Protein–RNA interactions for Protein: A3KGF9

Ccdc9b, Coiled-coil domain-containing protein 9B, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9bA3KGF9 Gm15313-201ENSMUST00000119179 282 ntBASIC4.3□□□□□ -1.72
Ccdc9bA3KGF9 Gm11790-201ENSMUST00000119569 455 ntBASIC4.3□□□□□ -1.72
Ccdc9bA3KGF9 Gm13581-201ENSMUST00000120675 278 ntBASIC4.3□□□□□ -1.72
Ccdc9bA3KGF9 Defa-ps8-201ENSMUST00000120972 279 ntBASIC4.3□□□□□ -1.72
Ccdc9bA3KGF9 Gm13092-201ENSMUST00000136346 260 ntBASIC4.3□□□□□ -1.72
Ccdc9bA3KGF9 Gm26287-201ENSMUST00000158887 81 ntBASIC4.3□□□□□ -1.72
Ccdc9bA3KGF9 Gm10075-201ENSMUST00000162030 545 ntBASIC4.3□□□□□ -1.72
Ccdc9bA3KGF9 Gm22118-201ENSMUST00000175593 171 ntBASIC4.3□□□□□ -1.72
Ccdc9bA3KGF9 Gm26928-201ENSMUST00000182674 572 ntBASIC4.3□□□□□ -1.72
Ccdc9bA3KGF9 Mir6414-201ENSMUST00000183685 82 ntBASIC4.3□□□□□ -1.72
Ccdc9bA3KGF9 Gm28755-201ENSMUST00000185773 199 ntBASIC4.3□□□□□ -1.72
Ccdc9bA3KGF9 Gm19123-201ENSMUST00000190716 651 ntBASIC4.3□□□□□ -1.72
Ccdc9bA3KGF9 Ighv3-4-201ENSMUST00000193408 353 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Ccdc9bA3KGF9 Gm32222-201ENSMUST00000203296 298 ntBASIC4.3□□□□□ -1.72
Ccdc9bA3KGF9 Gm44261-201ENSMUST00000203337 209 ntBASIC4.3□□□□□ -1.72
Ccdc9bA3KGF9 Klk1b28-ps-201ENSMUST00000206374 217 ntBASIC4.3□□□□□ -1.72
Ccdc9bA3KGF9 Gm38944-201ENSMUST00000208218 512 ntTSL 2 BASIC4.3□□□□□ -1.72
Ccdc9bA3KGF9 AC159709.1-201ENSMUST00000220445 349 ntBASIC4.3□□□□□ -1.72
Ccdc9bA3KGF9 Gm18921-201ENSMUST00000221798 366 ntBASIC4.3□□□□□ -1.72
Ccdc9bA3KGF9 Znrd1as-201ENSMUST00000040177 976 ntAPPRIS P2 TSL 1 (best) BASIC4.3□□□□□ -1.72
Ccdc9bA3KGF9 Mup14-201ENSMUST00000071005 652 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
Ccdc9bA3KGF9 Gm25698-201ENSMUST00000082897 107 ntBASIC4.3□□□□□ -1.72
Ccdc9bA3KGF9 Mir32-201ENSMUST00000083610 70 ntBASIC4.3□□□□□ -1.72
Ccdc9bA3KGF9 Mir338-201ENSMUST00000083666 98 ntBASIC4.3□□□□□ -1.72
Ccdc9bA3KGF9 n-R5s3-201ENSMUST00000083879 112 ntBASIC4.3□□□□□ -1.72
Ccdc9bA3KGF9 Gm10542-201ENSMUST00000097586 273 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Ccdc9bA3KGF9 Gm16332-201ENSMUST00000134229 2967 ntBASIC4.3□□□□□ -1.72
Ccdc9bA3KGF9 Olfr620-201ENSMUST00000052152 3157 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Ccdc9bA3KGF9 AC165106.3-201ENSMUST00000228191 3843 ntBASIC4.3□□□□□ -1.72
Ccdc9bA3KGF9 Olfr164-202ENSMUST00000216157 2792 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Ccdc9bA3KGF9 Gm42986-201ENSMUST00000201618 3385 ntBASIC4.3□□□□□ -1.72
Ccdc9bA3KGF9 Olfr1496-202ENSMUST00000209137 2394 ntAPPRIS ALT1 TSL 5 BASIC4.29□□□□□ -1.72
Ccdc9bA3KGF9 Gm43130-201ENSMUST00000197721 3907 ntBASIC4.29□□□□□ -1.72
Ccdc9bA3KGF9 Cylc1-201ENSMUST00000101282 1923 ntAPPRIS P2 TSL 1 (best) BASIC4.29□□□□□ -1.72
