Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Gm1553-201ENSMUST00000177934 658 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
Chmp6P0C0A3 Anks1b-207ENSMUST00000182045 544 ntTSL 3 BASIC2.61□□□□□ -1.99
Chmp6P0C0A3 Gm27220-201ENSMUST00000183453 262 ntBASIC2.61□□□□□ -1.99
Chmp6P0C0A3 Gm29335-201ENSMUST00000188361 459 ntBASIC2.61□□□□□ -1.99
Chmp6P0C0A3 Gm43722-201ENSMUST00000196054 124 ntBASIC2.61□□□□□ -1.99
Chmp6P0C0A3 Gm19709-201ENSMUST00000215403 482 ntBASIC2.61□□□□□ -1.99
Chmp6P0C0A3 Prl2c5-201ENSMUST00000021778 844 ntAPPRIS P3 TSL 1 (best) BASIC2.61□□□□□ -1.99
Chmp6P0C0A3 1700030L22Rik-202ENSMUST00000222223 704 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
Chmp6P0C0A3 Gm5374-201ENSMUST00000222868 657 ntBASIC2.61□□□□□ -1.99
Chmp6P0C0A3 AC117202.3-201ENSMUST00000228532 310 ntBASIC2.61□□□□□ -1.99
Chmp6P0C0A3 Gm21994-201ENSMUST00000063463 990 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
Chmp6P0C0A3 Gm10234-201ENSMUST00000089304 60 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
Chmp6P0C0A3 Gm37296-201ENSMUST00000192728 2922 ntBASIC2.61□□□□□ -1.99
Chmp6P0C0A3 Gm22752-201ENSMUST00000102083 109 ntBASIC2.6□□□□□ -1.99
Chmp6P0C0A3 Gm12598-201ENSMUST00000117333 830 ntBASIC2.6□□□□□ -1.99
Chmp6P0C0A3 4930515L19Rik-201ENSMUST00000152352 769 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
Chmp6P0C0A3 Gm3852-201ENSMUST00000182781 264 ntBASIC2.6□□□□□ -1.99
Chmp6P0C0A3 Mir6917-201ENSMUST00000184111 61 ntBASIC2.6□□□□□ -1.99
Chmp6P0C0A3 Gm28900-201ENSMUST00000185232 156 ntBASIC2.6□□□□□ -1.99
Chmp6P0C0A3 Gm3489-201ENSMUST00000190083 528 ntBASIC2.6□□□□□ -1.99
Chmp6P0C0A3 Gm42565-201ENSMUST00000197839 572 ntTSL 5 BASIC2.6□□□□□ -1.99
Chmp6P0C0A3 Trav14-1-201ENSMUST00000198297 399 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
Chmp6P0C0A3 Gm43301-201ENSMUST00000198918 778 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
Chmp6P0C0A3 Gm19649-201ENSMUST00000201126 822 ntBASIC2.6□□□□□ -1.99
Chmp6P0C0A3 Gm36816-202ENSMUST00000205197 504 ntTSL 5 BASIC2.6□□□□□ -1.99
Chmp6P0C0A3 Gm45173-201ENSMUST00000206819 305 ntBASIC2.6□□□□□ -1.99
Chmp6P0C0A3 Gm44754-201ENSMUST00000208155 400 ntBASIC2.6□□□□□ -1.99
Chmp6P0C0A3 Gm44954-201ENSMUST00000208513 227 ntBASIC2.6□□□□□ -1.99
Chmp6P0C0A3 Gm45288-201ENSMUST00000210236 151 ntBASIC2.6□□□□□ -1.99
Chmp6P0C0A3 AC165146.1-201ENSMUST00000223777 900 ntBASIC2.6□□□□□ -1.99
Chmp6P0C0A3 Olfr769-201ENSMUST00000050915 1084 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
Chmp6P0C0A3 Gm25199-201ENSMUST00000083095 104 ntBASIC2.6□□□□□ -1.99
Chmp6P0C0A3 Gm23096-201ENSMUST00000083447 107 ntBASIC2.6□□□□□ -1.99
