Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Gm14600-201ENSMUST00000121032 630 ntBASIC2.26□□□□□ -2.05
Scn3aA2ASI5 Gm11998-201ENSMUST00000146304 972 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
Scn3aA2ASI5 Mir9-3-201ENSMUST00000175497 90 ntBASIC2.26□□□□□ -2.05
Scn3aA2ASI5 Mir7009-201ENSMUST00000184519 64 ntBASIC2.26□□□□□ -2.05
Scn3aA2ASI5 Gm29658-201ENSMUST00000185404 230 ntBASIC2.26□□□□□ -2.05
Scn3aA2ASI5 Mir7232-201ENSMUST00000197929 74 ntBASIC2.26□□□□□ -2.05
Scn3aA2ASI5 Gm15235-201ENSMUST00000200572 194 ntBASIC2.26□□□□□ -2.05
Scn3aA2ASI5 Gm45687-201ENSMUST00000209454 155 ntBASIC2.26□□□□□ -2.05
Scn3aA2ASI5 Gm45654-201ENSMUST00000210980 123 ntBASIC2.26□□□□□ -2.05
Scn3aA2ASI5 Gm45742-201ENSMUST00000212400 433 ntBASIC2.26□□□□□ -2.05
Scn3aA2ASI5 Gm35262-201ENSMUST00000215133 267 ntBASIC2.26□□□□□ -2.05
Scn3aA2ASI5 AC152979.4-201ENSMUST00000219893 379 ntBASIC2.26□□□□□ -2.05
Scn3aA2ASI5 Trdn-207ENSMUST00000219931 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC2.26□□□□□ -2.05
Scn3aA2ASI5 AC154552.5-201ENSMUST00000222352 207 ntBASIC2.26□□□□□ -2.05
Scn3aA2ASI5 AC117814.1-201ENSMUST00000226135 352 ntBASIC2.26□□□□□ -2.05
Scn3aA2ASI5 AC121960.3-201ENSMUST00000227077 623 ntBASIC2.26□□□□□ -2.05
Scn3aA2ASI5 Olfr143-202ENSMUST00000213129 3449 ntAPPRIS ALT2 TSL 5 BASIC2.25□□□□□ -2.05
Scn3aA2ASI5 Gm15110-201ENSMUST00000117545 881 ntBASIC2.25□□□□□ -2.05
Scn3aA2ASI5 Gm6923-201ENSMUST00000118343 406 ntBASIC2.25□□□□□ -2.05
Scn3aA2ASI5 Gm15312-201ENSMUST00000118827 271 ntBASIC2.25□□□□□ -2.05
Scn3aA2ASI5 Gm15309-201ENSMUST00000121644 240 ntBASIC2.25□□□□□ -2.05
Scn3aA2ASI5 Gm20415-201ENSMUST00000172877 423 ntBASIC2.25□□□□□ -2.05
Scn3aA2ASI5 Gm27753-201ENSMUST00000184742 203 ntBASIC2.25□□□□□ -2.05
Scn3aA2ASI5 Gm37754-201ENSMUST00000194406 452 ntTSL 5 BASIC2.25□□□□□ -2.05
Scn3aA2ASI5 Gm9632-201ENSMUST00000195934 643 ntBASIC2.25□□□□□ -2.05
Scn3aA2ASI5 Gm44720-201ENSMUST00000206076 260 ntBASIC2.25□□□□□ -2.05
Scn3aA2ASI5 Gm18645-201ENSMUST00000209593 651 ntBASIC2.25□□□□□ -2.05
Scn3aA2ASI5 AC154424.1-201ENSMUST00000225883 799 ntBASIC2.25□□□□□ -2.05
Scn3aA2ASI5 Vmn1r20-201ENSMUST00000226808 912 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
Scn3aA2ASI5 Pmch-201ENSMUST00000048621 749 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
Scn3aA2ASI5 Gm25813-201ENSMUST00000082748 191 ntBASIC2.25□□□□□ -2.05
Scn3aA2ASI5 Gm5127-201ENSMUST00000101296 1455 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
Scn3aA2ASI5 Vmn1r28-202ENSMUST00000227805 10892 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
