Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Traj39-201ENSMUST00000103703 63 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
Hmgb3O54879 Gm24122-201ENSMUST00000104107 132 ntBASIC1.63□□□□□ -2.15
Hmgb3O54879 Igkv13-87-201ENSMUST00000114214 286 ntBASIC1.63□□□□□ -2.15
Hmgb3O54879 Gm16431-201ENSMUST00000117454 431 ntBASIC1.63□□□□□ -2.15
Hmgb3O54879 Gm15029-201ENSMUST00000119742 199 ntBASIC1.63□□□□□ -2.15
Hmgb3O54879 Gm12591-201ENSMUST00000122407 1177 ntBASIC1.63□□□□□ -2.15
Hmgb3O54879 Gm22792-201ENSMUST00000157225 133 ntBASIC1.63□□□□□ -2.15
Hmgb3O54879 Gm24922-201ENSMUST00000158511 102 ntBASIC1.63□□□□□ -2.15
Hmgb3O54879 Gm23342-201ENSMUST00000158958 115 ntBASIC1.63□□□□□ -2.15
Hmgb3O54879 H3f3aos-202ENSMUST00000159740 229 ntTSL 5 BASIC1.63□□□□□ -2.15
Hmgb3O54879 Snrpe-203ENSMUST00000166291 360 ntTSL 3 BASIC1.63□□□□□ -2.15
Hmgb3O54879 Gm25026-201ENSMUST00000175017 188 ntBASIC1.63□□□□□ -2.15
Hmgb3O54879 Mir3473c-201ENSMUST00000175262 81 ntBASIC1.63□□□□□ -2.15
Hmgb3O54879 Gm22307-201ENSMUST00000180019 107 ntBASIC1.63□□□□□ -2.15
Hmgb3O54879 Gm29452-201ENSMUST00000187996 313 ntBASIC1.63□□□□□ -2.15
Hmgb3O54879 Gm28860-201ENSMUST00000188103 313 ntBASIC1.63□□□□□ -2.15
Hmgb3O54879 Olfr1556-ps1-201ENSMUST00000204688 466 ntBASIC1.63□□□□□ -2.15
Hmgb3O54879 Gm43865-201ENSMUST00000204721 127 ntBASIC1.63□□□□□ -2.15
Hmgb3O54879 Olfr546-ps1-201ENSMUST00000210328 326 ntBASIC1.63□□□□□ -2.15
Hmgb3O54879 Olfr196-201ENSMUST00000077027 930 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
Hmgb3O54879 Snord14d-201ENSMUST00000083424 86 ntBASIC1.63□□□□□ -2.15
Hmgb3O54879 Vmn1r78-203ENSMUST00000228664 8100 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
Hmgb3O54879 Gm14405-201ENSMUST00000117808 2330 ntBASIC1.63□□□□□ -2.15
Hmgb3O54879 Gm43498-201ENSMUST00000202002 1486 ntBASIC1.63□□□□□ -2.15
Hmgb3O54879 Gm42536-201ENSMUST00000197562 1613 ntBASIC1.62□□□□□ -2.15
Hmgb3O54879 Vmn1r75-203ENSMUST00000226855 6548 ntAPPRIS P2 BASIC1.62□□□□□ -2.15
Hmgb3O54879 Zfp735-201ENSMUST00000080407 3746 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
Hmgb3O54879 Rps13-ps8-201ENSMUST00000118906 401 ntBASIC1.62□□□□□ -2.15
Hmgb3O54879 Gm14463-201ENSMUST00000121117 498 ntBASIC1.62□□□□□ -2.15
Hmgb3O54879 Gm22277-201ENSMUST00000157204 277 ntBASIC1.62□□□□□ -2.15
Hmgb3O54879 Gm24075-201ENSMUST00000158175 72 ntBASIC1.62□□□□□ -2.15
Hmgb3O54879 Gm25051-201ENSMUST00000158602 249 ntBASIC1.62□□□□□ -2.15
Hmgb3O54879 Gm24086-201ENSMUST00000175171 98 ntBASIC1.62□□□□□ -2.15
Hmgb3O54879 Gm24304-201ENSMUST00000177635 107 ntBASIC1.62□□□□□ -2.15
