Protein–RNA interactions for Protein: O55187

Cbx4, E3 SUMO-protein ligase CBX4, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx4O55187 Gm24008-201ENSMUST00000157733 138 ntBASIC3.32□□□□□ -1.88
Cbx4O55187 Gm23016-201ENSMUST00000158431 62 ntBASIC3.32□□□□□ -1.88
Cbx4O55187 Gm24546-201ENSMUST00000158652 102 ntBASIC3.32□□□□□ -1.88
Cbx4O55187 Gm26005-201ENSMUST00000158802 134 ntBASIC3.32□□□□□ -1.88
Cbx4O55187 Nron-204ENSMUST00000158971 370 ntBASIC3.32□□□□□ -1.88
Cbx4O55187 Trav7d-4-201ENSMUST00000178768 451 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Cbx4O55187 Trav7-4-201ENSMUST00000181728 451 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Cbx4O55187 Gm28959-201ENSMUST00000186713 551 ntTSL 5 BASIC3.32□□□□□ -1.88
Cbx4O55187 Gm28654-201ENSMUST00000189801 379 ntBASIC3.32□□□□□ -1.88
Cbx4O55187 Gm2189-201ENSMUST00000201419 429 ntBASIC3.32□□□□□ -1.88
Cbx4O55187 Olfr439-ps1-201ENSMUST00000204679 307 ntBASIC3.32□□□□□ -1.88
Cbx4O55187 Gm18423-201ENSMUST00000205144 1074 ntBASIC3.32□□□□□ -1.88
Cbx4O55187 Gm45080-201ENSMUST00000206648 283 ntBASIC3.32□□□□□ -1.88
Cbx4O55187 CT030247.1-201ENSMUST00000216810 267 ntBASIC3.32□□□□□ -1.88
Cbx4O55187 Gm5175-202ENSMUST00000219699 529 ntBASIC3.32□□□□□ -1.88
Cbx4O55187 Gm20102-201ENSMUST00000222445 220 ntBASIC3.32□□□□□ -1.88
Cbx4O55187 Gm23627-201ENSMUST00000082459 107 ntBASIC3.32□□□□□ -1.88
Cbx4O55187 Gm22502-201ENSMUST00000082488 107 ntBASIC3.32□□□□□ -1.88
Cbx4O55187 Gm22977-201ENSMUST00000082615 107 ntBASIC3.32□□□□□ -1.88
Cbx4O55187 Gm24149-201ENSMUST00000082757 107 ntBASIC3.32□□□□□ -1.88
Cbx4O55187 n-R5s220-201ENSMUST00000082926 120 ntBASIC3.32□□□□□ -1.88
Cbx4O55187 Chst9-201ENSMUST00000053017 1620 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Cbx4O55187 Btbd35f3-201ENSMUST00000140300 1943 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Cbx4O55187 Olfr397-204ENSMUST00000216291 4168 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Cbx4O55187 Vmn1r178-203ENSMUST00000226489 2644 ntBASIC3.31□□□□□ -1.88
Cbx4O55187 Pkhd1l1-202ENSMUST00000166957 12747 ntTSL 5 BASIC3.31□□□□□ -1.88
Cbx4O55187 Pkhd1l1-201ENSMUST00000038336 12741 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Cbx4O55187 Olfr1079-203ENSMUST00000216480 2071 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
Cbx4O55187 Gm381-201ENSMUST00000117443 2037 ntBASIC3.31□□□□□ -1.88
Cbx4O55187 Mga-202ENSMUST00000079934 13304 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
Cbx4O55187 AI504432-201ENSMUST00000070085 5569 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Cbx4O55187 Olfr1471-204ENSMUST00000217249 1662 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Cbx4O55187 Gm4224-201ENSMUST00000211557 1594 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Cbx4O55187 Zfp971-202ENSMUST00000108926 1413 ntAPPRIS P1 TSL 3 BASIC3.31□□□□□ -1.88
Cbx4O55187 Gm12025-201ENSMUST00000117768 144 ntBASIC3.31□□□□□ -1.88
Cbx4O55187 Gm14687-201ENSMUST00000120206 363 ntBASIC3.31□□□□□ -1.88
Cbx4O55187 Gm11254-201ENSMUST00000122368 653 ntBASIC3.31□□□□□ -1.88
Cbx4O55187 Gm17162-201ENSMUST00000168538 473 ntBASIC3.31□□□□□ -1.88
Cbx4O55187 BC028528-205ENSMUST00000171519 447 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
Cbx4O55187 Mir5129-201ENSMUST00000174938 78 ntBASIC3.31□□□□□ -1.88
Cbx4O55187 Gm26195-201ENSMUST00000175035 101 ntBASIC3.31□□□□□ -1.88
Cbx4O55187 Pcgf1-204ENSMUST00000176089 492 ntTSL 5 BASIC3.31□□□□□ -1.88
Cbx4O55187 Mir6951-201ENSMUST00000183910 75 ntBASIC3.31□□□□□ -1.88
Cbx4O55187 Gm29330-201ENSMUST00000190032 699 ntBASIC3.31□□□□□ -1.88
Cbx4O55187 Gm37455-201ENSMUST00000191993 529 ntBASIC3.31□□□□□ -1.88
Cbx4O55187 Gm32340-201ENSMUST00000192883 259 ntBASIC3.31□□□□□ -1.88
Cbx4O55187 Gm17966-201ENSMUST00000193453 594 ntBASIC3.31□□□□□ -1.88
Cbx4O55187 Smcp-202ENSMUST00000194965 744 ntAPPRIS P1 TSL 3 BASIC3.31□□□□□ -1.88
Cbx4O55187 Gm34838-201ENSMUST00000209231 958 ntTSL 5 BASIC3.31□□□□□ -1.88
Cbx4O55187 AC154600.1-201ENSMUST00000226480 714 ntBASIC3.31□□□□□ -1.88
