Protein–RNA interactions for Protein: P08121

Col3a1, Collagen alpha-1(III) chain, mousemouse

Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1P08121 AC154510.1-201ENSMUST00000223925 737 ntBASIC3.44□□□□□ -1.86
Col3a1P08121 AC154257.2-201ENSMUST00000224166 340 ntBASIC3.44□□□□□ -1.86
Col3a1P08121 Olfr348-201ENSMUST00000056865 942 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
Col3a1P08121 Fam71d-201ENSMUST00000077968 1772 ntAPPRIS P2 TSL 1 (best) BASIC3.44□□□□□ -1.86
Col3a1P08121 Chst9-201ENSMUST00000053017 1620 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
Col3a1P08121 Olfr149-202ENSMUST00000215192 2806 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
Col3a1P08121 Gm21033-201ENSMUST00000208590 2608 ntBASIC3.43□□□□□ -1.86
Col3a1P08121 Gm37626-201ENSMUST00000194332 4563 ntBASIC3.43□□□□□ -1.86
Col3a1P08121 Gm14416-201ENSMUST00000118630 2308 ntBASIC3.43□□□□□ -1.86
Col3a1P08121 Mir680-3-201ENSMUST00000102298 87 ntBASIC3.43□□□□□ -1.86
Col3a1P08121 Olfr260-ps1-201ENSMUST00000117279 822 ntBASIC3.43□□□□□ -1.86
Col3a1P08121 Gm13349-201ENSMUST00000118436 411 ntBASIC3.43□□□□□ -1.86
Col3a1P08121 Gm12515-201ENSMUST00000120116 361 ntBASIC3.43□□□□□ -1.86
Col3a1P08121 Gm14333-201ENSMUST00000130484 264 ntBASIC3.43□□□□□ -1.86
Col3a1P08121 Gm3848-202ENSMUST00000151564 301 ntTSL 3 BASIC3.43□□□□□ -1.86
Col3a1P08121 Gm24443-201ENSMUST00000157242 132 ntBASIC3.43□□□□□ -1.86
Col3a1P08121 Gm23268-201ENSMUST00000175494 78 ntBASIC3.43□□□□□ -1.86
Col3a1P08121 Gm5709-201ENSMUST00000177879 1165 ntBASIC3.43□□□□□ -1.86
Col3a1P08121 Gm33354-201ENSMUST00000195448 906 ntBASIC3.43□□□□□ -1.86
Col3a1P08121 AC154296.2-201ENSMUST00000214696 545 ntBASIC3.43□□□□□ -1.86
Col3a1P08121 Gm46234-201ENSMUST00000218702 259 ntBASIC3.43□□□□□ -1.86
Col3a1P08121 AC116589.7-201ENSMUST00000221061 239 ntBASIC3.43□□□□□ -1.86
Col3a1P08121 AC164117.1-201ENSMUST00000221726 239 ntBASIC3.43□□□□□ -1.86
Col3a1P08121 Scai-201ENSMUST00000038874 10709 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
Col3a1P08121 Gm44689-201ENSMUST00000208786 1372 ntTSL 5 BASIC3.43□□□□□ -1.86
Col3a1P08121 Gm45577-201ENSMUST00000210206 2287 ntBASIC3.43□□□□□ -1.86
Col3a1P08121 Olfr653-202ENSMUST00000215585 4765 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
Col3a1P08121 Olfr849-202ENSMUST00000217273 6140 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
Col3a1P08121 2610300M13Rik-202ENSMUST00000203716 1787 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
Col3a1P08121 6720427I07Rik-201ENSMUST00000181490 2300 ntBASIC3.43□□□□□ -1.86
Col3a1P08121 Lrp1b-209ENSMUST00000185258 1874 ntTSL 5 BASIC3.43□□□□□ -1.86
Col3a1P08121 Olfr937-202ENSMUST00000215049 2259 ntAPPRIS P1 TSL 3 BASIC3.43□□□□□ -1.86
