Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Vmn2r-ps18-201ENSMUST00000177972 380 ntBASIC3.52□□□□□ -1.85
Ebf3O08791 Gm14596-201ENSMUST00000180268 537 ntBASIC3.52□□□□□ -1.85
Ebf3O08791 Gm14595-201ENSMUST00000180335 537 ntBASIC3.52□□□□□ -1.85
Ebf3O08791 Gm27952-201ENSMUST00000184748 105 ntBASIC3.52□□□□□ -1.85
Ebf3O08791 Gm37892-201ENSMUST00000192018 437 ntTSL 3 BASIC3.52□□□□□ -1.85
Ebf3O08791 Gm37715-201ENSMUST00000193206 235 ntBASIC3.52□□□□□ -1.85
Ebf3O08791 Gm37743-201ENSMUST00000194645 376 ntBASIC3.52□□□□□ -1.85
Ebf3O08791 Gm3952-201ENSMUST00000195093 573 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
Ebf3O08791 Gm43043-201ENSMUST00000196579 412 ntBASIC3.52□□□□□ -1.85
Ebf3O08791 Gm42475-201ENSMUST00000201212 295 ntBASIC3.52□□□□□ -1.85
Ebf3O08791 Gm45232-201ENSMUST00000207811 162 ntBASIC3.52□□□□□ -1.85
Ebf3O08791 Gm29818-201ENSMUST00000218070 165 ntBASIC3.52□□□□□ -1.85
Ebf3O08791 Gm2446-201ENSMUST00000220144 772 ntBASIC3.52□□□□□ -1.85
Ebf3O08791 CT010506.2-201ENSMUST00000225618 183 ntBASIC3.52□□□□□ -1.85
Ebf3O08791 CT025689.4-201ENSMUST00000225926 601 ntBASIC3.52□□□□□ -1.85
Ebf3O08791 AC154640.2-201ENSMUST00000226324 472 ntBASIC3.52□□□□□ -1.85
Ebf3O08791 AC117588.2-201ENSMUST00000228340 311 ntBASIC3.52□□□□□ -1.85
Ebf3O08791 Olfr835-201ENSMUST00000059315 936 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
Ebf3O08791 Ear2-201ENSMUST00000074839 719 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
Ebf3O08791 Gm5168-201ENSMUST00000089165 824 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
Ebf3O08791 Gm6020-201ENSMUST00000092094 66 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
Ebf3O08791 CT025577.1-201ENSMUST00000220862 2846 ntBASIC3.52□□□□□ -1.85
Ebf3O08791 Vmn1r89-202ENSMUST00000226717 4120 ntAPPRIS P2 BASIC3.51□□□□□ -1.85
Ebf3O08791 Gm29674-202ENSMUST00000219664 4083 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
Ebf3O08791 n-R5s52-201ENSMUST00000104614 113 ntBASIC3.51□□□□□ -1.85
Ebf3O08791 Gm14669-201ENSMUST00000118841 250 ntBASIC3.51□□□□□ -1.85
Ebf3O08791 Dnaic1-202ENSMUST00000119127 500 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
Ebf3O08791 Gm12858-201ENSMUST00000121913 208 ntBASIC3.51□□□□□ -1.85
Ebf3O08791 Gm24627-201ENSMUST00000122764 138 ntBASIC3.51□□□□□ -1.85
Ebf3O08791 Gm24537-201ENSMUST00000157950 102 ntBASIC3.51□□□□□ -1.85
Ebf3O08791 Gm26024-201ENSMUST00000158657 322 ntBASIC3.51□□□□□ -1.85
Ebf3O08791 Ear-ps12-201ENSMUST00000161720 451 ntBASIC3.51□□□□□ -1.85
Ebf3O08791 Vmn2r-ps55-201ENSMUST00000173834 240 ntBASIC3.51□□□□□ -1.85
