Protein–RNA interactions for Protein: A0A075B633

Trav8n-2, T cell receptor alpha variable 8n-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8n-2A0A075B633 Gm26270-201ENSMUST00000178690 94 ntBASIC2.21□□□□□ -2.06
Trav8n-2A0A075B633 Snord116l16-201ENSMUST00000178777 94 ntBASIC2.21□□□□□ -2.06
Trav8n-2A0A075B633 Gm23313-201ENSMUST00000178931 94 ntBASIC2.21□□□□□ -2.06
Trav8n-2A0A075B633 Snord116l17-201ENSMUST00000178936 94 ntBASIC2.21□□□□□ -2.06
Trav8n-2A0A075B633 Gm23089-201ENSMUST00000178947 94 ntBASIC2.21□□□□□ -2.06
Trav8n-2A0A075B633 Snord116l10-201ENSMUST00000179053 94 ntBASIC2.21□□□□□ -2.06
Trav8n-2A0A075B633 Gm24153-201ENSMUST00000179280 94 ntBASIC2.21□□□□□ -2.06
Trav8n-2A0A075B633 Gm25597-201ENSMUST00000179388 94 ntBASIC2.21□□□□□ -2.06
Trav8n-2A0A075B633 Snord116l1-201ENSMUST00000179518 94 ntBASIC2.21□□□□□ -2.06
Trav8n-2A0A075B633 Gm25816-201ENSMUST00000179764 94 ntBASIC2.21□□□□□ -2.06
Trav8n-2A0A075B633 Snord116l8-201ENSMUST00000179889 94 ntBASIC2.21□□□□□ -2.06
Trav8n-2A0A075B633 Snord116l7-201ENSMUST00000179895 94 ntBASIC2.21□□□□□ -2.06
Trav8n-2A0A075B633 Snord116l5-201ENSMUST00000179927 94 ntBASIC2.21□□□□□ -2.06
Trav8n-2A0A075B633 Snord116l6-201ENSMUST00000179955 94 ntBASIC2.21□□□□□ -2.06
Trav8n-2A0A075B633 Gm26188-201ENSMUST00000179963 94 ntBASIC2.21□□□□□ -2.06
Trav8n-2A0A075B633 Gm26433-201ENSMUST00000180227 94 ntBASIC2.21□□□□□ -2.06
Trav8n-2A0A075B633 Snord116l11-201ENSMUST00000180312 94 ntBASIC2.21□□□□□ -2.06
Trav8n-2A0A075B633 Gm22128-201ENSMUST00000180346 94 ntBASIC2.21□□□□□ -2.06
Trav8n-2A0A075B633 Gm27330-201ENSMUST00000184689 132 ntBASIC2.21□□□□□ -2.06
Trav8n-2A0A075B633 Mir7226-201ENSMUST00000184953 60 ntBASIC2.21□□□□□ -2.06
Trav8n-2A0A075B633 Gm38149-201ENSMUST00000191943 339 ntBASIC2.21□□□□□ -2.06
Trav8n-2A0A075B633 Gm37754-201ENSMUST00000194406 452 ntTSL 5 BASIC2.21□□□□□ -2.06
Trav8n-2A0A075B633 Rpl23a-ps5-201ENSMUST00000194566 466 ntBASIC2.21□□□□□ -2.06
Trav8n-2A0A075B633 Gm29920-201ENSMUST00000206876 754 ntBASIC2.21□□□□□ -2.06
Trav8n-2A0A075B633 AC132384.11-201ENSMUST00000219676 178 ntBASIC2.21□□□□□ -2.06
Trav8n-2A0A075B633 AC140285.1-201ENSMUST00000220472 452 ntTSL 3 BASIC2.21□□□□□ -2.06
Trav8n-2A0A075B633 AC154511.1-201ENSMUST00000222578 1587 ntBASIC2.21□□□□□ -2.06
Trav8n-2A0A075B633 AC116656.1-201ENSMUST00000227040 755 ntBASIC2.21□□□□□ -2.06
Trav8n-2A0A075B633 AC150560.3-201ENSMUST00000227442 455 ntBASIC2.21□□□□□ -2.06
Trav8n-2A0A075B633 AC109172.1-201ENSMUST00000227503 187 ntBASIC2.21□□□□□ -2.06
Trav8n-2A0A075B633 Defb39-201ENSMUST00000075504 252 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
Trav8n-2A0A075B633 Gm22740-201ENSMUST00000083439 109 ntBASIC2.21□□□□□ -2.06
Trav8n-2A0A075B633 Hif1a-202ENSMUST00000110461 4385 ntAPPRIS ALT2 TSL 1 (best) BASIC2.21□□□□□ -2.06
Trav8n-2A0A075B633 Vmn1r29-204ENSMUST00000228038 4520 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