Col3a1P08121 Olfr33-202ENSMUST00000216312 2372 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
Col3a1P08121 Olfr1174-ps-201ENSMUST00000213348 1738 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
Col3a1P08121 Gm25500-201ENSMUST00000104426 123 ntBASIC3.42□□□□□ -1.86
Col3a1P08121 Gm26342-201ENSMUST00000104557 129 ntBASIC3.42□□□□□ -1.86
Col3a1P08121 Gm14897-201ENSMUST00000118213 207 ntBASIC3.42□□□□□ -1.86
Col3a1P08121 Gm11352-201ENSMUST00000119264 517 ntBASIC3.42□□□□□ -1.86
Col3a1P08121 Gm12607-201ENSMUST00000120724 493 ntBASIC3.42□□□□□ -1.86
Col3a1P08121 Nell1os-201ENSMUST00000134584 489 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
Col3a1P08121 Gm13942-201ENSMUST00000136950 325 ntTSL 3 BASIC3.42□□□□□ -1.86
Col3a1P08121 Gm24291-201ENSMUST00000157633 162 ntBASIC3.42□□□□□ -1.86
Col3a1P08121 Gm24901-201ENSMUST00000158125 110 ntBASIC3.42□□□□□ -1.86
Col3a1P08121 Trbv10-201ENSMUST00000168322 289 ntBASIC3.42□□□□□ -1.86
Col3a1P08121 Mir7013-201ENSMUST00000183540 72 ntBASIC3.42□□□□□ -1.86
Col3a1P08121 Mir7242-201ENSMUST00000183710 79 ntBASIC3.42□□□□□ -1.86
Col3a1P08121 Gm27188-201ENSMUST00000184383 510 ntTSL 3 BASIC3.42□□□□□ -1.86
Col3a1P08121 Gm29556-201ENSMUST00000187591 696 ntBASIC3.42□□□□□ -1.86
Col3a1P08121 Gm29023-201ENSMUST00000190543 325 ntTSL 5 BASIC3.42□□□□□ -1.86
Col3a1P08121 Gm37586-201ENSMUST00000193654 204 ntBASIC3.42□□□□□ -1.86
Col3a1P08121 Gm2762-205ENSMUST00000202366 356 ntTSL 3 BASIC3.42□□□□□ -1.86
Col3a1P08121 Gm45189-201ENSMUST00000208567 363 ntBASIC3.42□□□□□ -1.86
Col3a1P08121 Vmn2r-ps50-201ENSMUST00000209317 120 ntBASIC3.42□□□□□ -1.86
Col3a1P08121 Gm18602-201ENSMUST00000209794 851 ntBASIC3.42□□□□□ -1.86
Col3a1P08121 AC156560.3-201ENSMUST00000222978 3841 ntBASIC3.42□□□□□ -1.86
Col3a1P08121 Olfr339-201ENSMUST00000071437 930 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
Col3a1P08121 Gm8074-201ENSMUST00000095071 252 ntBASIC3.42□□□□□ -1.86
Col3a1P08121 Gm38278-201ENSMUST00000194715 1365 ntBASIC3.42□□□□□ -1.86
Col3a1P08121 Csn1s1-205ENSMUST00000197631 1359 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
Col3a1P08121 Gm38382-201ENSMUST00000193790 2499 ntBASIC3.42□□□□□ -1.86
Col3a1P08121 Gulp1-206ENSMUST00000162600 2798 ntTSL 5 BASIC3.42□□□□□ -1.86
Col3a1P08121 Olfr1183-203ENSMUST00000219871 8353 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
Col3a1P08121 Gm37393-201ENSMUST00000195118 3870 ntBASIC3.42□□□□□ -1.86
Col3a1P08121 Gm12128-201ENSMUST00000131013 2914 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
Col3a1P08121 Gm5141-202ENSMUST00000201047 3279 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
Col3a1P08121 Acsm3-201ENSMUST00000063770 2651 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