Ebf3O08791 Mir5098-201ENSMUST00000175320 82 ntBASIC3.51□□□□□ -1.85
Ebf3O08791 Gm24757-201ENSMUST00000176987 371 ntBASIC3.51□□□□□ -1.85
Ebf3O08791 Gm21094-201ENSMUST00000177842 498 ntTSL 5 BASIC3.51□□□□□ -1.85
Ebf3O08791 Gm20837-201ENSMUST00000178446 498 ntTSL 5 BASIC3.51□□□□□ -1.85
Ebf3O08791 Gm21739-201ENSMUST00000178639 498 ntTSL 5 BASIC3.51□□□□□ -1.85
Ebf3O08791 Gm28891-201ENSMUST00000178751 498 ntTSL 5 BASIC3.51□□□□□ -1.85
Ebf3O08791 Gm25314-201ENSMUST00000178810 79 ntBASIC3.51□□□□□ -1.85
Ebf3O08791 Gm28490-201ENSMUST00000179076 498 ntTSL 5 BASIC3.51□□□□□ -1.85
Ebf3O08791 Gm21861-201ENSMUST00000179480 498 ntTSL 5 BASIC3.51□□□□□ -1.85
Ebf3O08791 Gm21256-201ENSMUST00000179672 498 ntTSL 5 BASIC3.51□□□□□ -1.85
Ebf3O08791 Gm20838-201ENSMUST00000179884 498 ntTSL 5 BASIC3.51□□□□□ -1.85
Ebf3O08791 Gm21679-201ENSMUST00000180373 498 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
Ebf3O08791 Rpl31-ps7-201ENSMUST00000180629 379 ntBASIC3.51□□□□□ -1.85
Ebf3O08791 Mir7062-201ENSMUST00000185038 66 ntBASIC3.51□□□□□ -1.85
Ebf3O08791 Ranbp2-ps10-201ENSMUST00000185097 385 ntBASIC3.51□□□□□ -1.85
Ebf3O08791 1700067G17Rik-201ENSMUST00000186180 603 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
Ebf3O08791 1700029M03Rik-201ENSMUST00000187300 444 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
Ebf3O08791 Gm29023-201ENSMUST00000190543 325 ntTSL 5 BASIC3.51□□□□□ -1.85
Ebf3O08791 2610044O15Rik8-206ENSMUST00000191043 504 ntTSL 2 BASIC3.51□□□□□ -1.85
Ebf3O08791 Gm43932-201ENSMUST00000204499 52 ntBASIC3.51□□□□□ -1.85
Ebf3O08791 4930587E11Rik-202ENSMUST00000204857 807 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
Ebf3O08791 Gm6112-201ENSMUST00000208037 629 ntBASIC3.51□□□□□ -1.85
Ebf3O08791 Gm45814-201ENSMUST00000212646 775 ntBASIC3.51□□□□□ -1.85
Ebf3O08791 Olfr1035-ps1-202ENSMUST00000213364 288 ntTSL 5 BASIC3.51□□□□□ -1.85
Ebf3O08791 AC171203.1-201ENSMUST00000215363 456 ntTSL 5 BASIC3.51□□□□□ -1.85
Ebf3O08791 AC101984.1-201ENSMUST00000219639 402 ntBASIC3.51□□□□□ -1.85
Ebf3O08791 AC239878.1-201ENSMUST00000224212 506 ntBASIC3.51□□□□□ -1.85
Ebf3O08791 AC124729.1-201ENSMUST00000225327 976 ntBASIC3.51□□□□□ -1.85
Ebf3O08791 Snord35b-201ENSMUST00000082833 87 ntBASIC3.51□□□□□ -1.85
Ebf3O08791 Klra3-201ENSMUST00000088017 984 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
Ebf3O08791 Zfp85-202ENSMUST00000144183 2312 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
Ebf3O08791 Olfr1255-202ENSMUST00000214508 2253 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
Ebf3O08791 Gm20619-201ENSMUST00000175814 2008 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