Trav8n-2A0A075B633 C030005K15Rik-201ENSMUST00000166373 1882 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
Trav8n-2A0A075B633 Gm37895-201ENSMUST00000192448 4550 ntBASIC2.2□□□□□ -2.06
Trav8n-2A0A075B633 Gm27013-202ENSMUST00000205067 1436 ntBASIC2.2□□□□□ -2.06
Trav8n-2A0A075B633 Gm37928-201ENSMUST00000193265 4131 ntBASIC2.2□□□□□ -2.06
Trav8n-2A0A075B633 Gm25213-201ENSMUST00000102388 113 ntBASIC2.2□□□□□ -2.06
Trav8n-2A0A075B633 Gm25094-201ENSMUST00000103992 131 ntBASIC2.2□□□□□ -2.06
Trav8n-2A0A075B633 Gm22543-201ENSMUST00000104347 94 ntBASIC2.2□□□□□ -2.06
Trav8n-2A0A075B633 Catsper4-202ENSMUST00000105878 632 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
Trav8n-2A0A075B633 Gm22072-201ENSMUST00000116850 121 ntBASIC2.2□□□□□ -2.06
Trav8n-2A0A075B633 Gm12871-201ENSMUST00000118758 438 ntBASIC2.2□□□□□ -2.06
Trav8n-2A0A075B633 Cyp4a29-ps1-201ENSMUST00000120882 171 ntBASIC2.2□□□□□ -2.06
Trav8n-2A0A075B633 Gm12155-201ENSMUST00000121267 160 ntBASIC2.2□□□□□ -2.06
Trav8n-2A0A075B633 n-R5s164-201ENSMUST00000122664 112 ntBASIC2.2□□□□□ -2.06
Trav8n-2A0A075B633 Gm23470-201ENSMUST00000157129 120 ntBASIC2.2□□□□□ -2.06
Trav8n-2A0A075B633 Gm23588-201ENSMUST00000157659 99 ntBASIC2.2□□□□□ -2.06
Trav8n-2A0A075B633 Gm17555-201ENSMUST00000164042 1113 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
Trav8n-2A0A075B633 Gm20648-201ENSMUST00000175815 328 ntBASIC2.2□□□□□ -2.06
Trav8n-2A0A075B633 Rpl23a-ps12-201ENSMUST00000179178 468 ntBASIC2.2□□□□□ -2.06
Trav8n-2A0A075B633 Gm43587-201ENSMUST00000199590 204 ntBASIC2.2□□□□□ -2.06
Trav8n-2A0A075B633 Vmn1r-ps5-201ENSMUST00000202963 931 ntBASIC2.2□□□□□ -2.06
Trav8n-2A0A075B633 Olfr278-ps1-201ENSMUST00000205676 238 ntBASIC2.2□□□□□ -2.06
Trav8n-2A0A075B633 Gm45173-201ENSMUST00000206819 305 ntBASIC2.2□□□□□ -2.06
Trav8n-2A0A075B633 Gm18414-201ENSMUST00000210858 694 ntBASIC2.2□□□□□ -2.06
Trav8n-2A0A075B633 Gm18000-201ENSMUST00000212153 800 ntBASIC2.2□□□□□ -2.06
Trav8n-2A0A075B633 AC129017.1-201ENSMUST00000228363 270 ntBASIC2.2□□□□□ -2.06
Trav8n-2A0A075B633 AC161758.2-201ENSMUST00000228513 218 ntBASIC2.2□□□□□ -2.06
Trav8n-2A0A075B633 AC165415.1-201ENSMUST00000228924 273 ntBASIC2.2□□□□□ -2.06
Trav8n-2A0A075B633 Gm9174-201ENSMUST00000078149 255 ntBASIC2.2□□□□□ -2.06
Trav8n-2A0A075B633 Mir322-201ENSMUST00000083484 95 ntBASIC2.2□□□□□ -2.06
Trav8n-2A0A075B633 Gm43889-201ENSMUST00000203950 3681 ntBASIC2.2□□□□□ -2.06
Trav8n-2A0A075B633 Skint6-202ENSMUST00000171224 3723 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
Trav8n-2A0A075B633 Olfr1218-203ENSMUST00000215048 3900 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
Trav8n-2A0A075B633 Olfr830-202ENSMUST00000212723 3105 ntAPPRIS ALT2 TSL 5 BASIC2.2□□□□□ -2.06
Trav8n-2A0A075B633 Cyp3a44-201ENSMUST00000067479 1962 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
Trav8n-2A0A075B633 Gm37515-201ENSMUST00000193321 3817 ntBASIC2.19□□□□□ -2.06
