Protein–RNA interactions for Protein: A0A075B5Z8

Trav6-1, T cell receptor alpha variable 6-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-1A0A075B5Z8 4930567K20Rik-203ENSMUST00000220108 646 ntTSL 5 BASIC1.91□□□□□ -2.1
Trav6-1A0A075B5Z8 Gm19540-201ENSMUST00000221843 810 ntBASIC1.91□□□□□ -2.1
Trav6-1A0A075B5Z8 Spag11b-201ENSMUST00000039075 342 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
Trav6-1A0A075B5Z8 mt-Co2-201ENSMUST00000082405 684 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
Trav6-1A0A075B5Z8 Gm24921-201ENSMUST00000083024 107 ntBASIC1.91□□□□□ -2.1
Trav6-1A0A075B5Z8 Gm26055-201ENSMUST00000083038 107 ntBASIC1.91□□□□□ -2.1
Trav6-1A0A075B5Z8 Mir19a-201ENSMUST00000083482 82 ntBASIC1.91□□□□□ -2.1
Trav6-1A0A075B5Z8 Gm44679-201ENSMUST00000207202 2908 ntBASIC1.91□□□□□ -2.1
Trav6-1A0A075B5Z8 Olfr785-201ENSMUST00000204402 2014 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
Trav6-1A0A075B5Z8 1700017N19Rik-207ENSMUST00000190708 1945 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
Trav6-1A0A075B5Z8 Usp9y-201ENSMUST00000091188 8094 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
Trav6-1A0A075B5Z8 Zfp640-202ENSMUST00000224116 1562 ntBASIC1.9□□□□□ -2.1
Trav6-1A0A075B5Z8 Olfr794-202ENSMUST00000204820 3044 ntAPPRIS P1 TSL 2 BASIC1.9□□□□□ -2.11
Trav6-1A0A075B5Z8 Gm22115-201ENSMUST00000103976 133 ntBASIC1.9□□□□□ -2.11
Trav6-1A0A075B5Z8 Gm23923-201ENSMUST00000104108 133 ntBASIC1.9□□□□□ -2.11
Trav6-1A0A075B5Z8 Gm22591-201ENSMUST00000104243 106 ntBASIC1.9□□□□□ -2.11
Trav6-1A0A075B5Z8 Gm25728-201ENSMUST00000104525 159 ntBASIC1.9□□□□□ -2.11
Trav6-1A0A075B5Z8 Gm11784-201ENSMUST00000118568 474 ntBASIC1.9□□□□□ -2.11
Trav6-1A0A075B5Z8 Gm25945-201ENSMUST00000122484 135 ntBASIC1.9□□□□□ -2.11
Trav6-1A0A075B5Z8 Gm12238-201ENSMUST00000127764 124 ntBASIC1.9□□□□□ -2.11
Trav6-1A0A075B5Z8 Gm2020-201ENSMUST00000145242 579 ntBASIC1.9□□□□□ -2.11
Trav6-1A0A075B5Z8 Gm16510-201ENSMUST00000153501 249 ntBASIC1.9□□□□□ -2.11
Trav6-1A0A075B5Z8 Gm25283-201ENSMUST00000157272 77 ntBASIC1.9□□□□□ -2.11
Trav6-1A0A075B5Z8 Gm22766-201ENSMUST00000158372 99 ntBASIC1.9□□□□□ -2.11
Trav6-1A0A075B5Z8 Gm25413-201ENSMUST00000158544 312 ntBASIC1.9□□□□□ -2.11
Trav6-1A0A075B5Z8 Gm18358-201ENSMUST00000173179 1277 ntBASIC1.9□□□□□ -2.11
Trav6-1A0A075B5Z8 Vmn2r-ps70-201ENSMUST00000174636 302 ntBASIC1.9□□□□□ -2.11
Trav6-1A0A075B5Z8 Mir5129-201ENSMUST00000174938 78 ntBASIC1.9□□□□□ -2.11
Trav6-1A0A075B5Z8 Mir5136-201ENSMUST00000175573 76 ntBASIC1.9□□□□□ -2.11
Trav6-1A0A075B5Z8 Gm8220-203ENSMUST00000177877 381 ntTSL 5 BASIC1.9□□□□□ -2.11
Trav6-1A0A075B5Z8 Gm21028-201ENSMUST00000179470 123 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
Trav6-1A0A075B5Z8 Mir7013-201ENSMUST00000183540 72 ntBASIC1.9□□□□□ -2.11
Trav6-1A0A075B5Z8 Mir6541-201ENSMUST00000183649 110 ntBASIC1.9□□□□□ -2.11
