Protein–RNA interactions for Protein: O35350

Capn1, Calpain-1 catalytic subunit, mousemouse

Predictions only

Length 713 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Capn1O35350 Snord116l10-201ENSMUST00000179053 94 ntBASIC3.54□□□□□ -1.84
Capn1O35350 Ear1-202ENSMUST00000179200 519 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Capn1O35350 Gm24153-201ENSMUST00000179280 94 ntBASIC3.54□□□□□ -1.84
Capn1O35350 Gm25597-201ENSMUST00000179388 94 ntBASIC3.54□□□□□ -1.84
Capn1O35350 Snord116l1-201ENSMUST00000179518 94 ntBASIC3.54□□□□□ -1.84
Capn1O35350 Gm25816-201ENSMUST00000179764 94 ntBASIC3.54□□□□□ -1.84
Capn1O35350 Snord116l8-201ENSMUST00000179889 94 ntBASIC3.54□□□□□ -1.84
Capn1O35350 Snord116l7-201ENSMUST00000179895 94 ntBASIC3.54□□□□□ -1.84
Capn1O35350 Snord116l5-201ENSMUST00000179927 94 ntBASIC3.54□□□□□ -1.84
Capn1O35350 Snord116l6-201ENSMUST00000179955 94 ntBASIC3.54□□□□□ -1.84
Capn1O35350 Gm26188-201ENSMUST00000179963 94 ntBASIC3.54□□□□□ -1.84
Capn1O35350 Gm26433-201ENSMUST00000180227 94 ntBASIC3.54□□□□□ -1.84
Capn1O35350 Snord116l11-201ENSMUST00000180312 94 ntBASIC3.54□□□□□ -1.84
Capn1O35350 Gm22128-201ENSMUST00000180346 94 ntBASIC3.54□□□□□ -1.84
Capn1O35350 Gm18291-201ENSMUST00000190791 301 ntBASIC3.54□□□□□ -1.84
Capn1O35350 Gm37603-201ENSMUST00000192368 219 ntBASIC3.54□□□□□ -1.84
Capn1O35350 Ighv1-32-201ENSMUST00000195149 351 ntBASIC3.54□□□□□ -1.84
Capn1O35350 Gm3143-202ENSMUST00000198364 675 ntTSL 2 BASIC3.54□□□□□ -1.84
Capn1O35350 Olfr1481-ps1-201ENSMUST00000207312 134 ntBASIC3.54□□□□□ -1.84
Capn1O35350 Gm8745-201ENSMUST00000207846 782 ntBASIC3.54□□□□□ -1.84
Capn1O35350 Gm45686-201ENSMUST00000210259 460 ntTSL 5 BASIC3.54□□□□□ -1.84
Capn1O35350 AC166343.1-201ENSMUST00000213261 577 ntBASIC3.54□□□□□ -1.84
Capn1O35350 AC166358.10-201ENSMUST00000220556 144 ntBASIC3.54□□□□□ -1.84
Capn1O35350 AC129219.3-201ENSMUST00000223790 196 ntBASIC3.54□□□□□ -1.84
Capn1O35350 Olfr1116-202ENSMUST00000216364 9655 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
Capn1O35350 Gm11228-201ENSMUST00000143796 2013 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
Capn1O35350 Olfr1293-ps-203ENSMUST00000217845 3628 ntAPPRIS P5 TSL 5 BASIC3.54□□□□□ -1.84
Capn1O35350 Olfr1454-203ENSMUST00000214695 4049 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Capn1O35350 Olfr1477-202ENSMUST00000217001 4000 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
Capn1O35350 Zmym2-201ENSMUST00000022511 6974 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Capn1O35350 Olfr1126-202ENSMUST00000213366 1827 ntAPPRIS P1 TSL 3 BASIC3.54□□□□□ -1.84
Capn1O35350 Gm42768-201ENSMUST00000197734 2897 ntBASIC3.53□□□□□ -1.84
Capn1O35350 Olfr194-202ENSMUST00000213228 3668 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
