Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Lrrc19-201ENSMUST00000053419 2780 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
Shank1D3YZU1 Vmn1r185-202ENSMUST00000226694 5656 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
Shank1D3YZU1 Vmn1r185-208ENSMUST00000228004 5682 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
Shank1D3YZU1 Vmn2r42-205ENSMUST00000146278 3086 ntAPPRIS ALT2 TSL 5 BASIC2.8□□□□□ -1.96
Shank1D3YZU1 Mir450-2-201ENSMUST00000102444 69 ntBASIC2.8□□□□□ -1.96
Shank1D3YZU1 Igkv9-124-201ENSMUST00000103312 287 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
Shank1D3YZU1 Ighv15-2-201ENSMUST00000103497 351 ntAPPRIS ALT2 BASIC2.8□□□□□ -1.96
Shank1D3YZU1 Gm16216-201ENSMUST00000118970 1111 ntBASIC2.8□□□□□ -1.96
Shank1D3YZU1 Gm15537-201ENSMUST00000126677 485 ntTSL 2 BASIC2.8□□□□□ -1.96
Shank1D3YZU1 Gm12023-201ENSMUST00000145182 520 ntTSL 5 BASIC2.8□□□□□ -1.96
Shank1D3YZU1 Gm21746-201ENSMUST00000177612 543 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
Shank1D3YZU1 Vmn2r-ps19-201ENSMUST00000179720 269 ntBASIC2.8□□□□□ -1.96
Shank1D3YZU1 Gm21171-201ENSMUST00000180048 673 ntBASIC2.8□□□□□ -1.96
Shank1D3YZU1 Gm27477-201ENSMUST00000184649 143 ntBASIC2.8□□□□□ -1.96
Shank1D3YZU1 Gm29134-201ENSMUST00000186579 126 ntBASIC2.8□□□□□ -1.96
Shank1D3YZU1 Gm28241-201ENSMUST00000190916 235 ntBASIC2.8□□□□□ -1.96
Shank1D3YZU1 Gm18964-201ENSMUST00000193013 563 ntBASIC2.8□□□□□ -1.96
Shank1D3YZU1 Gm8747-201ENSMUST00000195392 751 ntBASIC2.8□□□□□ -1.96
Shank1D3YZU1 Gm43500-201ENSMUST00000201067 312 ntTSL 5 BASIC2.8□□□□□ -1.96
Shank1D3YZU1 4930431P19Rik-201ENSMUST00000207570 451 ntBASIC2.8□□□□□ -1.96
Shank1D3YZU1 Gm36243-201ENSMUST00000211546 610 ntTSL 3 BASIC2.8□□□□□ -1.96
Shank1D3YZU1 Gm31849-201ENSMUST00000220306 375 ntBASIC2.8□□□□□ -1.96
Shank1D3YZU1 AC116589.7-201ENSMUST00000221061 239 ntBASIC2.8□□□□□ -1.96
Shank1D3YZU1 AC164117.1-201ENSMUST00000221726 239 ntBASIC2.8□□□□□ -1.96
Shank1D3YZU1 AC162934.1-201ENSMUST00000222880 309 ntBASIC2.8□□□□□ -1.96
Shank1D3YZU1 CT009713.9-201ENSMUST00000223604 389 ntBASIC2.8□□□□□ -1.96
Shank1D3YZU1 Olfr689-201ENSMUST00000098153 1076 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
Shank1D3YZU1 Skint4-202ENSMUST00000106564 3997 ntAPPRIS ALT2 TSL 1 (best) BASIC2.8□□□□□ -1.96
Shank1D3YZU1 Skint4-204ENSMUST00000106566 3997 ntAPPRIS P3 TSL 1 (best) BASIC2.8□□□□□ -1.96
Shank1D3YZU1 Gm18609-201ENSMUST00000203370 3601 ntBASIC2.8□□□□□ -1.96
Shank1D3YZU1 AC126033.1-201ENSMUST00000227628 6773 ntBASIC2.8□□□□□ -1.96
Shank1D3YZU1 Olfr1051-202ENSMUST00000216432 2807 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