Trav6-1A0A075B5Z8 Ranbp2-ps8-201ENSMUST00000183723 345 ntBASIC1.9□□□□□ -2.11
Trav6-1A0A075B5Z8 Gm38316-201ENSMUST00000194838 469 ntTSL 5 BASIC1.9□□□□□ -2.11
Trav6-1A0A075B5Z8 Gm31415-201ENSMUST00000194963 344 ntTSL 5 BASIC1.9□□□□□ -2.11
Trav6-1A0A075B5Z8 Gm18551-201ENSMUST00000195594 642 ntBASIC1.9□□□□□ -2.11
Trav6-1A0A075B5Z8 Gm43652-201ENSMUST00000196219 675 ntBASIC1.9□□□□□ -2.11
Trav6-1A0A075B5Z8 Gm44526-201ENSMUST00000204664 121 ntBASIC1.9□□□□□ -2.11
Trav6-1A0A075B5Z8 Gm36816-202ENSMUST00000205197 504 ntTSL 5 BASIC1.9□□□□□ -2.11
Trav6-1A0A075B5Z8 Gm36159-201ENSMUST00000206737 549 ntTSL 3 BASIC1.9□□□□□ -2.11
Trav6-1A0A075B5Z8 Gm46193-201ENSMUST00000219399 364 ntBASIC1.9□□□□□ -2.11
Trav6-1A0A075B5Z8 Tas2r107-201ENSMUST00000065781 1032 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
Trav6-1A0A075B5Z8 Olfr895-201ENSMUST00000093864 951 ntBASIC1.9□□□□□ -2.11
Trav6-1A0A075B5Z8 Olfr1040-201ENSMUST00000099909 942 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
Trav6-1A0A075B5Z8 Olfr937-202ENSMUST00000215049 2259 ntAPPRIS P1 TSL 3 BASIC1.9□□□□□ -2.11
Trav6-1A0A075B5Z8 Gm43924-201ENSMUST00000204851 1736 ntBASIC1.9□□□□□ -2.11
Trav6-1A0A075B5Z8 Zfp979-201ENSMUST00000037565 2558 ntAPPRIS P1 TSL 2 BASIC1.9□□□□□ -2.11
Trav6-1A0A075B5Z8 Gpr174-207ENSMUST00000178838 4955 ntAPPRIS P1 TSL 2 BASIC1.89□□□□□ -2.11
Trav6-1A0A075B5Z8 Gm25088-201ENSMUST00000101803 79 ntBASIC1.89□□□□□ -2.11
Trav6-1A0A075B5Z8 Mir682-201ENSMUST00000102281 96 ntBASIC1.89□□□□□ -2.11
Trav6-1A0A075B5Z8 4933413L06Rik-202ENSMUST00000111588 922 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
Trav6-1A0A075B5Z8 Gm12697-201ENSMUST00000118008 667 ntBASIC1.89□□□□□ -2.11
Trav6-1A0A075B5Z8 Gm11813-201ENSMUST00000118586 291 ntBASIC1.89□□□□□ -2.11
Trav6-1A0A075B5Z8 Gm11321-201ENSMUST00000121257 902 ntBASIC1.89□□□□□ -2.11
Trav6-1A0A075B5Z8 Gm14411-201ENSMUST00000121798 914 ntBASIC1.89□□□□□ -2.11
Trav6-1A0A075B5Z8 Gm12045-201ENSMUST00000122122 573 ntBASIC1.89□□□□□ -2.11
Trav6-1A0A075B5Z8 Gm12443-201ENSMUST00000122308 323 ntBASIC1.89□□□□□ -2.11
Trav6-1A0A075B5Z8 n-R5s216-201ENSMUST00000122755 112 ntBASIC1.89□□□□□ -2.11
Trav6-1A0A075B5Z8 Sycp3-203ENSMUST00000125612 1169 ntAPPRIS ALT2 TSL 1 (best) BASIC1.89□□□□□ -2.11
Trav6-1A0A075B5Z8 1700036O09Rik-201ENSMUST00000136834 349 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
Trav6-1A0A075B5Z8 Gm43191-201ENSMUST00000140672 704 ntAPPRIS P1 TSL 3 BASIC1.89□□□□□ -2.11
Trav6-1A0A075B5Z8 Zfp950-205ENSMUST00000148569 192 ntTSL 5 BASIC1.89□□□□□ -2.11
Trav6-1A0A075B5Z8 Gm22083-201ENSMUST00000157586 102 ntBASIC1.89□□□□□ -2.11
Trav6-1A0A075B5Z8 Gm3470-201ENSMUST00000160819 420 ntBASIC1.89□□□□□ -2.11
Trav6-1A0A075B5Z8 Gm16588-201ENSMUST00000162889 355 ntBASIC1.89□□□□□ -2.11
Trav6-1A0A075B5Z8 Gm17186-201ENSMUST00000171742 456 ntBASIC1.89□□□□□ -2.11
