Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Igkv13-76-201ENSMUST00000197621 347 ntBASIC1.32□□□□□ -2.2
Col6a4A2AX52 Gm36017-201ENSMUST00000199005 923 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
Col6a4A2AX52 4930598N05Rik-205ENSMUST00000208693 873 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
Col6a4A2AX52 AC102312.1-201ENSMUST00000217752 475 ntTSL 3 BASIC1.32□□□□□ -2.2
Col6a4A2AX52 AC160061.1-201ENSMUST00000217766 533 ntTSL 3 BASIC1.32□□□□□ -2.2
Col6a4A2AX52 Gm19540-201ENSMUST00000221843 810 ntBASIC1.32□□□□□ -2.2
Col6a4A2AX52 CT009713.9-201ENSMUST00000223604 389 ntBASIC1.32□□□□□ -2.2
Col6a4A2AX52 Gm16976-205ENSMUST00000227324 226 ntBASIC1.32□□□□□ -2.2
Col6a4A2AX52 Skint2-203ENSMUST00000106560 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC1.32□□□□□ -2.2
Col6a4A2AX52 Olfr805-204ENSMUST00000217219 3314 ntAPPRIS P1 TSL 5 BASIC1.32□□□□□ -2.2
Col6a4A2AX52 Olfr629-202ENSMUST00000213906 2548 ntAPPRIS P1 TSL 5 BASIC1.32□□□□□ -2.2
Col6a4A2AX52 Gm12706-201ENSMUST00000121588 698 ntBASIC1.32□□□□□ -2.2
Col6a4A2AX52 Gm16363-201ENSMUST00000132460 877 ntBASIC1.32□□□□□ -2.2
Col6a4A2AX52 Gm25958-201ENSMUST00000175114 71 ntBASIC1.32□□□□□ -2.2
Col6a4A2AX52 Olfr421-ps1-201ENSMUST00000179386 1050 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
Col6a4A2AX52 Gm18406-201ENSMUST00000185872 669 ntBASIC1.32□□□□□ -2.2
Col6a4A2AX52 Gm28200-201ENSMUST00000187778 315 ntBASIC1.32□□□□□ -2.2
Col6a4A2AX52 Gm29378-201ENSMUST00000188723 315 ntBASIC1.32□□□□□ -2.2
Col6a4A2AX52 Gm28909-201ENSMUST00000189406 315 ntBASIC1.32□□□□□ -2.2
Col6a4A2AX52 Gm28552-201ENSMUST00000190725 388 ntBASIC1.32□□□□□ -2.2
Col6a4A2AX52 Gm9632-201ENSMUST00000195934 643 ntBASIC1.32□□□□□ -2.2
Col6a4A2AX52 Gm44476-201ENSMUST00000196225 91 ntBASIC1.32□□□□□ -2.2
Col6a4A2AX52 Gm45189-201ENSMUST00000208567 363 ntBASIC1.32□□□□□ -2.2
Col6a4A2AX52 Gm34113-201ENSMUST00000213796 388 ntTSL 2 BASIC1.32□□□□□ -2.2
Col6a4A2AX52 AC153801.1-201ENSMUST00000217904 947 ntBASIC1.32□□□□□ -2.2
Col6a4A2AX52 Gm35101-201ENSMUST00000219218 243 ntTSL 5 BASIC1.32□□□□□ -2.2
Col6a4A2AX52 Defb8-201ENSMUST00000033854 287 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
Col6a4A2AX52 Olfr914-201ENSMUST00000057755 951 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
Col6a4A2AX52 Olfr854-201ENSMUST00000072419 948 ntAPPRIS P2 BASIC1.32□□□□□ -2.2
Col6a4A2AX52 V1ra8-201ENSMUST00000078371 890 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
Col6a4A2AX52 Snord104-201ENSMUST00000083192 70 ntBASIC1.32□□□□□ -2.2
Col6a4A2AX52 Olfr894-202ENSMUST00000212992 3234 ntAPPRIS ALT2 TSL 5 BASIC1.32□□□□□ -2.2