Ccdc9bA3KGF9 Olfr715b-202ENSMUST00000215713 3879 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Ccdc9bA3KGF9 Trbj1-4-201ENSMUST00000103287 51 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Ccdc9bA3KGF9 Gm15223-201ENSMUST00000120989 826 ntBASIC4.29□□□□□ -1.72
Ccdc9bA3KGF9 5330434G04Rik-201ENSMUST00000130264 511 ntTSL 3 BASIC4.29□□□□□ -1.72
Ccdc9bA3KGF9 Gm22378-201ENSMUST00000157481 111 ntBASIC4.29□□□□□ -1.72
Ccdc9bA3KGF9 Gm17186-201ENSMUST00000171742 456 ntBASIC4.29□□□□□ -1.72
Ccdc9bA3KGF9 Cox6b2-202ENSMUST00000182048 465 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Ccdc9bA3KGF9 Gm19503-201ENSMUST00000187109 241 ntBASIC4.29□□□□□ -1.72
Ccdc9bA3KGF9 Gm7468-201ENSMUST00000203900 652 ntBASIC4.29□□□□□ -1.72
Ccdc9bA3KGF9 Gm44030-201ENSMUST00000204865 432 ntBASIC4.29□□□□□ -1.72
Ccdc9bA3KGF9 AC155715.1-201ENSMUST00000213575 463 ntBASIC4.29□□□□□ -1.72
Ccdc9bA3KGF9 AC173345.1-201ENSMUST00000222837 306 ntTSL 5 BASIC4.29□□□□□ -1.72
Ccdc9bA3KGF9 AC147545.1-201ENSMUST00000227528 108 ntBASIC4.29□□□□□ -1.72
Ccdc9bA3KGF9 Gm22806-201ENSMUST00000082738 136 ntBASIC4.29□□□□□ -1.72
Ccdc9bA3KGF9 Gm23042-201ENSMUST00000083866 101 ntBASIC4.29□□□□□ -1.72
Ccdc9bA3KGF9 Gm22353-201ENSMUST00000083918 136 ntBASIC4.29□□□□□ -1.72
Ccdc9bA3KGF9 Gm10337-201ENSMUST00000096145 165 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Ccdc9bA3KGF9 Cntn6-205ENSMUST00000162872 3467 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Ccdc9bA3KGF9 Gm37461-201ENSMUST00000193929 3704 ntBASIC4.29□□□□□ -1.72
Ccdc9bA3KGF9 Postn-204ENSMUST00000117373 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
Ccdc9bA3KGF9 Vmn2r116-201ENSMUST00000164856 2571 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Ccdc9bA3KGF9 Gm2004-201ENSMUST00000109049 1749 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Ccdc9bA3KGF9 Gm14419-202ENSMUST00000126358 1749 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Ccdc9bA3KGF9 Olfr1317-204ENSMUST00000216988 2488 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Ccdc9bA3KGF9 Csn1s2b-202ENSMUST00000101057 1668 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Ccdc9bA3KGF9 Fsd1l-207ENSMUST00000180164 7340 ntAPPRIS ALT1 TSL 5 BASIC4.29□□□□□ -1.72
Ccdc9bA3KGF9 Xirp2-202ENSMUST00000112347 11979 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Ccdc9bA3KGF9 Olfr145-202ENSMUST00000213688 6691 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Ccdc9bA3KGF9 Gm21244-202ENSMUST00000189201 3115 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Ccdc9bA3KGF9 Zfp846-201ENSMUST00000060063 1626 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Ccdc9bA3KGF9 Slfn9-202ENSMUST00000092840 3862 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Ccdc9bA3KGF9 C2cd6-201ENSMUST00000097080 2131 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