Trav6-1A0A075B5Z8 Mir3066-201ENSMUST00000175296 83 ntBASIC1.89□□□□□ -2.11
Trav6-1A0A075B5Z8 Gm26779-201ENSMUST00000181101 551 ntTSL 2 BASIC1.89□□□□□ -2.11
Trav6-1A0A075B5Z8 Anks1b-207ENSMUST00000182045 544 ntTSL 3 BASIC1.89□□□□□ -2.11
Trav6-1A0A075B5Z8 Gm27379-201ENSMUST00000183730 123 ntBASIC1.89□□□□□ -2.11
Trav6-1A0A075B5Z8 Gtpbp4-ps2-201ENSMUST00000184058 256 ntBASIC1.89□□□□□ -2.11
Trav6-1A0A075B5Z8 Mir8106-201ENSMUST00000184520 139 ntBASIC1.89□□□□□ -2.11
Trav6-1A0A075B5Z8 Gm29640-201ENSMUST00000187972 278 ntBASIC1.89□□□□□ -2.11
Trav6-1A0A075B5Z8 1700022E09Rik-202ENSMUST00000188342 387 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
Trav6-1A0A075B5Z8 Gm28986-201ENSMUST00000189682 678 ntTSL 5 BASIC1.89□□□□□ -2.11
Trav6-1A0A075B5Z8 Gm29192-201ENSMUST00000190942 377 ntBASIC1.89□□□□□ -2.11
Trav6-1A0A075B5Z8 Gm37059-201ENSMUST00000191723 678 ntTSL 5 BASIC1.89□□□□□ -2.11
Trav6-1A0A075B5Z8 Gm38044-201ENSMUST00000192964 487 ntBASIC1.89□□□□□ -2.11
Trav6-1A0A075B5Z8 Igkv2-105-201ENSMUST00000196931 377 ntBASIC1.89□□□□□ -2.11
Trav6-1A0A075B5Z8 Gm34599-201ENSMUST00000198924 288 ntTSL 3 BASIC1.89□□□□□ -2.11
Trav6-1A0A075B5Z8 Gm8041-201ENSMUST00000199755 616 ntBASIC1.89□□□□□ -2.11
Trav6-1A0A075B5Z8 Gm43171-201ENSMUST00000199882 291 ntBASIC1.89□□□□□ -2.11
Trav6-1A0A075B5Z8 Gm43232-201ENSMUST00000201346 364 ntBASIC1.89□□□□□ -2.11
Trav6-1A0A075B5Z8 Gm35386-201ENSMUST00000204603 629 ntTSL 3 BASIC1.89□□□□□ -2.11
Trav6-1A0A075B5Z8 AC139754.1-201ENSMUST00000219418 950 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
Trav6-1A0A075B5Z8 CR974485.1-201ENSMUST00000222408 402 ntBASIC1.89□□□□□ -2.11
Trav6-1A0A075B5Z8 AC165146.1-201ENSMUST00000223777 900 ntBASIC1.89□□□□□ -2.11
Trav6-1A0A075B5Z8 AC241593.1-201ENSMUST00000224768 397 ntBASIC1.89□□□□□ -2.11
Trav6-1A0A075B5Z8 AC161572.1-201ENSMUST00000227486 640 ntBASIC1.89□□□□□ -2.11
Trav6-1A0A075B5Z8 Mir16-2-201ENSMUST00000083672 95 ntBASIC1.89□□□□□ -2.11
Trav6-1A0A075B5Z8 AF357428-201ENSMUST00000083815 69 ntBASIC1.89□□□□□ -2.11
Trav6-1A0A075B5Z8 Gm10203-201ENSMUST00000087348 198 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
Trav6-1A0A075B5Z8 Gm42659-201ENSMUST00000196955 1754 ntBASIC1.89□□□□□ -2.11
Trav6-1A0A075B5Z8 AC162910.1-201ENSMUST00000221219 1723 ntBASIC1.88□□□□□ -2.11
Trav6-1A0A075B5Z8 C030005K15Rik-201ENSMUST00000166373 1882 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
Trav6-1A0A075B5Z8 Gm7173-202ENSMUST00000114021 1083 ntAPPRIS ALT2 TSL 5 BASIC1.88□□□□□ -2.11
Trav6-1A0A075B5Z8 Gm15282-201ENSMUST00000117707 300 ntBASIC1.88□□□□□ -2.11
Trav6-1A0A075B5Z8 Sult2a-ps4-201ENSMUST00000121421 386 ntBASIC1.88□□□□□ -2.11
Trav6-1A0A075B5Z8 Spink2-203ENSMUST00000121825 643 ntAPPRIS ALT2 TSL 3 BASIC1.88□□□□□ -2.11
Retrieved 100 of 76,532 protein–RNA pairs in 96.2 ms