Scn3aA2ASI5 Gm7489-201ENSMUST00000100666 1222 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
Scn3aA2ASI5 Mir542-201ENSMUST00000102186 85 ntBASIC2.25□□□□□ -2.05
Scn3aA2ASI5 Mir599-201ENSMUST00000102378 88 ntBASIC2.25□□□□□ -2.05
Scn3aA2ASI5 Vmn1r3-201ENSMUST00000105159 1011 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
Scn3aA2ASI5 Rpl31-ps22-201ENSMUST00000117961 337 ntBASIC2.25□□□□□ -2.05
Scn3aA2ASI5 Cox20-ps-201ENSMUST00000119872 353 ntBASIC2.25□□□□□ -2.05
Scn3aA2ASI5 Gm12372-201ENSMUST00000121654 768 ntBASIC2.25□□□□□ -2.05
Scn3aA2ASI5 Gm23387-201ENSMUST00000158586 107 ntBASIC2.25□□□□□ -2.05
Scn3aA2ASI5 Gm26024-201ENSMUST00000158657 322 ntBASIC2.25□□□□□ -2.05
Scn3aA2ASI5 Gm17727-201ENSMUST00000171898 643 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
Scn3aA2ASI5 Mir6411-201ENSMUST00000183556 108 ntBASIC2.25□□□□□ -2.05
Scn3aA2ASI5 Gm27235-201ENSMUST00000184431 903 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
Scn3aA2ASI5 Gm21294-201ENSMUST00000186443 934 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
Scn3aA2ASI5 Gm29051-201ENSMUST00000190184 369 ntTSL 5 BASIC2.25□□□□□ -2.05
Scn3aA2ASI5 Gm20811-201ENSMUST00000190500 553 ntBASIC2.25□□□□□ -2.05
Scn3aA2ASI5 Trbv12-3-201ENSMUST00000192675 372 ntBASIC2.25□□□□□ -2.05
Scn3aA2ASI5 Gm42796-201ENSMUST00000199913 1087 ntBASIC2.25□□□□□ -2.05
Scn3aA2ASI5 Gm44554-201ENSMUST00000208738 147 ntBASIC2.25□□□□□ -2.05
Scn3aA2ASI5 Gm18892-201ENSMUST00000217628 881 ntBASIC2.25□□□□□ -2.05
Scn3aA2ASI5 AC138027.1-201ENSMUST00000218324 472 ntTSL 5 BASIC2.25□□□□□ -2.05
Scn3aA2ASI5 AC122465.2-201ENSMUST00000221774 354 ntBASIC2.25□□□□□ -2.05
Scn3aA2ASI5 4930520P13Rik-201ENSMUST00000222622 505 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
Scn3aA2ASI5 AC173345.1-201ENSMUST00000222837 306 ntTSL 5 BASIC2.25□□□□□ -2.05
Scn3aA2ASI5 AC163664.1-201ENSMUST00000226251 1248 ntBASIC2.25□□□□□ -2.05
Scn3aA2ASI5 Olfr1313-202ENSMUST00000213577 2588 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
Scn3aA2ASI5 Olfr1229-203ENSMUST00000214593 3404 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
Scn3aA2ASI5 Cpxcr1-201ENSMUST00000101269 1596 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
Scn3aA2ASI5 Zfy2-201ENSMUST00000115891 2816 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
Scn3aA2ASI5 Gm12106-201ENSMUST00000116006 1200 ntBASIC2.24□□□□□ -2.05
Scn3aA2ASI5 Gm11693-201ENSMUST00000119625 565 ntBASIC2.24□□□□□ -2.05
Scn3aA2ASI5 Gm37692-201ENSMUST00000192633 232 ntBASIC2.24□□□□□ -2.05
Scn3aA2ASI5 Igkv4-65-201ENSMUST00000196986 358 ntBASIC2.24□□□□□ -2.05