Cbx4O55187 Ssxa1-201ENSMUST00000072593 433 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Cbx4O55187 Gm4987-201ENSMUST00000078326 408 ntBASIC3.31□□□□□ -1.88
Cbx4O55187 Olfr1204-201ENSMUST00000078631 930 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Cbx4O55187 Gm22304-201ENSMUST00000082688 129 ntBASIC3.31□□□□□ -1.88
Cbx4O55187 Smcp-201ENSMUST00000098888 861 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Cbx4O55187 Olfr1156-201ENSMUST00000099842 1076 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Cbx4O55187 4930533N22Rik-201ENSMUST00000206433 3509 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Cbx4O55187 Lrrd1-201ENSMUST00000044039 2951 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Cbx4O55187 Olfr729-203ENSMUST00000215327 4220 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Cbx4O55187 Olfr729-204ENSMUST00000215451 4236 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Cbx4O55187 Gabra2-203ENSMUST00000197284 5852 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Cbx4O55187 Gm31592-201ENSMUST00000217529 3471 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Cbx4O55187 Vmn1r89-208ENSMUST00000228587 2061 ntAPPRIS P2 BASIC3.31□□□□□ -1.88
Cbx4O55187 Gm8011-201ENSMUST00000172163 1751 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Cbx4O55187 Olfr136-202ENSMUST00000208525 2534 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Cbx4O55187 Gm15319-201ENSMUST00000084046 2522 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Cbx4O55187 Ankrd28-207ENSMUST00000227863 6616 ntAPPRIS ALT1 BASIC3.3□□□□□ -1.88
Cbx4O55187 Gm24096-201ENSMUST00000103905 110 ntBASIC3.3□□□□□ -1.88
Cbx4O55187 Atp5j-203ENSMUST00000114193 680 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
Cbx4O55187 Gm13475-201ENSMUST00000119290 234 ntBASIC3.3□□□□□ -1.88
Cbx4O55187 Gm12515-201ENSMUST00000120116 361 ntBASIC3.3□□□□□ -1.88
Cbx4O55187 Gemin6-ps-201ENSMUST00000120444 501 ntBASIC3.3□□□□□ -1.88
Cbx4O55187 Gm15147-201ENSMUST00000122263 483 ntBASIC3.3□□□□□ -1.88
Cbx4O55187 Gm23234-201ENSMUST00000157304 134 ntBASIC3.3□□□□□ -1.88
Cbx4O55187 Gm25341-201ENSMUST00000157461 268 ntBASIC3.3□□□□□ -1.88
Cbx4O55187 Gm25637-201ENSMUST00000157529 107 ntBASIC3.3□□□□□ -1.88
Cbx4O55187 Gm25335-201ENSMUST00000158043 103 ntBASIC3.3□□□□□ -1.88
Cbx4O55187 Gm23024-201ENSMUST00000158770 292 ntBASIC3.3□□□□□ -1.88
Cbx4O55187 Pate1-201ENSMUST00000170021 389 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Cbx4O55187 Gm3370-201ENSMUST00000171785 500 ntBASIC3.3□□□□□ -1.88
Cbx4O55187 Gm20543-201ENSMUST00000174200 726 ntBASIC3.3□□□□□ -1.88
Cbx4O55187 Gm24811-201ENSMUST00000175313 100 ntBASIC3.3□□□□□ -1.88
Cbx4O55187 Gm22108-201ENSMUST00000177961 106 ntBASIC3.3□□□□□ -1.88
Cbx4O55187 Zfp131-202ENSMUST00000178271 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
Cbx4O55187 Gm24798-201ENSMUST00000179334 106 ntBASIC3.3□□□□□ -1.88
Cbx4O55187 Gm23523-201ENSMUST00000180190 107 ntBASIC3.3□□□□□ -1.88
Cbx4O55187 Ranbp2-ps2-201ENSMUST00000184379 370 ntBASIC3.3□□□□□ -1.88
Cbx4O55187 Gm28399-201ENSMUST00000186221 318 ntBASIC3.3□□□□□ -1.88
Cbx4O55187 Gm28572-201ENSMUST00000187444 318 ntBASIC3.3□□□□□ -1.88
Cbx4O55187 Gm19777-201ENSMUST00000191940 358 ntBASIC3.3□□□□□ -1.88
Cbx4O55187 Gm34732-201ENSMUST00000195441 445 ntTSL 3 BASIC3.3□□□□□ -1.88
Cbx4O55187 Gm42621-201ENSMUST00000198114 275 ntBASIC3.3□□□□□ -1.88
Cbx4O55187 Gm19147-201ENSMUST00000199622 652 ntBASIC3.3□□□□□ -1.88
Cbx4O55187 4930402F11Rik-203ENSMUST00000208289 606 ntTSL 3 BASIC3.3□□□□□ -1.88
Cbx4O55187 Gm39147-201ENSMUST00000211376 465 ntBASIC3.3□□□□□ -1.88
Cbx4O55187 Olfr1091-ps1-201ENSMUST00000216676 595 ntBASIC3.3□□□□□ -1.88
Cbx4O55187 Gm33680-201ENSMUST00000219336 576 ntTSL 5 BASIC3.3□□□□□ -1.88
Cbx4O55187 AC159203.2-201ENSMUST00000221326 193 ntBASIC3.3□□□□□ -1.88
Cbx4O55187 AC134577.1-201ENSMUST00000227572 295 ntBASIC3.3□□□□□ -1.88
Cbx4O55187 Olfr769-201ENSMUST00000050915 1084 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 121.8 ms