Hmgb3O54879 C920009B18Rik-204ENSMUST00000181733 123 ntBASIC1.62□□□□□ -2.15
Hmgb3O54879 Gm26960-201ENSMUST00000182263 412 ntBASIC1.62□□□□□ -2.15
Hmgb3O54879 Mir7016-201ENSMUST00000184308 72 ntBASIC1.62□□□□□ -2.15
Hmgb3O54879 Gm27979-201ENSMUST00000185126 56 ntBASIC1.62□□□□□ -2.15
Hmgb3O54879 AC154296.1-201ENSMUST00000198150 67 ntBASIC1.62□□□□□ -2.15
Hmgb3O54879 Ighv1-68-201ENSMUST00000198789 294 ntBASIC1.62□□□□□ -2.15
Hmgb3O54879 Igkv1-108-201ENSMUST00000198926 298 ntBASIC1.62□□□□□ -2.15
Hmgb3O54879 Bsph1-202ENSMUST00000204715 707 ntAPPRIS ALT2 TSL 1 (best) BASIC1.62□□□□□ -2.15
Hmgb3O54879 Gm17890-201ENSMUST00000221419 757 ntBASIC1.62□□□□□ -2.15
Hmgb3O54879 Mucl1-201ENSMUST00000078842 621 ntAPPRIS ALT2 BASIC1.62□□□□□ -2.15
Hmgb3O54879 AC167192.3-201ENSMUST00000224096 1567 ntBASIC1.62□□□□□ -2.15
Hmgb3O54879 4930595M18Rik-201ENSMUST00000080083 2644 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
Hmgb3O54879 Vmn2r-ps82-201ENSMUST00000174222 1641 ntBASIC1.62□□□□□ -2.15
Hmgb3O54879 Olfr847-202ENSMUST00000216839 2385 ntAPPRIS P1 TSL 3 BASIC1.62□□□□□ -2.15
Hmgb3O54879 Vmn1r178-202ENSMUST00000226450 2880 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
Hmgb3O54879 Zfp273-201ENSMUST00000012725 2277 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
Hmgb3O54879 Olfr1471-204ENSMUST00000217249 1662 ntAPPRIS P1 TSL 5 BASIC1.61□□□□□ -2.15
Hmgb3O54879 Prl8a2-202ENSMUST00000110363 922 ntAPPRIS ALT2 TSL 1 (best) BASIC1.61□□□□□ -2.15
Hmgb3O54879 Gm14566-201ENSMUST00000118915 321 ntBASIC1.61□□□□□ -2.15
Hmgb3O54879 Gm15760-201ENSMUST00000119553 283 ntBASIC1.61□□□□□ -2.15
Hmgb3O54879 Gm22538-201ENSMUST00000158169 299 ntBASIC1.61□□□□□ -2.15
Hmgb3O54879 Gm22159-201ENSMUST00000158412 130 ntBASIC1.61□□□□□ -2.15
Hmgb3O54879 Gm25488-201ENSMUST00000158728 118 ntBASIC1.61□□□□□ -2.15
Hmgb3O54879 Prl3c1-203ENSMUST00000178072 579 ntAPPRIS ALT2 TSL 5 BASIC1.61□□□□□ -2.15
Hmgb3O54879 Gm8897-202ENSMUST00000179679 465 ntAPPRIS ALT2 TSL 5 BASIC1.61□□□□□ -2.15
Hmgb3O54879 Mir6338-201ENSMUST00000183389 109 ntBASIC1.61□□□□□ -2.15
Hmgb3O54879 Gm27265-201ENSMUST00000183559 77 ntBASIC1.61□□□□□ -2.15
Hmgb3O54879 Mir6907-201ENSMUST00000183764 71 ntBASIC1.61□□□□□ -2.15
Hmgb3O54879 Gm27369-201ENSMUST00000185182 71 ntBASIC1.61□□□□□ -2.15
Hmgb3O54879 9830004L10Rik-202ENSMUST00000188074 687 ntTSL 5 BASIC1.61□□□□□ -2.15
Hmgb3O54879 Gm18403-201ENSMUST00000192907 529 ntBASIC1.61□□□□□ -2.15
Hmgb3O54879 Gm43356-201ENSMUST00000196582 609 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
Hmgb3O54879 Gm44012-201ENSMUST00000204154 424 ntTSL 3 BASIC1.61□□□□□ -2.15