Capn1O35350 B3galt2-201ENSMUST00000038252 9288 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
Capn1O35350 Mgat4c-211ENSMUST00000163753 3862 ntAPPRIS P1 TSL 3 BASIC3.53□□□□□ -1.84
Capn1O35350 Olfr853-202ENSMUST00000213834 3888 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
Capn1O35350 Olfr677-202ENSMUST00000213204 3227 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
Capn1O35350 C87414-206ENSMUST00000162964 2852 ntAPPRIS P2 TSL 1 (best) BASIC3.53□□□□□ -1.84
Capn1O35350 Trbv30-201ENSMUST00000103282 332 ntAPPRIS ALT2 BASIC3.53□□□□□ -1.84
Capn1O35350 Gm25765-201ENSMUST00000104100 132 ntBASIC3.53□□□□□ -1.84
Capn1O35350 Gm24403-201ENSMUST00000104616 130 ntBASIC3.53□□□□□ -1.84
Capn1O35350 Gm14197-201ENSMUST00000117480 1049 ntBASIC3.53□□□□□ -1.84
Capn1O35350 Gm15994-201ENSMUST00000118029 402 ntBASIC3.53□□□□□ -1.84
Capn1O35350 Gm15377-201ENSMUST00000119594 246 ntBASIC3.53□□□□□ -1.84
Capn1O35350 Gm16155-201ENSMUST00000155180 338 ntTSL 3 BASIC3.53□□□□□ -1.84
Capn1O35350 Gm23411-201ENSMUST00000157988 62 ntBASIC3.53□□□□□ -1.84
Capn1O35350 Gm22136-201ENSMUST00000158751 268 ntBASIC3.53□□□□□ -1.84
Capn1O35350 Gm26430-201ENSMUST00000178054 107 ntBASIC3.53□□□□□ -1.84
Capn1O35350 Gm26556-201ENSMUST00000180645 320 ntBASIC3.53□□□□□ -1.84
Capn1O35350 Mir7658-201ENSMUST00000184043 57 ntBASIC3.53□□□□□ -1.84
Capn1O35350 AV026068-203ENSMUST00000185946 668 ntTSL 3 BASIC3.53□□□□□ -1.84
Capn1O35350 Gm28822-201ENSMUST00000191140 778 ntTSL 5 BASIC3.53□□□□□ -1.84
Capn1O35350 Gm44726-201ENSMUST00000203427 217 ntBASIC3.53□□□□□ -1.84
Capn1O35350 Olfr175-ps1-202ENSMUST00000215069 1201 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
Capn1O35350 Gm30624-201ENSMUST00000220039 628 ntTSL 3 BASIC3.53□□□□□ -1.84
Capn1O35350 AC116465.1-201ENSMUST00000220324 235 ntBASIC3.53□□□□□ -1.84
Capn1O35350 AC134860.6-201ENSMUST00000226038 285 ntBASIC3.53□□□□□ -1.84
Capn1O35350 AC118639.1-204ENSMUST00000226401 694 ntBASIC3.53□□□□□ -1.84
Capn1O35350 Ly6a-201ENSMUST00000023248 819 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
Capn1O35350 Gm25578-201ENSMUST00000083406 104 ntBASIC3.53□□□□□ -1.84
Capn1O35350 Olfr1243-202ENSMUST00000144885 3148 ntAPPRIS P1 TSL 3 BASIC3.53□□□□□ -1.84
Capn1O35350 Prlr-202ENSMUST00000124470 9900 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.84
Capn1O35350 Vmn1r185-213ENSMUST00000228676 5199 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
Capn1O35350 Olfr894-202ENSMUST00000212992 3234 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
Capn1O35350 Olfr135-202ENSMUST00000213217 2917 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
Capn1O35350 Olfr1500-204ENSMUST00000215760 2305 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
