST00000120350 441 ntBASIC4.7□□□□□ -1.66
RaraP11416 Gm15037-201ENSMUST00000120358 259 ntBASIC4.7□□□□□ -1.66
RaraP11416 Gm14037-201ENSMUST00000120576 313 ntBASIC4.7□□□□□ -1.66
RaraP11416 Gm26310-201ENSMUST00000157766 117 ntBASIC4.7□□□□□ -1.66
RaraP11416 Gm22098-201ENSMUST00000157930 85 ntBASIC4.7□□□□□ -1.66
RaraP11416 Ear-ps8-201ENSMUST00000161935 354 ntBASIC4.7□□□□□ -1.66
RaraP11416 Gm16326-201ENSMUST00000162843 414 ntBASIC4.7□□□□□ -1.66
RaraP11416 Gm17133-201ENSMUST00000170636 289 ntTSL 3 BASIC4.7□□□□□ -1.66
RaraP11416 Gm21893-201ENSMUST00000179119 397 ntBASIC4.7□□□□□ -1.66
RaraP11416 2310001H17Rik-201ENSMUST00000180379 521 ntTSL 2 BASIC4.7□□□□□ -1.66
RaraP11416 Gm29320-201ENSMUST00000185235 615 ntBASIC4.7□□□□□ -1.66
RaraP11416 Gm28339-201ENSMUST00000185845 696 ntBASIC4.7□□□□□ -1.66
RaraP11416 Gm28471-201ENSMUST00000185994 615 ntBASIC4.7□□□□□ -1.66
RaraP11416 Gm29179-202ENSMUST00000186138 615 ntBASIC4.7□□□□□ -1.66
RaraP11416 Gm28598-201ENSMUST00000186490 615 ntBASIC4.7□□□□□ -1.66
RaraP11416 Gm28057-201ENSMUST00000186603 615 ntBASIC4.7□□□□□ -1.66
RaraP11416 Gm29448-201ENSMUST00000186675 615 ntBASIC4.7□□□□□ -1.66
RaraP11416 Gm29314-201ENSMUST00000186800 615 ntBASIC4.7□□□□□ -1.66
RaraP11416 Gm28253-202ENSMUST00000187971 615 ntBASIC4.7□□□□□ -1.66
RaraP11416 Gm28896-201ENSMUST00000188609 696 ntBASIC4.7□□□□□ -1.66
RaraP11416 Gm29268-201ENSMUST00000188669 615 ntBASIC4.7□□□□□ -1.66
RaraP11416 Gm29169-201ENSMUST00000189835 615 ntBASIC4.7□□□□□ -1.66
RaraP11416 Gm37172-201ENSMUST00000191926 615 ntBASIC4.7□□□□□ -1.66
RaraP11416 Gm38107-201ENSMUST00000194873 696 ntBASIC4.7□□□□□ -1.66
RaraP11416 Gm4045-201ENSMUST00000204076 310 ntBASIC4.7□□□□□ -1.66
RaraP11416 AC153646.2-201ENSMUST00000220516 109 ntBASIC4.7□□□□□ -1.66
RaraP11416 Rpl21-ps4-201ENSMUST00000080237 438 ntBASIC4.7□□□□□ -1.66
RaraP11416 Abca16-201ENSMUST00000056042 5085 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
RaraP11416 Olfr844-202ENSMUST00000220268 1686 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
RaraP11416 AC160931.3-201ENSMUST00000222111 2267 ntBASIC4.7□□□□□ -1.66
RaraP11416 Vmn1r178-204ENSMUST00000226640 2282 ntBASIC4.7□□□□□ -1.66
RaraP11416 Hnrnpr-207ENSMUST00000148843 21452 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
RaraP11416 Trim30b-205ENSMUST00000171830 2771 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
RaraP11416 Gm43197-201ENSMUST00000201493 2583 ntBASIC4.69□□□□□ -1.66
RaraP11416 Olfr1316-202ENSMUST00000213696 4184 ntAPPRIS ALT1 TSL 5 BASIC4.69□□□□□ -1.66
RaraP11416 Gm45137-201ENSMUST00000208652 4415 ntBASIC4.69□□□□□ -1.66
RaraP11416 Gm3636-202ENSMUST00000163850 1746 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
RaraP11416 Lipo5-201ENSMUST00000156818 2003 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
RaraP11416 Gm23879-201ENSMUST00000116874 126 ntBASIC4.69□□□□□ -1.66
RaraP11416 Gm11572-201ENSMUST00000119164 120 ntBASIC4.69□□□□□ -1.66
RaraP11416 Etaa1os-201ENSMUST00000140161 550 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
RaraP11416 Gm25278-201ENSMUST00000157267 120 ntBASIC4.69□□□□□ -1.66
RaraP11416 Gm22726-201ENSMUST00000158089 179 ntBASIC4.69□□□□□ -1.66
RaraP11416 Gm25224-201ENSMUST00000158195 68 ntBASIC4.69□□□□□ -1.66
RaraP11416 Gm27896-201ENSMUST00000175162 317 ntBASIC4.69□□□□□ -1.66
RaraP11416 Gm25121-201ENSMUST00000179846 79 ntBASIC4.69□□□□□ -1.66
RaraP11416 Gm26979-201ENSMUST00000182971 217 ntTSL 3 BASIC4.69□□□□□ -1.66
RaraP11416 Gm37050-201ENSMUST00000193464 466 ntBASIC4.69□□□□□ -1.66
RaraP11416 Igkv13-76-201ENSMUST00000197621 347 ntBASIC4.69□□□□□ -1.66
RaraP11416 Gm43001-202ENSMUST00000199076 192 ntTSL 3 BASIC4.69□□□□□ -1.66
RaraP11416 Gm44072-201ENSMUST00000203666 383 ntTSL 3 BASIC4.69□□□□□ -1.66
RaraP11416 Gm45273-201ENSMUST00000211559 281 ntBASIC4.69□□□□□ -1.66