Hmgb3O54879 Gm44174-201ENSMUST00000205022 141 ntTSL 2 BASIC1.61□□□□□ -2.15
Hmgb3O54879 Gm38405-203ENSMUST00000208548 400 ntTSL 5 BASIC1.61□□□□□ -2.15
Hmgb3O54879 Gm45868-201ENSMUST00000210247 473 ntTSL 3 BASIC1.61□□□□□ -2.15
Hmgb3O54879 Gm45551-201ENSMUST00000211459 928 ntBASIC1.61□□□□□ -2.15
Hmgb3O54879 Gm18026-201ENSMUST00000222789 727 ntBASIC1.61□□□□□ -2.15
Hmgb3O54879 AC183096.2-201ENSMUST00000228733 457 ntBASIC1.61□□□□□ -2.15
Hmgb3O54879 Pmis2-201ENSMUST00000051495 699 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
Hmgb3O54879 Olfr843-201ENSMUST00000061365 1107 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
Hmgb3O54879 Olfr987-201ENSMUST00000099929 1075 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
Hmgb3O54879 Olfr1029-202ENSMUST00000217244 3743 ntAPPRIS P1 TSL 5 BASIC1.61□□□□□ -2.15
Hmgb3O54879 Olfr629-202ENSMUST00000213906 2548 ntAPPRIS P1 TSL 5 BASIC1.6□□□□□ -2.15
Hmgb3O54879 Gm614-201ENSMUST00000101358 748 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
Hmgb3O54879 Gm25407-201ENSMUST00000104102 134 ntBASIC1.6□□□□□ -2.15
Hmgb3O54879 Mup-ps10-201ENSMUST00000119626 556 ntBASIC1.6□□□□□ -2.15
Hmgb3O54879 Gm12706-201ENSMUST00000121588 698 ntBASIC1.6□□□□□ -2.15
Hmgb3O54879 Gm23463-201ENSMUST00000122468 99 ntBASIC1.6□□□□□ -2.15
Hmgb3O54879 C330018D20Rik-202ENSMUST00000139243 726 ntAPPRIS P1 TSL 3 BASIC1.6□□□□□ -2.15
Hmgb3O54879 Gm24237-201ENSMUST00000157790 132 ntBASIC1.6□□□□□ -2.15
Hmgb3O54879 Gm25373-201ENSMUST00000158156 115 ntBASIC1.6□□□□□ -2.15
Hmgb3O54879 Vmn2r-ps62-201ENSMUST00000174119 616 ntBASIC1.6□□□□□ -2.15
Hmgb3O54879 Mir5101-201ENSMUST00000175181 83 ntBASIC1.6□□□□□ -2.15
Hmgb3O54879 Gm13147-202ENSMUST00000177526 1173 ntBASIC1.6□□□□□ -2.15
Hmgb3O54879 Mir6995-201ENSMUST00000183658 71 ntBASIC1.6□□□□□ -2.15
Hmgb3O54879 Mir7028-201ENSMUST00000185016 64 ntBASIC1.6□□□□□ -2.15
Hmgb3O54879 Gm28627-201ENSMUST00000186141 453 ntBASIC1.6□□□□□ -2.15
Hmgb3O54879 Ighv1-1-201ENSMUST00000194912 291 ntBASIC1.6□□□□□ -2.15
Hmgb3O54879 Gm36445-205ENSMUST00000211729 1100 ntTSL 5 BASIC1.6□□□□□ -2.15
Hmgb3O54879 AC150314.1-201ENSMUST00000214798 238 ntBASIC1.6□□□□□ -2.15
Hmgb3O54879 Olfr1233-204ENSMUST00000216561 1192 ntAPPRIS P1 TSL 5 BASIC1.6□□□□□ -2.15
Hmgb3O54879 CT009764.1-201ENSMUST00000222260 483 ntBASIC1.6□□□□□ -2.15
Hmgb3O54879 AC166830.1-201ENSMUST00000224201 533 ntBASIC1.6□□□□□ -2.15
Hmgb3O54879 AC161758.1-201ENSMUST00000226123 310 ntBASIC1.6□□□□□ -2.15
Hmgb3O54879 Tas2r124-201ENSMUST00000076150 930 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
Retrieved 100 of 76,532 protein–RNA pairs in 118.9 ms