Col3a1P08121 Olfr1308-202ENSMUST00000207560 2093 ntAPPRIS P1 TSL 3 BASIC3.42□□□□□ -1.86
Col3a1P08121 Rtl4-201ENSMUST00000096301 1758 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
Col3a1P08121 Mir759-201ENSMUST00000103254 98 ntBASIC3.41□□□□□ -1.86
Col3a1P08121 Gm14392-201ENSMUST00000120332 401 ntBASIC3.41□□□□□ -1.86
Col3a1P08121 Gm12924-201ENSMUST00000121747 318 ntBASIC3.41□□□□□ -1.86
Col3a1P08121 Gm25294-201ENSMUST00000122791 104 ntBASIC3.41□□□□□ -1.86
Col3a1P08121 Gm15903-201ENSMUST00000155796 310 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
Col3a1P08121 Gm22961-201ENSMUST00000157964 106 ntBASIC3.41□□□□□ -1.86
Col3a1P08121 2310075C17Rik-201ENSMUST00000161216 326 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
Col3a1P08121 Ranbp2-ps6-201ENSMUST00000183722 381 ntBASIC3.41□□□□□ -1.86
Col3a1P08121 Gm27796-201ENSMUST00000183863 261 ntBASIC3.41□□□□□ -1.86
Col3a1P08121 Snhg14-203ENSMUST00000185815 670 ntTSL 5 BASIC3.41□□□□□ -1.86
Col3a1P08121 Gm28500-201ENSMUST00000190286 151 ntBASIC3.41□□□□□ -1.86
Col3a1P08121 Gm1833-201ENSMUST00000191608 682 ntBASIC3.41□□□□□ -1.86
Col3a1P08121 Gm43026-201ENSMUST00000202972 325 ntBASIC3.41□□□□□ -1.86
Col3a1P08121 Gm29818-201ENSMUST00000218070 165 ntBASIC3.41□□□□□ -1.86
Col3a1P08121 AC101677.1-201ENSMUST00000218590 158 ntBASIC3.41□□□□□ -1.86
Col3a1P08121 AC144942.1-201ENSMUST00000220425 597 ntTSL 5 BASIC3.41□□□□□ -1.86
Col3a1P08121 AC132954.1-201ENSMUST00000221017 342 ntBASIC3.41□□□□□ -1.86
Col3a1P08121 AC174082.1-201ENSMUST00000221106 307 ntBASIC3.41□□□□□ -1.86
Col3a1P08121 Gm39473-201ENSMUST00000223498 522 ntTSL 3 BASIC3.41□□□□□ -1.86
Col3a1P08121 Gm23623-201ENSMUST00000082461 107 ntBASIC3.41□□□□□ -1.86
Col3a1P08121 Zfp442-202ENSMUST00000185796 1833 ntTSL 5 BASIC3.41□□□□□ -1.86
Col3a1P08121 Vmn1r71-208ENSMUST00000228374 3717 ntAPPRIS P2 BASIC3.41□□□□□ -1.86
Col3a1P08121 Olfr1193-202ENSMUST00000213893 3519 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Col3a1P08121 Gm650-201ENSMUST00000144428 1551 ntBASIC3.41□□□□□ -1.86
Col3a1P08121 Zfp967-202ENSMUST00000178443 1458 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
Col3a1P08121 Zfp969-203ENSMUST00000179061 1458 ntAPPRIS P1 TSL 3 BASIC3.41□□□□□ -1.86
Col3a1P08121 Gm6215-201ENSMUST00000119297 1386 ntBASIC3.41□□□□□ -1.86
Col3a1P08121 Gm7905-201ENSMUST00000119933 1386 ntBASIC3.41□□□□□ -1.86
Col3a1P08121 Gm6207-201ENSMUST00000120075 1386 ntBASIC3.41□□□□□ -1.86
Col3a1P08121 Gm6228-201ENSMUST00000178856 1386 ntBASIC3.41□□□□□ -1.86
Col3a1P08121 Gm6221-201ENSMUST00000180064 1386 ntBASIC3.41□□□□□ -1.86
Col3a1P08121 Olfr1222-202ENSMUST00000214027 2393 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Retrieved 100 of 76,532 protein–RNA pairs in 84.3 ms