Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 Gm37578-201ENSMUST00000192256 1177 ntBASIC2.48□□□□□ -2.01
TnfP06804 Gm37987-201ENSMUST00000194999 825 ntBASIC2.48□□□□□ -2.01
TnfP06804 Gm37062-201ENSMUST00000195028 701 ntTSL 5 BASIC2.48□□□□□ -2.01
TnfP06804 Gm37102-201ENSMUST00000195740 1105 ntBASIC2.48□□□□□ -2.01
TnfP06804 Mir378a-201ENSMUST00000198300 66 ntBASIC2.48□□□□□ -2.01
TnfP06804 Gm43301-201ENSMUST00000198918 778 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
TnfP06804 Gm44615-201ENSMUST00000206548 358 ntBASIC2.48□□□□□ -2.01
TnfP06804 Olfr528-ps1-201ENSMUST00000211655 728 ntBASIC2.48□□□□□ -2.01
TnfP06804 Gm45439-201ENSMUST00000211723 359 ntBASIC2.48□□□□□ -2.01
TnfP06804 5430401H09Rik-201ENSMUST00000218145 1076 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
TnfP06804 AC129017.1-201ENSMUST00000228363 270 ntBASIC2.48□□□□□ -2.01
TnfP06804 AC165415.1-201ENSMUST00000228924 273 ntBASIC2.48□□□□□ -2.01
TnfP06804 C230088H06Rik-202ENSMUST00000181752 3010 ntTSL 5 BASIC2.48□□□□□ -2.01
TnfP06804 Gm13757-202ENSMUST00000179450 4383 ntAPPRIS P1 TSL 2 BASIC2.48□□□□□ -2.01
TnfP06804 Gm44679-201ENSMUST00000207202 2908 ntBASIC2.48□□□□□ -2.01
TnfP06804 Vmn2r71-201ENSMUST00000172338 2568 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
TnfP06804 C030005K15Rik-201ENSMUST00000166373 1882 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
TnfP06804 Olfr509-202ENSMUST00000213756 3547 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
TnfP06804 Olfr1051-203ENSMUST00000217245 2821 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
TnfP06804 Thoc2-201ENSMUST00000047037 7622 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
TnfP06804 Ifi203-201ENSMUST00000042228 3754 ntAPPRIS ALT2 TSL 1 (best) BASIC2.47□□□□□ -2.01
TnfP06804 AC123052.1-201ENSMUST00000220604 4616 ntBASIC2.47□□□□□ -2.01
TnfP06804 Gm25526-201ENSMUST00000104332 132 ntBASIC2.47□□□□□ -2.01
TnfP06804 Gm23551-201ENSMUST00000116852 121 ntBASIC2.47□□□□□ -2.01
TnfP06804 Gm14751-201ENSMUST00000117693 222 ntBASIC2.47□□□□□ -2.01
TnfP06804 Rpl23a-ps6-201ENSMUST00000119466 468 ntBASIC2.47□□□□□ -2.01
TnfP06804 Gm14128-201ENSMUST00000119514 1011 ntBASIC2.47□□□□□ -2.01
TnfP06804 Gm12155-201ENSMUST00000121267 160 ntBASIC2.47□□□□□ -2.01
TnfP06804 Gm12956-201ENSMUST00000122184 414 ntBASIC2.47□□□□□ -2.01
TnfP06804 Gm12238-201ENSMUST00000127764 124 ntBASIC2.47□□□□□ -2.01
TnfP06804 Gm13200-201ENSMUST00000138802 258 ntTSL 3 BASIC2.47□□□□□ -2.01
TnfP06804 Gm14651-201ENSMUST00000147192 442 ntBASIC2.47□□□□□ -2.01
TnfP06804 Gm16354-201ENSMUST00000155376 150 ntBASIC2.47□□□□□ -2.01
TnfP06804 Gm20698-201ENSMUST00000175657 233 ntBASIC2.47□□□□□ -2.01
TnfP06804 Mir6402-201ENSMUST00000183406 80 ntBASIC2.47□□□□□ -2.01
TnfP06804 Mir6541-201ENSMUST00000183649 110 ntBASIC2.47□□□□□ -2.01
TnfP06804 Gm29641-201ENSMUST00000188955 259 ntBASIC2.47□□□□□ -2.01
TnfP06804 Gm43562-201ENSMUST00000196439 238 ntTSL 3 BASIC2.47□□□□□ -2.01
TnfP06804 Gm19202-201ENSMUST00000198096 808 ntBASIC2.47□□□□□ -2.01
TnfP06804 Gm15235-201ENSMUST00000200572 194 ntBASIC2.47□□□□□ -2.01
TnfP06804 Gm17850-201ENSMUST00000210023 1154 ntBASIC2.47□□□□□ -2.01
TnfP06804 Gm46193-201ENSMUST00000219399 364 ntBASIC2.47□□□□□ -2.01
TnfP06804 Olfr916-201ENSMUST00000081196 933 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
TnfP06804 Gm25130-201ENSMUST00000082650 156 ntBASIC2.47□□□□□ -2.01
TnfP06804 Sult3a1-201ENSMUST00000092597 1047 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
TnfP06804 Gm15975-201ENSMUST00000122385 1402 ntBASIC2.47□□□□□ -2.01
TnfP06804 AC164164.1-201ENSMUST00000223245 2340 ntBASIC2.47□□□□□ -2.01
TnfP06804 Rgs1-208ENSMUST00000189061 3841 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
TnfP06804 A330044P14Rik-201ENSMUST00000176108 2706 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