Scn3aA2ASI5 Gm43493-201ENSMUST00000199837 202 ntBASIC2.24□□□□□ -2.05
Scn3aA2ASI5 Crs-ps-201ENSMUST00000203723 760 ntBASIC2.24□□□□□ -2.05
Scn3aA2ASI5 Gm43994-201ENSMUST00000203809 227 ntTSL 5 BASIC2.24□□□□□ -2.05
Scn3aA2ASI5 Gm43971-201ENSMUST00000205010 743 ntTSL 3 BASIC2.24□□□□□ -2.05
Scn3aA2ASI5 Olfr783-ps1-201ENSMUST00000205105 441 ntBASIC2.24□□□□□ -2.05
Scn3aA2ASI5 Gm7675-201ENSMUST00000208828 686 ntBASIC2.24□□□□□ -2.05
Scn3aA2ASI5 AC107808.2-201ENSMUST00000213542 1027 ntTSL 5 BASIC2.24□□□□□ -2.05
Scn3aA2ASI5 AC120540.1-201ENSMUST00000221879 324 ntBASIC2.24□□□□□ -2.05
Scn3aA2ASI5 AC124569.1-201ENSMUST00000225932 101 ntBASIC2.24□□□□□ -2.05
Scn3aA2ASI5 Olfr854-201ENSMUST00000072419 948 ntAPPRIS P2 BASIC2.24□□□□□ -2.05
Scn3aA2ASI5 Olfr1459-201ENSMUST00000078299 1102 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
Scn3aA2ASI5 Gm8675-201ENSMUST00000201408 1856 ntBASIC2.23□□□□□ -2.05
Scn3aA2ASI5 Gm19194-201ENSMUST00000192015 3774 ntBASIC2.23□□□□□ -2.05
Scn3aA2ASI5 Gm12640-201ENSMUST00000120097 310 ntBASIC2.23□□□□□ -2.05
Scn3aA2ASI5 Gm15037-201ENSMUST00000120358 259 ntBASIC2.23□□□□□ -2.05
Scn3aA2ASI5 Gm12706-201ENSMUST00000121588 698 ntBASIC2.23□□□□□ -2.05
Scn3aA2ASI5 Gm8080-201ENSMUST00000122046 1155 ntBASIC2.23□□□□□ -2.05
Scn3aA2ASI5 Gm17183-201ENSMUST00000171170 493 ntBASIC2.23□□□□□ -2.05
Scn3aA2ASI5 Gm27342-201ENSMUST00000183530 109 ntBASIC2.23□□□□□ -2.05
Scn3aA2ASI5 Gm17929-201ENSMUST00000186851 627 ntBASIC2.23□□□□□ -2.05
Scn3aA2ASI5 Gm29288-201ENSMUST00000191582 901 ntBASIC2.23□□□□□ -2.05
Scn3aA2ASI5 Gm44954-201ENSMUST00000208513 227 ntBASIC2.23□□□□□ -2.05
Scn3aA2ASI5 CAAA01090811.1-201ENSMUST00000216828 277 ntBASIC2.23□□□□□ -2.05
Scn3aA2ASI5 CT030187.1-201ENSMUST00000220605 252 ntBASIC2.23□□□□□ -2.05
Scn3aA2ASI5 AC134335.1-201ENSMUST00000227626 329 ntBASIC2.23□□□□□ -2.05
Scn3aA2ASI5 Olfr814-201ENSMUST00000081367 933 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
Scn3aA2ASI5 Gm14910-201ENSMUST00000121037 1805 ntBASIC2.23□□□□□ -2.05
Scn3aA2ASI5 Gm25313-201ENSMUST00000101817 116 ntBASIC2.23□□□□□ -2.05
Scn3aA2ASI5 n-R5s26-201ENSMUST00000104601 122 ntBASIC2.23□□□□□ -2.05
Scn3aA2ASI5 Gm4732-201ENSMUST00000118778 473 ntBASIC2.23□□□□□ -2.05
Scn3aA2ASI5 Gm13627-201ENSMUST00000119700 706 ntBASIC2.23□□□□□ -2.05
Scn3aA2ASI5 Gm13273-201ENSMUST00000119737 159 ntBASIC2.23□□□□□ -2.05
Scn3aA2ASI5 n-R5s191-201ENSMUST00000122724 116 ntBASIC2.23□□□□□ -2.05
Scn3aA2ASI5 Gm13901-201ENSMUST00000137252 468 ntBASIC2.23□□□□□ -2.05
Scn3aA2ASI5 Gm12694-201ENSMUST00000149367 748 ntTSL 3 BASIC2.23□□□□□ -2.05
Retrieved 100 of 76,532 protein–RNA pairs in 96.2 ms