Protein–RNA interactions for Protein: G3X8Y1

Trim55, MCG19772, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55G3X8Y1 Postn-203ENSMUST00000107985 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
Trim55G3X8Y1 Vmn1r82-201ENSMUST00000072801 4784 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Trim55G3X8Y1 Vmn2r116-201ENSMUST00000164856 2571 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Trim55G3X8Y1 2210408I21Rik-201ENSMUST00000168779 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Trim55G3X8Y1 Olfr986-204ENSMUST00000218134 3487 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Trim55G3X8Y1 Gm45159-201ENSMUST00000208630 25241 ntTSL 5 BASIC4.22□□□□□ -1.73
Trim55G3X8Y1 Senp8-203ENSMUST00000177963 3792 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
Trim55G3X8Y1 Olfr107-202ENSMUST00000215894 2512 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Trim55G3X8Y1 Trappc1-203ENSMUST00000102602 751 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
Trim55G3X8Y1 Gm24469-201ENSMUST00000104487 131 ntBASIC4.22□□□□□ -1.73
Trim55G3X8Y1 Gm15377-201ENSMUST00000119594 246 ntBASIC4.22□□□□□ -1.73
Trim55G3X8Y1 Gm13717-201ENSMUST00000119868 365 ntBASIC4.22□□□□□ -1.73
Trim55G3X8Y1 Rpl23a-ps13-201ENSMUST00000120350 441 ntBASIC4.22□□□□□ -1.73
Trim55G3X8Y1 Gm6265-201ENSMUST00000149263 231 ntBASIC4.22□□□□□ -1.73
Trim55G3X8Y1 Gm27926-201ENSMUST00000157180 66 ntBASIC4.22□□□□□ -1.73
Trim55G3X8Y1 Gm26098-201ENSMUST00000157247 288 ntBASIC4.22□□□□□ -1.73
Trim55G3X8Y1 Gm26414-201ENSMUST00000157674 269 ntBASIC4.22□□□□□ -1.73
Trim55G3X8Y1 Gm17956-201ENSMUST00000199931 838 ntBASIC4.22□□□□□ -1.73
Trim55G3X8Y1 Gm32308-201ENSMUST00000203053 280 ntBASIC4.22□□□□□ -1.73
Trim55G3X8Y1 Gm45815-201ENSMUST00000220241 146 ntBASIC4.22□□□□□ -1.73
Trim55G3X8Y1 Rpl21-ps4-201ENSMUST00000080237 438 ntBASIC4.22□□□□□ -1.73
Trim55G3X8Y1 0610010F05Rik-201ENSMUST00000043356 4392 ntAPPRIS P2 TSL 5 BASIC4.22□□□□□ -1.73
Trim55G3X8Y1 Vmn2r82-201ENSMUST00000170596 3045 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Trim55G3X8Y1 Olfr1258-203ENSMUST00000213720 7098 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Trim55G3X8Y1 Olfr1116-202ENSMUST00000216364 9655 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
Trim55G3X8Y1 Vmn1r195-202ENSMUST00000228711 3056 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Trim55G3X8Y1 Hfm1-202ENSMUST00000117588 4870 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Trim55G3X8Y1 Gm11782-201ENSMUST00000131675 2804 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Trim55G3X8Y1 Olfr1028-201ENSMUST00000080698 3474 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Trim55G3X8Y1 Olfr898-202ENSMUST00000216304 3979 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