Chmp6P0C0A3 Sult3a1-201ENSMUST00000092597 1047 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
Chmp6P0C0A3 Gm44133-202ENSMUST00000204450 2586 ntBASIC2.6□□□□□ -1.99
Chmp6P0C0A3 Olfr218-202ENSMUST00000215844 3410 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
Chmp6P0C0A3 Olfr1206-202ENSMUST00000216950 3303 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
Chmp6P0C0A3 Esp34-201ENSMUST00000173055 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -1.99
Chmp6P0C0A3 Esp34-202ENSMUST00000178654 1413 ntAPPRIS P2 TSL 1 (best) BASIC2.59□□□□□ -1.99
Chmp6P0C0A3 Gm43896-201ENSMUST00000203440 2032 ntBASIC2.59□□□□□ -1.99
Chmp6P0C0A3 Ighv1-54-201ENSMUST00000103525 377 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
Chmp6P0C0A3 Gm24280-201ENSMUST00000104237 134 ntBASIC2.59□□□□□ -1.99
Chmp6P0C0A3 Vmn1r121-201ENSMUST00000105197 945 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
Chmp6P0C0A3 Dppa1-202ENSMUST00000109227 551 ntAPPRIS P1 TSL 2 BASIC2.59□□□□□ -1.99
Chmp6P0C0A3 Gm13756-201ENSMUST00000117618 222 ntBASIC2.59□□□□□ -1.99
Chmp6P0C0A3 Olfr1144-ps1-201ENSMUST00000118227 328 ntBASIC2.59□□□□□ -1.99
Chmp6P0C0A3 Gm12935-201ENSMUST00000119352 246 ntBASIC2.59□□□□□ -1.99
Chmp6P0C0A3 Gm12607-201ENSMUST00000120724 493 ntBASIC2.59□□□□□ -1.99
Chmp6P0C0A3 Gm14694-201ENSMUST00000121856 282 ntBASIC2.59□□□□□ -1.99
Chmp6P0C0A3 Gm14651-201ENSMUST00000147192 442 ntBASIC2.59□□□□□ -1.99
Chmp6P0C0A3 Gm14167-201ENSMUST00000148705 433 ntTSL 3 BASIC2.59□□□□□ -1.99
Chmp6P0C0A3 Gm25637-201ENSMUST00000157529 107 ntBASIC2.59□□□□□ -1.99
Chmp6P0C0A3 Gm23032-201ENSMUST00000157995 107 ntBASIC2.59□□□□□ -1.99
Chmp6P0C0A3 Gm24212-201ENSMUST00000158258 132 ntBASIC2.59□□□□□ -1.99
Chmp6P0C0A3 Gm23704-201ENSMUST00000158844 340 ntBASIC2.59□□□□□ -1.99
Chmp6P0C0A3 Gm15562-201ENSMUST00000161397 426 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
Chmp6P0C0A3 Gm8392-201ENSMUST00000185647 835 ntBASIC2.59□□□□□ -1.99
Chmp6P0C0A3 Ly96-202ENSMUST00000190366 429 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
Chmp6P0C0A3 Gm6135-201ENSMUST00000198726 372 ntTSL 2 BASIC2.59□□□□□ -1.99
Chmp6P0C0A3 AC155839.1-201ENSMUST00000200105 147 ntBASIC2.59□□□□□ -1.99
Chmp6P0C0A3 2900064F13Rik-201ENSMUST00000202166 1008 ntBASIC2.59□□□□□ -1.99
Chmp6P0C0A3 Gm35386-201ENSMUST00000204603 629 ntTSL 3 BASIC2.59□□□□□ -1.99
Chmp6P0C0A3 Gm44555-201ENSMUST00000209008 148 ntBASIC2.59□□□□□ -1.99
Chmp6P0C0A3 Olfr528-ps1-201ENSMUST00000211655 728 ntBASIC2.59□□□□□ -1.99
Chmp6P0C0A3 AC126673.2-201ENSMUST00000221052 686 ntBASIC2.59□□□□□ -1.99
Chmp6P0C0A3 AC168062.2-201ENSMUST00000228907 422 ntBASIC2.59□□□□□ -1.99
