Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Gm22444-201ENSMUST00000093693 108 ntBASIC2.33□□□□□ -2.04
Ccdc180J3QNE4 Gm16261-201ENSMUST00000096813 205 ntBASIC2.33□□□□□ -2.04
Ccdc180J3QNE4 Gm22170-201ENSMUST00000097247 107 ntBASIC2.33□□□□□ -2.04
Ccdc180J3QNE4 Gm26099-201ENSMUST00000157248 109 ntBASIC2.32□□□□□ -2.04
Ccdc180J3QNE4 Gm37801-201ENSMUST00000194754 274 ntBASIC2.32□□□□□ -2.04
Ccdc180J3QNE4 Gm45049-201ENSMUST00000207586 591 ntBASIC2.32□□□□□ -2.04
Ccdc180J3QNE4 CT009696.1-201ENSMUST00000215745 256 ntBASIC2.32□□□□□ -2.04
Ccdc180J3QNE4 Gm18188-201ENSMUST00000219386 478 ntBASIC2.32□□□□□ -2.04
Ccdc180J3QNE4 AC126275.1-201ENSMUST00000224881 446 ntBASIC2.32□□□□□ -2.04
Ccdc180J3QNE4 AC115047.2-201ENSMUST00000214421 1848 ntBASIC2.32□□□□□ -2.04
Ccdc180J3QNE4 Gm27921-201ENSMUST00000183968 108 ntBASIC2.31□□□□□ -2.04
Ccdc180J3QNE4 Gm44476-201ENSMUST00000196225 91 ntBASIC2.31□□□□□ -2.04
Ccdc180J3QNE4 Gm43510-201ENSMUST00000197922 353 ntBASIC2.31□□□□□ -2.04
Ccdc180J3QNE4 Gm23347-201ENSMUST00000083823 82 ntBASIC2.31□□□□□ -2.04
Ccdc180J3QNE4 Gm12372-201ENSMUST00000121654 768 ntBASIC2.31□□□□□ -2.04
Ccdc180J3QNE4 Gm37417-201ENSMUST00000195257 454 ntBASIC2.31□□□□□ -2.04
Ccdc180J3QNE4 Gm43841-201ENSMUST00000199491 586 ntBASIC2.31□□□□□ -2.04
Ccdc180J3QNE4 AC134468.1-201ENSMUST00000220869 299 ntTSL 5 BASIC2.31□□□□□ -2.04
Ccdc180J3QNE4 Defb7-201ENSMUST00000047851 306 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
Ccdc180J3QNE4 Gm4224-201ENSMUST00000211557 1594 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
Ccdc180J3QNE4 Gm12550-201ENSMUST00000118478 329 ntBASIC2.3□□□□□ -2.04
Ccdc180J3QNE4 Gm14366-201ENSMUST00000121970 730 ntBASIC2.3□□□□□ -2.04
Ccdc180J3QNE4 Gm23718-201ENSMUST00000157350 307 ntBASIC2.3□□□□□ -2.04
Ccdc180J3QNE4 AC121942.2-201ENSMUST00000223824 600 ntBASIC2.3□□□□□ -2.04
Ccdc180J3QNE4 Rny1-201ENSMUST00000083767 112 ntBASIC2.3□□□□□ -2.04
Ccdc180J3QNE4 Gm3055-201ENSMUST00000105316 720 ntTSL 5 BASIC2.29□□□□□ -2.04
Ccdc180J3QNE4 Olfr848-ps1-201ENSMUST00000212241 930 ntBASIC2.29□□□□□ -2.04
Ccdc180J3QNE4 AC133083.2-201ENSMUST00000222826 272 ntTSL 5 BASIC2.29□□□□□ -2.04
Ccdc180J3QNE4 Olfr1487-204ENSMUST00000216688 2038 ntTSL 5 BASIC2.29□□□□□ -2.04
Ccdc180J3QNE4 Gm14770-201ENSMUST00000122197 312 ntBASIC2.28□□□□□ -2.04
Ccdc180J3QNE4 C920009B18Rik-204ENSMUST00000181733 123 ntBASIC2.28□□□□□ -2.04
Ccdc180J3QNE4 A930027P06Rik-201ENSMUST00000221298 2975 ntBASIC2.28□□□□□ -2.04
Ccdc180J3QNE4 Olfr141-201ENSMUST00000216117 2935 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
Ccdc180J3QNE4 Snord71-201ENSMUST00000104361 85 ntBASIC2.28□□□□□ -2.05