Col6a4A2AX52 AC161250.2-201ENSMUST00000215114 3107 ntBASIC1.32□□□□□ -2.2
Col6a4A2AX52 Olfr807-203ENSMUST00000217106 1788 ntAPPRIS P1 TSL 5 BASIC1.31□□□□□ -2.2
Col6a4A2AX52 Gm14771-201ENSMUST00000118249 203 ntBASIC1.31□□□□□ -2.2
Col6a4A2AX52 Gm23221-201ENSMUST00000158118 93 ntBASIC1.31□□□□□ -2.2
Col6a4A2AX52 Vmn1r224-201ENSMUST00000170076 897 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
Col6a4A2AX52 Vmn1r-ps86-201ENSMUST00000174052 547 ntBASIC1.31□□□□□ -2.2
Col6a4A2AX52 Gm43489-201ENSMUST00000196810 993 ntBASIC1.31□□□□□ -2.2
Col6a4A2AX52 Olfr1543-ps1-201ENSMUST00000217448 908 ntBASIC1.31□□□□□ -2.2
Col6a4A2AX52 Sprr1b-201ENSMUST00000062160 830 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
Col6a4A2AX52 Gm24624-201ENSMUST00000082617 164 ntBASIC1.31□□□□□ -2.2
Col6a4A2AX52 n-R5s26-201ENSMUST00000104601 122 ntBASIC1.31□□□□□ -2.2
Col6a4A2AX52 Gm15526-201ENSMUST00000112504 204 ntBASIC1.31□□□□□ -2.2
Col6a4A2AX52 Rpl31-ps22-201ENSMUST00000117961 337 ntBASIC1.31□□□□□ -2.2
Col6a4A2AX52 Gm6923-201ENSMUST00000118343 406 ntBASIC1.31□□□□□ -2.2
Col6a4A2AX52 Gm13876-201ENSMUST00000118451 261 ntBASIC1.31□□□□□ -2.2
Col6a4A2AX52 Gm23583-201ENSMUST00000158533 289 ntBASIC1.31□□□□□ -2.2
Col6a4A2AX52 Gm25161-201ENSMUST00000158913 132 ntBASIC1.31□□□□□ -2.2
Col6a4A2AX52 Mir3098-201ENSMUST00000175416 87 ntBASIC1.31□□□□□ -2.2
Col6a4A2AX52 Gm22929-201ENSMUST00000175517 107 ntBASIC1.31□□□□□ -2.2
Col6a4A2AX52 4930590L20Rik-201ENSMUST00000193820 553 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
Col6a4A2AX52 Gm43115-201ENSMUST00000196244 160 ntBASIC1.31□□□□□ -2.2
Col6a4A2AX52 Gm43732-201ENSMUST00000200260 511 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
Col6a4A2AX52 Gm43659-201ENSMUST00000200894 628 ntBASIC1.31□□□□□ -2.2
Col6a4A2AX52 Crs-ps-201ENSMUST00000203723 760 ntBASIC1.31□□□□□ -2.2
Col6a4A2AX52 Gm44679-201ENSMUST00000207202 2908 ntBASIC1.31□□□□□ -2.2
Col6a4A2AX52 Gm19137-201ENSMUST00000213790 1164 ntBASIC1.31□□□□□ -2.2
Col6a4A2AX52 AC126043.1-201ENSMUST00000221304 1141 ntBASIC1.31□□□□□ -2.2
Col6a4A2AX52 AC158142.2-201ENSMUST00000227892 635 ntBASIC1.31□□□□□ -2.2
Col6a4A2AX52 Gm26226-201ENSMUST00000082509 116 ntBASIC1.31□□□□□ -2.2
Col6a4A2AX52 Mir423-201ENSMUST00000083584 109 ntBASIC1.31□□□□□ -2.2
Col6a4A2AX52 Gm17976-201ENSMUST00000184037 1909 ntBASIC1.3□□□□□ -2.2
Col6a4A2AX52 Vmn1r87-202ENSMUST00000211249 1835 ntAPPRIS P1 TSL 3 BASIC1.3□□□□□ -2.2
Col6a4A2AX52 Mir19b-1-201ENSMUST00000102301 87 ntBASIC1.3□□□□□ -2.2
Col6a4A2AX52 Gm14623-201ENSMUST00000121398 603 ntBASIC1.3□□□□□ -2.2