RaraP11416 Gm35857-201ENSMUST00000212739 178 ntBASIC4.69□□□□□ -1.66
RaraP11416 AC123860.1-201ENSMUST00000228033 481 ntBASIC4.69□□□□□ -1.66
RaraP11416 Gm9795-201ENSMUST00000062156 693 ntBASIC4.69□□□□□ -1.66
RaraP11416 Mup1-201ENSMUST00000084548 776 ntAPPRIS ALT2 TSL 3 BASIC4.69□□□□□ -1.66
RaraP11416 Smim4-203ENSMUST00000090205 426 ntTSL 2 BASIC4.69□□□□□ -1.66
RaraP11416 Vmn1r195-202ENSMUST00000228711 3056 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
RaraP11416 Pak3-204ENSMUST00000112865 8484 ntAPPRIS P3 TSL 5 BASIC4.69□□□□□ -1.66
RaraP11416 CT025577.1-201ENSMUST00000220862 2846 ntBASIC4.69□□□□□ -1.66
RaraP11416 Gm8935-202ENSMUST00000105727 1959 ntBASIC4.69□□□□□ -1.66
RaraP11416 Tdo2-201ENSMUST00000029645 3431 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
RaraP11416 Gm16892-201ENSMUST00000180999 1726 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
RaraP11416 Phf11c-201ENSMUST00000166912 3459 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
RaraP11416 Gpm6a-201ENSMUST00000033915 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
RaraP11416 Olfr1507-203ENSMUST00000206062 2803 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
RaraP11416 Steap2-204ENSMUST00000115426 10408 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
RaraP11416 Gm19428-201ENSMUST00000220512 1995 ntBASIC4.68□□□□□ -1.66
RaraP11416 Gm22899-201ENSMUST00000104540 131 ntBASIC4.68□□□□□ -1.66
RaraP11416 Gm13873-201ENSMUST00000119208 427 ntBASIC4.68□□□□□ -1.66
RaraP11416 Gm11366-201ENSMUST00000119279 429 ntBASIC4.68□□□□□ -1.66
RaraP11416 Gm15162-201ENSMUST00000119325 283 ntBASIC4.68□□□□□ -1.66
RaraP11416 Gm25783-201ENSMUST00000122525 190 ntBASIC4.68□□□□□ -1.66
RaraP11416 Gm13793-201ENSMUST00000124214 438 ntTSL 2 BASIC4.68□□□□□ -1.66
RaraP11416 Gm26287-201ENSMUST00000158887 81 ntBASIC4.68□□□□□ -1.66
RaraP11416 Gm24664-201ENSMUST00000158939 100 ntBASIC4.68□□□□□ -1.66
RaraP11416 Rpl26-ps4-201ENSMUST00000170279 438 ntBASIC4.68□□□□□ -1.66
RaraP11416 Mir6335-201ENSMUST00000184081 98 ntBASIC4.68□□□□□ -1.66
RaraP11416 1700010I02Rik-201ENSMUST00000187729 438 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
RaraP11416 Gm43651-201ENSMUST00000199796 439 ntBASIC4.68□□□□□ -1.66
RaraP11416 Gm45209-201ENSMUST00000207122 353 ntBASIC4.68□□□□□ -1.66
RaraP11416 Gm44859-201ENSMUST00000207831 94 ntBASIC4.68□□□□□ -1.66
RaraP11416 AC091783.5-201ENSMUST00000224928 671 ntBASIC4.68□□□□□ -1.66
RaraP11416 Gm22685-201ENSMUST00000082848 106 ntBASIC4.68□□□□□ -1.66
RaraP11416 Fam169a-202ENSMUST00000169863 6013 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
RaraP11416 Olfr1130-201ENSMUST00000213103 2643 ntAPPRIS P1 TSL 3 BASIC4.68□□□□□ -1.66
RaraP11416 Angptl3-201ENSMUST00000030280 1482 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
RaraP11416 Cdh10-201ENSMUST00000040562 3407 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
RaraP11416 Gm3584-201ENSMUST00000173822 2565 ntBASIC4.67□□□□□ -1.66
RaraP11416 Slco1a5-201ENSMUST00000081380 2572 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
RaraP11416 Gm45792-201ENSMUST00000207795 4268 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
RaraP11416 Rnf128-202ENSMUST00000113027 2641 ntTSL 5 BASIC4.67□□□□□ -1.66
RaraP11416 Gm21035-201ENSMUST00000207867 2608 ntBASIC4.67□□□□□ -1.66
RaraP11416 Neat1-201ENSMUST00000173672 20771 ntBASIC4.67□□□□□ -1.66
RaraP11416 Vmn1r167-202ENSMUST00000227713 2677 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
RaraP11416 Gm4631-202ENSMUST00000121393 4402 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
RaraP11416 Vmn2r86-201ENSMUST00000170257 3039 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
RaraP11416 Gm24121-201ENSMUST00000102029 106 ntBASIC4.67□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 85.5 ms