Ccdc180J3QNE4 Gm12309-201ENSMUST00000119889 182 ntBASIC2.28□□□□□ -2.05
Ccdc180J3QNE4 Gm11556-201ENSMUST00000120751 288 ntBASIC2.28□□□□□ -2.05
Ccdc180J3QNE4 Gm22345-201ENSMUST00000122644 107 ntBASIC2.28□□□□□ -2.05
Ccdc180J3QNE4 Gm6651-201ENSMUST00000189471 271 ntBASIC2.28□□□□□ -2.05
Ccdc180J3QNE4 4930402F11Rik-203ENSMUST00000208289 606 ntTSL 3 BASIC2.28□□□□□ -2.05
Ccdc180J3QNE4 Gm45696-201ENSMUST00000212088 985 ntBASIC2.28□□□□□ -2.05
Ccdc180J3QNE4 AC142191.1-201ENSMUST00000219217 699 ntTSL 5 BASIC2.28□□□□□ -2.05
Ccdc180J3QNE4 AC124456.1-201ENSMUST00000217391 2597 ntBASIC2.27□□□□□ -2.05
Ccdc180J3QNE4 Gm22469-201ENSMUST00000104118 133 ntBASIC2.27□□□□□ -2.05
Ccdc180J3QNE4 Gm14215-201ENSMUST00000120578 221 ntBASIC2.27□□□□□ -2.05
Ccdc180J3QNE4 Gm45754-201ENSMUST00000212380 279 ntBASIC2.27□□□□□ -2.05
Ccdc180J3QNE4 Gm19563-201ENSMUST00000222031 270 ntBASIC2.27□□□□□ -2.05
Ccdc180J3QNE4 Gm23677-201ENSMUST00000083156 104 ntBASIC2.27□□□□□ -2.05
Ccdc180J3QNE4 Olfr1166-202ENSMUST00000217575 2004 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
Ccdc180J3QNE4 Vmn1r2-201ENSMUST00000105160 921 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
Ccdc180J3QNE4 Trav7-6-202ENSMUST00000184687 275 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
Ccdc180J3QNE4 Gm6135-201ENSMUST00000198726 372 ntTSL 2 BASIC2.26□□□□□ -2.05
Ccdc180J3QNE4 Gm36520-201ENSMUST00000200449 400 ntTSL 3 BASIC2.26□□□□□ -2.05
Ccdc180J3QNE4 Gm43578-201ENSMUST00000201250 459 ntBASIC2.26□□□□□ -2.05
Ccdc180J3QNE4 Gm20557-201ENSMUST00000192871 2794 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
Ccdc180J3QNE4 A630081D01Rik-201ENSMUST00000195842 1833 ntBASIC2.25□□□□□ -2.05
Ccdc180J3QNE4 Gm649-201ENSMUST00000117284 1054 ntBASIC2.25□□□□□ -2.05
Ccdc180J3QNE4 Olfr475-ps1-201ENSMUST00000117982 932 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
Ccdc180J3QNE4 Gm45868-201ENSMUST00000210247 473 ntTSL 3 BASIC2.25□□□□□ -2.05
Ccdc180J3QNE4 AC171204.1-201ENSMUST00000215867 975 ntTSL 5 BASIC2.25□□□□□ -2.05
Ccdc180J3QNE4 Gm3442-201ENSMUST00000216808 710 ntBASIC2.25□□□□□ -2.05
Ccdc180J3QNE4 Olfr1253-204ENSMUST00000215988 6332 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
Ccdc180J3QNE4 Olfr1151-202ENSMUST00000217376 2866 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
Ccdc180J3QNE4 Gm15161-201ENSMUST00000117340 387 ntBASIC2.25□□□□□ -2.05
Ccdc180J3QNE4 Gm12006-201ENSMUST00000120786 403 ntBASIC2.25□□□□□ -2.05
Ccdc180J3QNE4 Igkv13-61-1-201ENSMUST00000198255 296 ntBASIC2.25□□□□□ -2.05
Ccdc180J3QNE4 Gm5317-201ENSMUST00000204445 847 ntBASIC2.25□□□□□ -2.05
Ccdc180J3QNE4 Gm44962-201ENSMUST00000206460 279 ntBASIC2.25□□□□□ -2.05