Trav8n-2A0A075B633 Olfr726-204ENSMUST00000215105 1752 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
Trav8n-2A0A075B633 Gm26473-201ENSMUST00000116763 127 ntBASIC2.19□□□□□ -2.06
Trav8n-2A0A075B633 Olfr381-202ENSMUST00000119863 1065 ntAPPRIS P1 TSL 3 BASIC2.19□□□□□ -2.06
Trav8n-2A0A075B633 Cox20-ps-201ENSMUST00000119872 353 ntBASIC2.19□□□□□ -2.06
Trav8n-2A0A075B633 Gm14867-201ENSMUST00000120156 866 ntBASIC2.19□□□□□ -2.06
Trav8n-2A0A075B633 Gm13433-201ENSMUST00000121701 240 ntBASIC2.19□□□□□ -2.06
Trav8n-2A0A075B633 4930515L19Rik-201ENSMUST00000152352 769 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
Trav8n-2A0A075B633 Vmn1r185-201ENSMUST00000171039 1144 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
Trav8n-2A0A075B633 Vmn1r-ps61-201ENSMUST00000173771 822 ntBASIC2.19□□□□□ -2.06
Trav8n-2A0A075B633 Gm22858-201ENSMUST00000174972 76 ntBASIC2.19□□□□□ -2.06
Trav8n-2A0A075B633 Gm27428-201ENSMUST00000184289 110 ntBASIC2.19□□□□□ -2.06
Trav8n-2A0A075B633 Mir6371-201ENSMUST00000184470 111 ntBASIC2.19□□□□□ -2.06
Trav8n-2A0A075B633 1700010I02Rik-202ENSMUST00000188525 430 ntTSL 3 BASIC2.19□□□□□ -2.06
Trav8n-2A0A075B633 Gm19202-201ENSMUST00000198096 808 ntBASIC2.19□□□□□ -2.06
Trav8n-2A0A075B633 Gm45048-201ENSMUST00000207058 429 ntBASIC2.19□□□□□ -2.06
Trav8n-2A0A075B633 Gm45049-201ENSMUST00000207586 591 ntBASIC2.19□□□□□ -2.06
Trav8n-2A0A075B633 Gm18252-203ENSMUST00000215855 757 ntBASIC2.19□□□□□ -2.06
Trav8n-2A0A075B633 AC123830.1-201ENSMUST00000217156 609 ntTSL 3 BASIC2.19□□□□□ -2.06
Trav8n-2A0A075B633 AC139754.1-201ENSMUST00000219418 950 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
Trav8n-2A0A075B633 Gm2446-201ENSMUST00000220144 772 ntBASIC2.19□□□□□ -2.06
Trav8n-2A0A075B633 Olfr340-201ENSMUST00000072854 939 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
Trav8n-2A0A075B633 Olfr814-201ENSMUST00000081367 933 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
Trav8n-2A0A075B633 Olfr1282-201ENSMUST00000099618 918 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
Trav8n-2A0A075B633 Gm10801-201ENSMUST00000099684 504 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
Trav8n-2A0A075B633 Olfr394-202ENSMUST00000214284 5562 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
Trav8n-2A0A075B633 Gm8935-201ENSMUST00000066794 2798 ntBASIC2.19□□□□□ -2.06
Trav8n-2A0A075B633 Olfr218-202ENSMUST00000215844 3410 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
Trav8n-2A0A075B633 Gm43896-201ENSMUST00000203440 2032 ntBASIC2.18□□□□□ -2.06
Trav8n-2A0A075B633 Gm7869-201ENSMUST00000121457 1322 ntBASIC2.18□□□□□ -2.06
Trav8n-2A0A075B633 Tlr3-202ENSMUST00000167106 4093 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
Trav8n-2A0A075B633 Olfr814-202ENSMUST00000213742 3798 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
Retrieved 100 of 76,532 protein–RNA pairs in 79.5 ms