Ebf3O08791 Slc25a36-201ENSMUST00000035024 4043 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
Ebf3O08791 Cp-204ENSMUST00000108328 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
Ebf3O08791 AC155830.1-201ENSMUST00000220050 3836 ntBASIC3.5□□□□□ -1.85
Ebf3O08791 AC154634.4-201ENSMUST00000226077 2665 ntBASIC3.5□□□□□ -1.85
Ebf3O08791 Tfpi-204ENSMUST00000111714 3614 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
Ebf3O08791 Zfp442-202ENSMUST00000185796 1833 ntTSL 5 BASIC3.5□□□□□ -1.85
Ebf3O08791 Trav6-7-dv9-201ENSMUST00000103638 379 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
Ebf3O08791 Gm13672-201ENSMUST00000117554 459 ntBASIC3.5□□□□□ -1.85
Ebf3O08791 Gm14359-201ENSMUST00000118883 424 ntBASIC3.5□□□□□ -1.85
Ebf3O08791 Gm16216-201ENSMUST00000118970 1111 ntBASIC3.5□□□□□ -1.85
Ebf3O08791 Gm13873-201ENSMUST00000119208 427 ntBASIC3.5□□□□□ -1.85
Ebf3O08791 Gm13475-201ENSMUST00000119290 234 ntBASIC3.5□□□□□ -1.85
Ebf3O08791 Gm12495-201ENSMUST00000119750 447 ntBASIC3.5□□□□□ -1.85
Ebf3O08791 Gm25784-201ENSMUST00000122524 81 ntBASIC3.5□□□□□ -1.85
Ebf3O08791 Gm14364-201ENSMUST00000129209 267 ntBASIC3.5□□□□□ -1.85
Ebf3O08791 Gm3848-202ENSMUST00000151564 301 ntTSL 3 BASIC3.5□□□□□ -1.85
Ebf3O08791 Gm22597-201ENSMUST00000157602 80 ntBASIC3.5□□□□□ -1.85
Ebf3O08791 Gm25706-201ENSMUST00000157828 247 ntBASIC3.5□□□□□ -1.85
Ebf3O08791 Gm25365-201ENSMUST00000158852 121 ntBASIC3.5□□□□□ -1.85
Ebf3O08791 Gm27374-201ENSMUST00000183660 81 ntBASIC3.5□□□□□ -1.85
Ebf3O08791 Bsph2-ps-201ENSMUST00000183795 241 ntBASIC3.5□□□□□ -1.85
Ebf3O08791 Gm28030-201ENSMUST00000184987 138 ntBASIC3.5□□□□□ -1.85
Ebf3O08791 Gm32340-201ENSMUST00000192883 259 ntBASIC3.5□□□□□ -1.85
Ebf3O08791 Ighv1-6-201ENSMUST00000193849 293 ntBASIC3.5□□□□□ -1.85
Ebf3O08791 Gm37616-201ENSMUST00000193974 322 ntBASIC3.5□□□□□ -1.85
Ebf3O08791 Ighv1-17-1-201ENSMUST00000194849 351 ntBASIC3.5□□□□□ -1.85
Ebf3O08791 Gm8747-201ENSMUST00000195392 751 ntBASIC3.5□□□□□ -1.85
Ebf3O08791 7330423F06Rik-201ENSMUST00000197499 301 ntBASIC3.5□□□□□ -1.85
Ebf3O08791 Gm42468-201ENSMUST00000200360 703 ntTSL 3 BASIC3.5□□□□□ -1.85
Ebf3O08791 4930595L18Rik-201ENSMUST00000204069 506 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
Ebf3O08791 Gm45590-201ENSMUST00000209715 262 ntBASIC3.5□□□□□ -1.85
Ebf3O08791 4930558N11Rik-204ENSMUST00000211512 516 ntTSL 3 BASIC3.5□□□□□ -1.85
Ebf3O08791 AC153141.1-201ENSMUST00000218636 501 ntBASIC3.5□□□□□ -1.85
Ebf3O08791 Gm39473-201ENSMUST00000223498 522 ntTSL 3 BASIC3.5□□□□□ -1.85
Retrieved 100 of 76,532 protein–RNA pairs in 82.9 ms