Col6a4A2AX52 Gm22208-201ENSMUST00000122658 110 ntBASIC1.3□□□□□ -2.2
Col6a4A2AX52 Gm24630-201ENSMUST00000122768 106 ntBASIC1.3□□□□□ -2.2
Col6a4A2AX52 Gm24288-201ENSMUST00000157630 144 ntBASIC1.3□□□□□ -2.2
Col6a4A2AX52 Gm7247-201ENSMUST00000162998 1157 ntAPPRIS P1 TSL 5 BASIC1.3□□□□□ -2.2
Col6a4A2AX52 Gm18354-201ENSMUST00000173515 1068 ntBASIC1.3□□□□□ -2.2
Col6a4A2AX52 Gm5731-201ENSMUST00000190969 481 ntBASIC1.3□□□□□ -2.2
Col6a4A2AX52 Gm43739-201ENSMUST00000198294 307 ntBASIC1.3□□□□□ -2.2
Col6a4A2AX52 Gm44478-201ENSMUST00000204875 114 ntBASIC1.3□□□□□ -2.2
Col6a4A2AX52 Olfr1007-ps1-201ENSMUST00000217468 138 ntBASIC1.3□□□□□ -2.2
Col6a4A2AX52 CT030254.3-201ENSMUST00000225959 1231 ntBASIC1.3□□□□□ -2.2
Col6a4A2AX52 Olfr867-201ENSMUST00000060780 996 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
Col6a4A2AX52 Olfr729-201ENSMUST00000061020 972 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
Col6a4A2AX52 Gm22740-201ENSMUST00000083439 109 ntBASIC1.3□□□□□ -2.2
Col6a4A2AX52 Gm22353-201ENSMUST00000083918 136 ntBASIC1.3□□□□□ -2.2
Col6a4A2AX52 Olfr1095-201ENSMUST00000099874 927 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
Col6a4A2AX52 Gm11284-201ENSMUST00000121910 1887 ntBASIC1.3□□□□□ -2.2
Col6a4A2AX52 Gm42524-201ENSMUST00000202881 2214 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
Col6a4A2AX52 Igkv17-121-201ENSMUST00000103315 350 ntAPPRIS ALT2 BASIC1.29□□□□□ -2.2
Col6a4A2AX52 Gm22794-201ENSMUST00000157228 306 ntBASIC1.29□□□□□ -2.2
Col6a4A2AX52 Gm24770-201ENSMUST00000158505 92 ntBASIC1.29□□□□□ -2.2
Col6a4A2AX52 Gm26029-201ENSMUST00000158659 132 ntBASIC1.29□□□□□ -2.2
Col6a4A2AX52 Gm25198-201ENSMUST00000178574 110 ntBASIC1.29□□□□□ -2.2
Col6a4A2AX52 Gm27245-201ENSMUST00000184385 376 ntBASIC1.29□□□□□ -2.2
Col6a4A2AX52 Gm40040-202ENSMUST00000196337 305 ntTSL 3 BASIC1.29□□□□□ -2.2
Col6a4A2AX52 Olfr883-201ENSMUST00000072974 930 ntAPPRIS P1 BASIC1.29□□□□□ -2.2
Col6a4A2AX52 Olfr781-202ENSMUST00000204108 1304 ntAPPRIS P1 TSL 3 BASIC1.29□□□□□ -2.2
Col6a4A2AX52 Gm15314-201ENSMUST00000120740 1887 ntBASIC1.29□□□□□ -2.2
Col6a4A2AX52 Gm37063-201ENSMUST00000194678 3520 ntBASIC1.29□□□□□ -2.2
Col6a4A2AX52 Gm24951-201ENSMUST00000102182 109 ntBASIC1.29□□□□□ -2.2
Col6a4A2AX52 Gm7123-201ENSMUST00000117647 213 ntBASIC1.29□□□□□ -2.2
Col6a4A2AX52 Gm13941-201ENSMUST00000127918 736 ntAPPRIS P1 TSL 3 BASIC1.29□□□□□ -2.2
Col6a4A2AX52 Gm26099-201ENSMUST00000157248 109 ntBASIC1.29□□□□□ -2.2
Col6a4A2AX52 Gm23329-201ENSMUST00000157415 108 ntBASIC1.29□□□□□ -2.2
Col6a4A2AX52 Gm23505-201ENSMUST00000158989 130 ntBASIC1.29□□□□□ -2.2
Retrieved 100 of 76,532 protein–RNA pairs in 87.2 ms