Trim55G3X8Y1 Gm24124-201ENSMUST00000104103 132 ntBASIC4.21□□□□□ -1.74
Trim55G3X8Y1 Gm13343-201ENSMUST00000116474 105 ntBASIC4.21□□□□□ -1.74
Trim55G3X8Y1 Gm12902-201ENSMUST00000118389 322 ntBASIC4.21□□□□□ -1.74
Trim55G3X8Y1 Gm12272-201ENSMUST00000138136 333 ntTSL 5 BASIC4.21□□□□□ -1.74
Trim55G3X8Y1 Gm13266-201ENSMUST00000141869 579 ntTSL 2 BASIC4.21□□□□□ -1.74
Trim55G3X8Y1 Mir1947-201ENSMUST00000158235 85 ntBASIC4.21□□□□□ -1.74
Trim55G3X8Y1 Gm17218-201ENSMUST00000165911 410 ntTSL 3 BASIC4.21□□□□□ -1.74
Trim55G3X8Y1 Vmn1r-ps40-201ENSMUST00000172862 343 ntBASIC4.21□□□□□ -1.74
Trim55G3X8Y1 Gm26962-201ENSMUST00000182545 265 ntTSL 3 BASIC4.21□□□□□ -1.74
Trim55G3X8Y1 Gm27535-201ENSMUST00000183814 157 ntBASIC4.21□□□□□ -1.74
Trim55G3X8Y1 Gm29512-201ENSMUST00000185544 315 ntBASIC4.21□□□□□ -1.74
Trim55G3X8Y1 Gm28110-201ENSMUST00000185782 315 ntBASIC4.21□□□□□ -1.74
Trim55G3X8Y1 Gm28838-201ENSMUST00000186338 315 ntBASIC4.21□□□□□ -1.74
Trim55G3X8Y1 Gm29057-201ENSMUST00000186468 315 ntBASIC4.21□□□□□ -1.74
Trim55G3X8Y1 Gm29661-201ENSMUST00000186781 315 ntBASIC4.21□□□□□ -1.74
Trim55G3X8Y1 Gm28737-201ENSMUST00000186808 315 ntBASIC4.21□□□□□ -1.74
Trim55G3X8Y1 Gm29118-201ENSMUST00000186908 315 ntBASIC4.21□□□□□ -1.74
Trim55G3X8Y1 Gm28433-201ENSMUST00000187085 315 ntBASIC4.21□□□□□ -1.74
Trim55G3X8Y1 Gm29635-201ENSMUST00000187221 315 ntBASIC4.21□□□□□ -1.74
Trim55G3X8Y1 Gm28759-201ENSMUST00000187621 315 ntBASIC4.21□□□□□ -1.74
Trim55G3X8Y1 Gm28831-201ENSMUST00000187739 315 ntBASIC4.21□□□□□ -1.74
Trim55G3X8Y1 Gm28200-201ENSMUST00000187778 315 ntBASIC4.21□□□□□ -1.74
Trim55G3X8Y1 Gm29026-201ENSMUST00000187787 315 ntBASIC4.21□□□□□ -1.74
Trim55G3X8Y1 Gm28752-201ENSMUST00000188340 315 ntBASIC4.21□□□□□ -1.74
Trim55G3X8Y1 Gm28797-201ENSMUST00000188543 315 ntBASIC4.21□□□□□ -1.74
Trim55G3X8Y1 Gm28855-201ENSMUST00000188680 315 ntBASIC4.21□□□□□ -1.74
Trim55G3X8Y1 Gm29378-201ENSMUST00000188723 315 ntBASIC4.21□□□□□ -1.74
Trim55G3X8Y1 Gm28569-201ENSMUST00000188748 315 ntBASIC4.21□□□□□ -1.74
Trim55G3X8Y1 Gm28120-201ENSMUST00000188812 315 ntBASIC4.21□□□□□ -1.74
Trim55G3X8Y1 Gm28369-201ENSMUST00000188993 315 ntBASIC4.21□□□□□ -1.74
Trim55G3X8Y1 Gm29037-201ENSMUST00000189092 313 ntBASIC4.21□□□□□ -1.74
Trim55G3X8Y1 Gm28909-201ENSMUST00000189406 315 ntBASIC4.21□□□□□ -1.74
Trim55G3X8Y1 Gm28705-201ENSMUST00000189548 315 ntBASIC4.21□□□□□ -1.74
Trim55G3X8Y1 Gm28861-201ENSMUST00000189681 315 ntBASIC4.21□□□□□ -1.74
Trim55G3X8Y1 Gm29180-201ENSMUST00000190003 315 ntBASIC4.21□□□□□ -1.74
Trim55G3X8Y1 Gm28939-201ENSMUST00000190351 315 ntBASIC4.21□□□□□ -1.74
Trim55G3X8Y1 Gm28223-201ENSMUST00000190469 315 ntBASIC4.21□□□□□ -1.74