TnfP06804 Olfr1051-202ENSMUST00000216432 2807 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.01
TnfP06804 Cyp3a41a-201ENSMUST00000094111 2060 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.01
TnfP06804 Snora36b-201ENSMUST00000104383 132 ntBASIC2.46□□□□□ -2.02
TnfP06804 Gm15090-201ENSMUST00000118787 1196 ntBASIC2.46□□□□□ -2.02
TnfP06804 Gm14940-201ENSMUST00000119309 495 ntBASIC2.46□□□□□ -2.02
TnfP06804 Gm12607-201ENSMUST00000120724 493 ntBASIC2.46□□□□□ -2.02
TnfP06804 Gm15089-201ENSMUST00000122332 1196 ntBASIC2.46□□□□□ -2.02
TnfP06804 Gm24937-201ENSMUST00000122597 134 ntBASIC2.46□□□□□ -2.02
TnfP06804 Gm14254-201ENSMUST00000136371 296 ntTSL 5 BASIC2.46□□□□□ -2.02
TnfP06804 1700036O09Rik-201ENSMUST00000136834 349 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
TnfP06804 Gm12914-201ENSMUST00000148635 305 ntTSL 5 BASIC2.46□□□□□ -2.02
TnfP06804 Gm20513-201ENSMUST00000174074 537 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
TnfP06804 Gm21827-201ENSMUST00000178247 423 ntBASIC2.46□□□□□ -2.02
TnfP06804 Mir6371-201ENSMUST00000184470 111 ntBASIC2.46□□□□□ -2.02
TnfP06804 Gm6801-201ENSMUST00000190697 339 ntBASIC2.46□□□□□ -2.02
TnfP06804 Gm38231-201ENSMUST00000192030 347 ntBASIC2.46□□□□□ -2.02
TnfP06804 Gm34648-201ENSMUST00000202460 338 ntTSL 2 BASIC2.46□□□□□ -2.02
TnfP06804 Gm19252-201ENSMUST00000204705 305 ntBASIC2.46□□□□□ -2.02
TnfP06804 Olfr278-ps1-201ENSMUST00000205676 238 ntBASIC2.46□□□□□ -2.02
TnfP06804 AC154262.1-201ENSMUST00000225976 286 ntBASIC2.46□□□□□ -2.02
TnfP06804 AC133076.1-201ENSMUST00000228074 484 ntBASIC2.46□□□□□ -2.02
TnfP06804 AC168062.2-201ENSMUST00000228907 422 ntBASIC2.46□□□□□ -2.02
TnfP06804 Defb21-201ENSMUST00000070722 427 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
TnfP06804 Gm9174-201ENSMUST00000078149 255 ntBASIC2.46□□□□□ -2.02
TnfP06804 Olfr135-202ENSMUST00000213217 2917 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
TnfP06804 Sult2a8-203ENSMUST00000168252 2097 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
TnfP06804 Vmn2r68-201ENSMUST00000061074 2556 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
TnfP06804 Gm13212-202ENSMUST00000105739 3595 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
TnfP06804 Gm25979-201ENSMUST00000157177 138 ntBASIC2.45□□□□□ -2.02
TnfP06804 Gm6395-201ENSMUST00000167639 691 ntBASIC2.45□□□□□ -2.02
TnfP06804 Mir7050-201ENSMUST00000184636 60 ntBASIC2.45□□□□□ -2.02
TnfP06804 1700010I02Rik-202ENSMUST00000188525 430 ntTSL 3 BASIC2.45□□□□□ -2.02
TnfP06804 2900035J10Rik-201ENSMUST00000194966 532 ntBASIC2.45□□□□□ -2.02
TnfP06804 Gm44392-201ENSMUST00000196758 115 ntBASIC2.45□□□□□ -2.02
TnfP06804 Olfr210-ps1-201ENSMUST00000203138 905 ntBASIC2.45□□□□□ -2.02
TnfP06804 Gm45048-201ENSMUST00000207058 429 ntBASIC2.45□□□□□ -2.02
TnfP06804 Gm44844-201ENSMUST00000207242 336 ntBASIC2.45□□□□□ -2.02
TnfP06804 Gm39469-201ENSMUST00000214845 461 ntTSL 2 BASIC2.45□□□□□ -2.02
TnfP06804 AC155634.2-201ENSMUST00000222001 489 ntTSL 3 BASIC2.45□□□□□ -2.02
TnfP06804 Gm40548-201ENSMUST00000223522 644 ntTSL 3 BASIC2.45□□□□□ -2.02
TnfP06804 AC147633.1-201ENSMUST00000225134 259 ntBASIC2.45□□□□□ -2.02
TnfP06804 Gm6369-201ENSMUST00000069626 412 ntBASIC2.45□□□□□ -2.02
TnfP06804 Gm22806-201ENSMUST00000082738 136 ntBASIC2.45□□□□□ -2.02
TnfP06804 Mir350-201ENSMUST00000083639 99 ntBASIC2.45□□□□□ -2.02
TnfP06804 Zfp280c-202ENSMUST00000076635 4355 ntAPPRIS P3 TSL 1 (best) BASIC2.45□□□□□ -2.02
TnfP06804 Gm38162-201ENSMUST00000195562 4597 ntBASIC2.44□□□□□ -2.02
TnfP06804 Hif1a-202ENSMUST00000110461 4385 ntAPPRIS ALT2 TSL 1 (best) BASIC2.44□□□□□ -2.02
TnfP06804 Gm14918-201ENSMUST00000118153 268 ntBASIC2.44□□□□□ -2.02
TnfP06804 Gm13085-201ENSMUST00000118356 171 ntBASIC2.44□□□□□ -2.02
TnfP06804 Gm11219-201ENSMUST00000118565 358 ntBASIC2.44□□□□□ -2.02
TnfP06804 Gm12016-201ENSMUST00000119079 681 ntBASIC2.44□□□□□ -2.02
Retrieved 100 of 76,532 protein–RNA pairs in 81.6 ms