Chmp6P0C0A3 Olfr916-201ENSMUST00000081196 933 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
Chmp6P0C0A3 Mir137-201ENSMUST00000083635 73 ntBASIC2.59□□□□□ -1.99
Chmp6P0C0A3 Gm14325-203ENSMUST00000188914 1494 ntTSL 5 BASIC2.58□□□□□ -2
Chmp6P0C0A3 Cyp3a44-201ENSMUST00000067479 1962 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Chmp6P0C0A3 Gm29515-201ENSMUST00000188273 2077 ntTSL 1 (best) BASIC2.58□□□□□ -2
Chmp6P0C0A3 Olfr1158-201ENSMUST00000102622 942 ntAPPRIS P1 BASIC2.58□□□□□ -2
Chmp6P0C0A3 Gm11219-201ENSMUST00000118565 358 ntBASIC2.58□□□□□ -2
Chmp6P0C0A3 Gm14602-201ENSMUST00000118625 340 ntBASIC2.58□□□□□ -2
Chmp6P0C0A3 Gm12016-201ENSMUST00000119079 681 ntBASIC2.58□□□□□ -2
Chmp6P0C0A3 Gm14945-201ENSMUST00000119556 1118 ntBASIC2.58□□□□□ -2
Chmp6P0C0A3 Gm14843-201ENSMUST00000119596 212 ntBASIC2.58□□□□□ -2
Chmp6P0C0A3 Olfr381-202ENSMUST00000119863 1065 ntAPPRIS P1 TSL 3 BASIC2.58□□□□□ -2
Chmp6P0C0A3 Gm14989-201ENSMUST00000120497 207 ntBASIC2.58□□□□□ -2
Chmp6P0C0A3 Gm11384-201ENSMUST00000121376 303 ntBASIC2.58□□□□□ -2
Chmp6P0C0A3 Gm11998-201ENSMUST00000146304 972 ntTSL 1 (best) BASIC2.58□□□□□ -2
Chmp6P0C0A3 4933406D12Rik-201ENSMUST00000147212 737 ntTSL 1 (best) BASIC2.58□□□□□ -2
Chmp6P0C0A3 Gm22947-201ENSMUST00000158559 91 ntBASIC2.58□□□□□ -2
Chmp6P0C0A3 Gm17162-201ENSMUST00000168538 473 ntBASIC2.58□□□□□ -2
Chmp6P0C0A3 Gm26195-201ENSMUST00000175035 101 ntBASIC2.58□□□□□ -2
Chmp6P0C0A3 Gm37578-201ENSMUST00000192256 1177 ntBASIC2.58□□□□□ -2
Chmp6P0C0A3 Gm44966-201ENSMUST00000208096 157 ntBASIC2.58□□□□□ -2
Chmp6P0C0A3 Olfr946-ps1-201ENSMUST00000217547 341 ntBASIC2.58□□□□□ -2
Chmp6P0C0A3 4930520P13Rik-201ENSMUST00000222622 505 ntTSL 1 (best) BASIC2.58□□□□□ -2
Chmp6P0C0A3 n-R5s79-201ENSMUST00000083071 120 ntBASIC2.58□□□□□ -2
Chmp6P0C0A3 Mir208a-201ENSMUST00000083498 83 ntBASIC2.58□□□□□ -2
Chmp6P0C0A3 Olfr1313-203ENSMUST00000216071 2599 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Chmp6P0C0A3 Gm42659-201ENSMUST00000196955 1754 ntBASIC2.58□□□□□ -2
Chmp6P0C0A3 AC157570.1-201ENSMUST00000218052 3778 ntBASIC2.58□□□□□ -2
Chmp6P0C0A3 Vmn2r65-201ENSMUST00000044583 2538 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Chmp6P0C0A3 Olfr110-201ENSMUST00000168318 1639 ntAPPRIS P1 TSL 2 BASIC2.57□□□□□ -2
Chmp6P0C0A3 Olfr869-201ENSMUST00000213024 1783 ntAPPRIS P1 TSL 2 BASIC2.57□□□□□ -2
Chmp6P0C0A3 Ifi203-202ENSMUST00000081216 3610 ntAPPRIS P3 TSL 1 (best) BASIC2.57□□□□□ -2
Chmp6P0C0A3 Gm22674-201ENSMUST00000104413 131 ntBASIC2.57□□□□□ -2
Chmp6P0C0A3 Gm14918-201ENSMUST00000118153 268 ntBASIC2.57□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 77.9 ms