Trim55G3X8Y1 Gm29575-201ENSMUST00000190597 315 ntBASIC4.21□□□□□ -1.74
Trim55G3X8Y1 Gm29092-201ENSMUST00000190768 315 ntBASIC4.21□□□□□ -1.74
Trim55G3X8Y1 Gm29469-201ENSMUST00000191448 315 ntBASIC4.21□□□□□ -1.74
Trim55G3X8Y1 Gm43739-201ENSMUST00000198294 307 ntBASIC4.21□□□□□ -1.74
Trim55G3X8Y1 Gm6135-201ENSMUST00000198726 372 ntTSL 2 BASIC4.21□□□□□ -1.74
Trim55G3X8Y1 Gm43529-201ENSMUST00000199178 412 ntBASIC4.21□□□□□ -1.74
Trim55G3X8Y1 Gm18258-201ENSMUST00000210413 542 ntBASIC4.21□□□□□ -1.74
Trim55G3X8Y1 Olfr337-ps1-202ENSMUST00000213375 526 ntBASIC4.21□□□□□ -1.74
Trim55G3X8Y1 AC109180.1-201ENSMUST00000218676 398 ntBASIC4.21□□□□□ -1.74
Trim55G3X8Y1 Gm25257-201ENSMUST00000083907 110 ntBASIC4.21□□□□□ -1.74
Trim55G3X8Y1 Defb41-201ENSMUST00000088463 467 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Trim55G3X8Y1 2610300M13Rik-202ENSMUST00000203716 1787 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Trim55G3X8Y1 Vmn2r-ps69-201ENSMUST00000173382 2565 ntBASIC4.21□□□□□ -1.74
Trim55G3X8Y1 Olfr1313-202ENSMUST00000213577 2588 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Trim55G3X8Y1 Tex47-203ENSMUST00000160634 2881 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Trim55G3X8Y1 Vmn1r80-209ENSMUST00000228578 11005 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Trim55G3X8Y1 Rian-201ENSMUST00000180876 8089 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Trim55G3X8Y1 Pik3ca-201ENSMUST00000029201 8917 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Trim55G3X8Y1 Gm2042-207ENSMUST00000181326 2440 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
Trim55G3X8Y1 Gm36960-201ENSMUST00000195491 2035 ntBASIC4.21□□□□□ -1.74
Trim55G3X8Y1 Olfr726-203ENSMUST00000213345 1728 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.74
Trim55G3X8Y1 Gm44164-201ENSMUST00000203605 2561 ntBASIC4.2□□□□□ -1.74
Trim55G3X8Y1 Gm45540-201ENSMUST00000209271 3606 ntBASIC4.2□□□□□ -1.74
Trim55G3X8Y1 Strbp-201ENSMUST00000028279 16348 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Trim55G3X8Y1 Gm22657-201ENSMUST00000104197 132 ntBASIC4.2□□□□□ -1.74
Trim55G3X8Y1 Gm11939-201ENSMUST00000104931 300 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Trim55G3X8Y1 Gm13672-201ENSMUST00000117554 459 ntBASIC4.2□□□□□ -1.74
Trim55G3X8Y1 Gm16242-201ENSMUST00000117741 334 ntBASIC4.2□□□□□ -1.74
Trim55G3X8Y1 Psmb7-ps2-201ENSMUST00000118546 820 ntBASIC4.2□□□□□ -1.74
Trim55G3X8Y1 Gm14119-201ENSMUST00000119511 235 ntBASIC4.2□□□□□ -1.74
Trim55G3X8Y1 Tpt1-ps3-201ENSMUST00000121046 519 ntBASIC4.2□□□□□ -1.74
Trim55G3X8Y1 Gm14768-201ENSMUST00000122126 678 ntBASIC4.2□□□□□ -1.74
Trim55G3X8Y1 Gm15338-201ENSMUST00000151884 552 ntTSL 3 BASIC4.2□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 88.9 ms