Shank1D3YZU1 Traj31-201ENSMUST00000103710 57 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
Shank1D3YZU1 Gm12386-201ENSMUST00000117380 688 ntBASIC2.8□□□□□ -1.96
Shank1D3YZU1 Gm13581-201ENSMUST00000120675 278 ntBASIC2.8□□□□□ -1.96
Shank1D3YZU1 Vmn1r-ps116-201ENSMUST00000121544 292 ntBASIC2.8□□□□□ -1.96
Shank1D3YZU1 n-R5s32-201ENSMUST00000122495 103 ntBASIC2.8□□□□□ -1.96
Shank1D3YZU1 Gm4916-201ENSMUST00000126139 642 ntBASIC2.8□□□□□ -1.96
Shank1D3YZU1 Gm24240-201ENSMUST00000157785 135 ntBASIC2.8□□□□□ -1.96
Shank1D3YZU1 Gm22434-201ENSMUST00000158549 122 ntBASIC2.8□□□□□ -1.96
Shank1D3YZU1 Mrgprb12-ps-201ENSMUST00000186150 949 ntBASIC2.8□□□□□ -1.96
Shank1D3YZU1 Gm28598-201ENSMUST00000186490 615 ntBASIC2.8□□□□□ -1.96
Shank1D3YZU1 Gm29268-201ENSMUST00000188669 615 ntBASIC2.8□□□□□ -1.96
Shank1D3YZU1 Gm28978-201ENSMUST00000191120 615 ntBASIC2.8□□□□□ -1.96
Shank1D3YZU1 Gm37172-201ENSMUST00000191926 615 ntBASIC2.8□□□□□ -1.96
Shank1D3YZU1 Gm38329-201ENSMUST00000193473 427 ntBASIC2.8□□□□□ -1.96
Shank1D3YZU1 A930014E01Rik-201ENSMUST00000194572 330 ntBASIC2.8□□□□□ -1.96
Shank1D3YZU1 Gm43652-201ENSMUST00000196219 675 ntBASIC2.8□□□□□ -1.96
Shank1D3YZU1 Gm44349-201ENSMUST00000197048 123 ntBASIC2.8□□□□□ -1.96
Shank1D3YZU1 Igkv1-115-201ENSMUST00000198714 302 ntBASIC2.8□□□□□ -1.96
Shank1D3YZU1 Gm29926-201ENSMUST00000201443 660 ntTSL 3 BASIC2.8□□□□□ -1.96
Shank1D3YZU1 Gm44011-201ENSMUST00000203336 394 ntBASIC2.8□□□□□ -1.96
Shank1D3YZU1 Gm18252-201ENSMUST00000214814 527 ntTSL 5 BASIC2.8□□□□□ -1.96
Shank1D3YZU1 Rpl31-ps2-201ENSMUST00000223231 343 ntBASIC2.8□□□□□ -1.96
Shank1D3YZU1 AC133498.1-206ENSMUST00000223254 385 ntTSL 5 BASIC2.8□□□□□ -1.96
Shank1D3YZU1 CT025689.4-201ENSMUST00000225926 601 ntBASIC2.8□□□□□ -1.96
Shank1D3YZU1 AC101945.3-201ENSMUST00000226568 153 ntBASIC2.8□□□□□ -1.96
Shank1D3YZU1 AC131029.2-202ENSMUST00000228430 496 ntBASIC2.8□□□□□ -1.96
Shank1D3YZU1 Olfr835-201ENSMUST00000059315 936 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
Shank1D3YZU1 Ear2-201ENSMUST00000074839 719 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
Shank1D3YZU1 Gm24950-201ENSMUST00000082768 191 ntBASIC2.8□□□□□ -1.96
Shank1D3YZU1 Gm23971-201ENSMUST00000083317 191 ntBASIC2.8□□□□□ -1.96
Shank1D3YZU1 Gm23849-201ENSMUST00000083833 191 ntBASIC2.8□□□□□ -1.96
Shank1D3YZU1 Gm26316-201ENSMUST00000083886 191 ntBASIC2.8□□□□□ -1.96
Shank1D3YZU1 Rnu2-10-201ENSMUST00000084010 191 ntBASIC2.8□□□□□ -1.96
Shank1D3YZU1 Zfp970-202ENSMUST00000108952 1569 ntAPPRIS P1 TSL 2 BASIC2.8□□□□□ -1.96
Shank1D3YZU1 Trav14d-2-201ENSMUST00000103597 276 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