Ccdc180J3QNE4 Gm7065-201ENSMUST00000222150 474 ntBASIC2.25□□□□□ -2.05
Ccdc180J3QNE4 Vmn1r29-204ENSMUST00000228038 4520 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
Ccdc180J3QNE4 Homer1-205ENSMUST00000109492 1533 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
Ccdc180J3QNE4 Gm25992-201ENSMUST00000102437 109 ntBASIC2.24□□□□□ -2.05
Ccdc180J3QNE4 Gm13457-201ENSMUST00000117885 267 ntBASIC2.24□□□□□ -2.05
Ccdc180J3QNE4 Gm28151-201ENSMUST00000189404 951 ntBASIC2.24□□□□□ -2.05
Ccdc180J3QNE4 Olfr6-204ENSMUST00000219365 951 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
Ccdc180J3QNE4 Gm42968-201ENSMUST00000198578 1372 ntBASIC2.24□□□□□ -2.05
Ccdc180J3QNE4 Gm12272-201ENSMUST00000138136 333 ntTSL 5 BASIC2.23□□□□□ -2.05
Ccdc180J3QNE4 Vmn1r75-205ENSMUST00000228268 4376 ntAPPRIS ALT2 BASIC2.22□□□□□ -2.05
Ccdc180J3QNE4 Gm23893-201ENSMUST00000158106 134 ntBASIC2.22□□□□□ -2.05
Ccdc180J3QNE4 Gm5277-201ENSMUST00000164923 556 ntBASIC2.22□□□□□ -2.05
Ccdc180J3QNE4 Obox4-ps24-201ENSMUST00000197686 540 ntBASIC2.22□□□□□ -2.05
Ccdc180J3QNE4 Gm9068-201ENSMUST00000217393 455 ntBASIC2.22□□□□□ -2.05
Ccdc180J3QNE4 AC133156.1-202ENSMUST00000227284 363 ntBASIC2.22□□□□□ -2.05
Ccdc180J3QNE4 Olfr385-202ENSMUST00000215689 1671 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
Ccdc180J3QNE4 Gm24551-201ENSMUST00000158645 92 ntBASIC2.22□□□□□ -2.05
Ccdc180J3QNE4 Olfr786-201ENSMUST00000076508 939 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
Ccdc180J3QNE4 Scgb2b16-ps-201ENSMUST00000188720 333 ntBASIC2.21□□□□□ -2.06
Ccdc180J3QNE4 Scgb2b14-ps-201ENSMUST00000189424 336 ntBASIC2.21□□□□□ -2.06
Ccdc180J3QNE4 Gm25416-201ENSMUST00000104221 107 ntBASIC2.2□□□□□ -2.06
Ccdc180J3QNE4 Gm25625-201ENSMUST00000157221 96 ntBASIC2.2□□□□□ -2.06
Ccdc180J3QNE4 Gm25606-201ENSMUST00000158363 95 ntBASIC2.2□□□□□ -2.06
Ccdc180J3QNE4 Gm7094-201ENSMUST00000178379 366 ntBASIC2.2□□□□□ -2.06
Ccdc180J3QNE4 AC133498.1-203ENSMUST00000221213 668 ntTSL 3 BASIC2.2□□□□□ -2.06
Ccdc180J3QNE4 Mir10b-201ENSMUST00000083566 68 ntBASIC2.2□□□□□ -2.06
Ccdc180J3QNE4 Gm16363-201ENSMUST00000132460 877 ntBASIC2.19□□□□□ -2.06
Ccdc180J3QNE4 Vmn1r-ps27-201ENSMUST00000174619 985 ntBASIC2.19□□□□□ -2.06
Ccdc180J3QNE4 Gm29347-201ENSMUST00000186695 449 ntTSL 3 BASIC2.19□□□□□ -2.06
Ccdc180J3QNE4 Gm43675-201ENSMUST00000199468 1184 ntBASIC2.19□□□□□ -2.06
Ccdc180J3QNE4 Gm44548-201ENSMUST00000208929 192 ntBASIC2.19□□□□□ -2.06
Ccdc180J3QNE4 Olfr138-202ENSMUST00000172843 1769 ntAPPRIS P1 TSL 2 BASIC2.19□□□□□ -2.06
Ccdc180J3QNE4 Gm44666-201ENSMUST00000208544 391 ntBASIC2.18□□□□□ -2.06
Retrieved 100 of 76,532 protein–RNA pairs in 81.4 ms