Capn1O35350 Btbd35f3-201ENSMUST00000140300 1943 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
Capn1O35350 Btla-202ENSMUST00000102802 3251 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
Capn1O35350 Olfr138-203ENSMUST00000173841 1865 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
Capn1O35350 Gm45848-201ENSMUST00000212932 1871 ntTSL 5 BASIC3.52□□□□□ -1.85
Capn1O35350 4930415L06Rik-201ENSMUST00000088146 2617 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
Capn1O35350 Gm14816-201ENSMUST00000117174 294 ntBASIC3.52□□□□□ -1.85
Capn1O35350 Gm14287-201ENSMUST00000121060 117 ntBASIC3.52□□□□□ -1.85
Capn1O35350 Gm11982-201ENSMUST00000121480 314 ntBASIC3.52□□□□□ -1.85
Capn1O35350 Gm12779-201ENSMUST00000121496 143 ntBASIC3.52□□□□□ -1.85
Capn1O35350 Gm22792-201ENSMUST00000157225 133 ntBASIC3.52□□□□□ -1.85
Capn1O35350 Gm22560-201ENSMUST00000157332 120 ntBASIC3.52□□□□□ -1.85
Capn1O35350 Gm23752-201ENSMUST00000157584 115 ntBASIC3.52□□□□□ -1.85
Capn1O35350 Gm23084-201ENSMUST00000157850 114 ntBASIC3.52□□□□□ -1.85
Capn1O35350 Gm23198-201ENSMUST00000158811 91 ntBASIC3.52□□□□□ -1.85
Capn1O35350 Gm25369-201ENSMUST00000158848 132 ntBASIC3.52□□□□□ -1.85
Capn1O35350 Gm27189-201ENSMUST00000184119 190 ntBASIC3.52□□□□□ -1.85
Capn1O35350 Mir6385-201ENSMUST00000184295 105 ntBASIC3.52□□□□□ -1.85
Capn1O35350 Gm29414-201ENSMUST00000185379 448 ntTSL 3 BASIC3.52□□□□□ -1.85
Capn1O35350 Scgb2b29-ps-201ENSMUST00000187539 331 ntBASIC3.52□□□□□ -1.85
Capn1O35350 Gm29350-201ENSMUST00000189141 541 ntBASIC3.52□□□□□ -1.85
Capn1O35350 Gm44343-201ENSMUST00000196702 90 ntBASIC3.52□□□□□ -1.85
Capn1O35350 Gm43529-201ENSMUST00000199178 412 ntBASIC3.52□□□□□ -1.85
Capn1O35350 Gm45162-201ENSMUST00000209013 618 ntBASIC3.52□□□□□ -1.85
Capn1O35350 AC116589.4-201ENSMUST00000222390 216 ntBASIC3.52□□□□□ -1.85
Capn1O35350 AC133517.1-202ENSMUST00000224409 233 ntBASIC3.52□□□□□ -1.85
Capn1O35350 AC166095.1-203ENSMUST00000224591 233 ntBASIC3.52□□□□□ -1.85
Capn1O35350 AC124729.1-201ENSMUST00000225327 976 ntBASIC3.52□□□□□ -1.85
Capn1O35350 AC138718.1-201ENSMUST00000225947 1009 ntBASIC3.52□□□□□ -1.85
Capn1O35350 Olfr1204-201ENSMUST00000078631 930 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
Capn1O35350 Gm25856-201ENSMUST00000082786 75 ntBASIC3.52□□□□□ -1.85
Capn1O35350 Mir323-201ENSMUST00000083683 86 ntBASIC3.52□□□□□ -1.85
Capn1O35350 Olfr513-202ENSMUST00000214670 2029 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
Capn1O35350 Vmn2r-ps83-201ENSMUST00000173787 2368 ntBASIC3.52□□□□□ -1.85
Capn1O35350 Cngb3-201ENSMUST00000102999 4708 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
Retrieved 100 of 76,532 protein–RNA pairs in 91 ms