Ccdc9bA3KGF9 Olfr410-203ENSMUST00000214490 5075 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Ccdc9bA3KGF9 Slc9c1-201ENSMUST00000159945 3836 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Ccdc9bA3KGF9 Vmn2r91-201ENSMUST00000172359 2571 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Ccdc9bA3KGF9 Olfr1382-202ENSMUST00000213152 4236 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Ccdc9bA3KGF9 Pfpl-201ENSMUST00000168148 3918 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Ccdc9bA3KGF9 Vmn1r219-203ENSMUST00000227388 7948 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Ccdc9bA3KGF9 Vmn1r43-203ENSMUST00000226741 12542 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Ccdc9bA3KGF9 Mir465b-1-201ENSMUST00000103940 79 ntBASIC4.28□□□□□ -1.72
Ccdc9bA3KGF9 Gm25419-201ENSMUST00000104215 191 ntBASIC4.28□□□□□ -1.72
Ccdc9bA3KGF9 Mir465b-2-201ENSMUST00000104662 79 ntBASIC4.28□□□□□ -1.72
Ccdc9bA3KGF9 Gm22204-201ENSMUST00000122654 327 ntBASIC4.28□□□□□ -1.72
Ccdc9bA3KGF9 Gm22984-201ENSMUST00000122751 122 ntBASIC4.28□□□□□ -1.72
Ccdc9bA3KGF9 Gm13096-201ENSMUST00000127752 251 ntTSL 5 BASIC4.28□□□□□ -1.72
Ccdc9bA3KGF9 Gm22447-201ENSMUST00000158155 92 ntBASIC4.28□□□□□ -1.72
Ccdc9bA3KGF9 Gm24001-201ENSMUST00000158463 85 ntBASIC4.28□□□□□ -1.72
Ccdc9bA3KGF9 Tshb-202ENSMUST00000170856 552 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Ccdc9bA3KGF9 Gm20651-201ENSMUST00000177219 329 ntBASIC4.28□□□□□ -1.72
Ccdc9bA3KGF9 Rnu6-ps2-201ENSMUST00000178059 107 ntBASIC4.28□□□□□ -1.72
Ccdc9bA3KGF9 Gm4707-202ENSMUST00000183937 276 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Ccdc9bA3KGF9 Gm27568-201ENSMUST00000184220 99 ntBASIC4.28□□□□□ -1.72
Ccdc9bA3KGF9 Mir6383-201ENSMUST00000184545 116 ntBASIC4.28□□□□□ -1.72
Ccdc9bA3KGF9 Scgb2b28-ps-201ENSMUST00000188974 337 ntBASIC4.28□□□□□ -1.72
Ccdc9bA3KGF9 Dnajc5g-202ENSMUST00000201740 581 ntAPPRIS ALT2 TSL 3 BASIC4.28□□□□□ -1.72
Ccdc9bA3KGF9 Gm32536-201ENSMUST00000205209 445 ntBASIC4.28□□□□□ -1.72
Ccdc9bA3KGF9 Gm19790-201ENSMUST00000214414 251 ntBASIC4.28□□□□□ -1.72
Ccdc9bA3KGF9 Gm7040-201ENSMUST00000223271 443 ntBASIC4.28□□□□□ -1.72
Ccdc9bA3KGF9 AC134860.6-201ENSMUST00000226038 285 ntBASIC4.28□□□□□ -1.72
Ccdc9bA3KGF9 AC133910.1-201ENSMUST00000228128 624 ntBASIC4.28□□□□□ -1.72
Ccdc9bA3KGF9 Snord22-201ENSMUST00000083153 126 ntBASIC4.28□□□□□ -1.72
Ccdc9bA3KGF9 Olfr1090-201ENSMUST00000099875 942 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Ccdc9bA3KGF9 Btbd35f13-201ENSMUST00000177912 1701 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Ccdc9bA3KGF9 Erv3-201ENSMUST00000040941 3378 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Ccdc9bA3KGF9 Ptgs2os-202ENSMUST00000181915 2937 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Ccdc9bA3KGF9 Olfr1318-202ENSMUST00000214063 3556 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 83.1 ms