Shank1D3YZU1 Trav14n-2-201ENSMUST00000103623 276 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
Shank1D3YZU1 Gm22656-201ENSMUST00000104199 171 ntBASIC2.79□□□□□ -1.96
Shank1D3YZU1 Gm14880-201ENSMUST00000117581 292 ntBASIC2.79□□□□□ -1.96
Shank1D3YZU1 Gm12368-201ENSMUST00000122251 434 ntBASIC2.79□□□□□ -1.96
Shank1D3YZU1 Gm14804-201ENSMUST00000122322 508 ntBASIC2.79□□□□□ -1.96
Shank1D3YZU1 Gm14364-201ENSMUST00000129209 267 ntBASIC2.79□□□□□ -1.96
Shank1D3YZU1 Etaa1os-201ENSMUST00000140161 550 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
Shank1D3YZU1 Gm13748-201ENSMUST00000149820 378 ntTSL 2 BASIC2.79□□□□□ -1.96
Shank1D3YZU1 Gm20543-201ENSMUST00000174200 726 ntBASIC2.79□□□□□ -1.96
Shank1D3YZU1 Snord92-201ENSMUST00000175548 85 ntBASIC2.79□□□□□ -1.96
Shank1D3YZU1 Gm20651-201ENSMUST00000177219 329 ntBASIC2.79□□□□□ -1.96
Shank1D3YZU1 Gm24100-201ENSMUST00000178592 79 ntBASIC2.79□□□□□ -1.96
Shank1D3YZU1 Gm24137-201ENSMUST00000180055 79 ntBASIC2.79□□□□□ -1.96
Shank1D3YZU1 Gm22391-201ENSMUST00000180356 79 ntBASIC2.79□□□□□ -1.96
Shank1D3YZU1 Trav14-2-202ENSMUST00000184874 276 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
Shank1D3YZU1 Gm7195-201ENSMUST00000190869 1707 ntBASIC2.79□□□□□ -1.96
Shank1D3YZU1 Gm44041-201ENSMUST00000203678 396 ntBASIC2.79□□□□□ -1.96
Shank1D3YZU1 Olfr822-201ENSMUST00000080460 942 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
Shank1D3YZU1 Smcp-201ENSMUST00000098888 861 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
Shank1D3YZU1 Cdk13-205ENSMUST00000222800 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC2.79□□□□□ -1.96
Shank1D3YZU1 Vmn1r178-203ENSMUST00000226489 2644 ntBASIC2.79□□□□□ -1.96
Shank1D3YZU1 Olfr1111-202ENSMUST00000214492 1616 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
Shank1D3YZU1 Olfr807-202ENSMUST00000213379 1866 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
Shank1D3YZU1 Gm26396-201ENSMUST00000104093 132 ntBASIC2.78□□□□□ -1.96
Shank1D3YZU1 Gm12568-201ENSMUST00000117362 624 ntBASIC2.78□□□□□ -1.96
Shank1D3YZU1 Gm14594-201ENSMUST00000118052 537 ntBASIC2.78□□□□□ -1.96
Shank1D3YZU1 Gm14627-201ENSMUST00000118931 567 ntBASIC2.78□□□□□ -1.96
Shank1D3YZU1 Gm14590-201ENSMUST00000118934 537 ntBASIC2.78□□□□□ -1.96
Shank1D3YZU1 Gm13804-201ENSMUST00000119552 172 ntBASIC2.78□□□□□ -1.96
Shank1D3YZU1 Gm12617-201ENSMUST00000121268 381 ntBASIC2.78□□□□□ -1.96
Shank1D3YZU1 Gm25270-201ENSMUST00000122606 138 ntBASIC2.78□□□□□ -1.96
Shank1D3YZU1 Clec5a-203ENSMUST00000129948 858 ntAPPRIS P4 TSL 1 (best) BASIC2.78□□□□□ -1.96
Shank1D3YZU1 Gm24876-201ENSMUST00000158780 92 ntBASIC2.78□□□□□ -1.96
Retrieved 100 of 76,532 protein–RNA pairs in 148.9 ms