Protein–RNA interactions for Protein: A0A075B5Z4

Trav1, T cell receptor alpha variable 1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav1A0A075B5Z4 Gm25360-201ENSMUST00000178786 191 ntBASIC2.59□□□□□ -1.99
Trav1A0A075B5Z4 Gm4479-201ENSMUST00000178807 171 ntBASIC2.59□□□□□ -1.99
Trav1A0A075B5Z4 Gm29413-201ENSMUST00000186019 880 ntBASIC2.59□□□□□ -1.99
Trav1A0A075B5Z4 Gm28870-201ENSMUST00000187033 880 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
Trav1A0A075B5Z4 Gm29639-201ENSMUST00000188375 580 ntBASIC2.59□□□□□ -1.99
Trav1A0A075B5Z4 Gm37869-201ENSMUST00000193385 595 ntBASIC2.59□□□□□ -1.99
Trav1A0A075B5Z4 Gm19620-201ENSMUST00000195972 434 ntBASIC2.59□□□□□ -1.99
Trav1A0A075B5Z4 Gm43804-201ENSMUST00000198280 456 ntBASIC2.59□□□□□ -1.99
Trav1A0A075B5Z4 Gm19244-201ENSMUST00000204340 253 ntBASIC2.59□□□□□ -1.99
Trav1A0A075B5Z4 Gm7675-201ENSMUST00000208828 686 ntBASIC2.59□□□□□ -1.99
Trav1A0A075B5Z4 Gm45380-201ENSMUST00000210465 315 ntBASIC2.59□□□□□ -1.99
Trav1A0A075B5Z4 Gm45240-201ENSMUST00000211437 674 ntBASIC2.59□□□□□ -1.99
Trav1A0A075B5Z4 Olfr962-ps1-201ENSMUST00000217332 442 ntBASIC2.59□□□□□ -1.99
Trav1A0A075B5Z4 4930555G07Rik-202ENSMUST00000219879 750 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
Trav1A0A075B5Z4 Gm46367-202ENSMUST00000222771 501 ntTSL 5 BASIC2.59□□□□□ -1.99
Trav1A0A075B5Z4 CT030662.1-201ENSMUST00000227380 232 ntBASIC2.59□□□□□ -1.99
Trav1A0A075B5Z4 Olfr474-201ENSMUST00000054434 933 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
Trav1A0A075B5Z4 Gm23297-201ENSMUST00000083184 127 ntBASIC2.59□□□□□ -1.99
Trav1A0A075B5Z4 Gm23848-201ENSMUST00000083826 106 ntBASIC2.59□□□□□ -1.99
Trav1A0A075B5Z4 Vmn2r-ps69-201ENSMUST00000173382 2565 ntBASIC2.59□□□□□ -1.99
Trav1A0A075B5Z4 Ms4a14-201ENSMUST00000187467 4065 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -2
Trav1A0A075B5Z4 Gm32693-201ENSMUST00000196538 2402 ntTSL 1 (best) BASIC2.59□□□□□ -2
Trav1A0A075B5Z4 Muc16-204ENSMUST00000208663 25437 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Trav1A0A075B5Z4 Gm44842-201ENSMUST00000209173 3372 ntBASIC2.58□□□□□ -2
Trav1A0A075B5Z4 Gm2093-201ENSMUST00000180518 3526 ntTSL 1 (best) BASIC2.58□□□□□ -2
Trav1A0A075B5Z4 Gm14415-201ENSMUST00000118260 1578 ntBASIC2.58□□□□□ -2
Trav1A0A075B5Z4 Zfp985-201ENSMUST00000081742 2762 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Trav1A0A075B5Z4 Zbtb41-201ENSMUST00000039867 8361 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Trav1A0A075B5Z4 Olfr1111-202ENSMUST00000214492 1616 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Trav1A0A075B5Z4 Olfr844-202ENSMUST00000220268 1686 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Trav1A0A075B5Z4 Mir92b-201ENSMUST00000102300 83 ntBASIC2.58□□□□□ -2
Trav1A0A075B5Z4 Gm25308-201ENSMUST00000104171 158 ntBASIC2.58□□□□□ -2
Trav1A0A075B5Z4 Gm12268-201ENSMUST00000118398 442 ntBASIC2.58□□□□□ -2
Trav1A0A075B5Z4 Dnaic1-202ENSMUST00000119127 500 ntTSL 1 (best) BASIC2.58□□□□□ -2
Trav1A0A075B5Z4 Gm13804-201ENSMUST00000119552 172 ntBASIC2.58□□□□□ -2
Trav1A0A075B5Z4 Gm14564-201ENSMUST00000122159 294 ntBASIC2.58□□□□□ -2
Trav1A0A075B5Z4 Gm12368-201ENSMUST00000122251 434 ntBASIC2.58□□□□□ -2
Trav1A0A075B5Z4 Gm15671-201ENSMUST00000124160 576 ntTSL 5 BASIC2.58□□□□□ -2
Trav1A0A075B5Z4 Gm28039-201ENSMUST00000149128 254 ntTSL 3 BASIC2.58□□□□□ -2
Trav1A0A075B5Z4 Gm15969-201ENSMUST00000151967 236 ntTSL 3 BASIC2.58□□□□□ -2
Trav1A0A075B5Z4 Gm22563-201ENSMUST00000157333 269 ntBASIC2.58□□□□□ -2
Trav1A0A075B5Z4 Gm22849-201ENSMUST00000157713 307 ntBASIC2.58□□□□□ -2
Trav1A0A075B5Z4 Gm23380-201ENSMUST00000158448 103 ntBASIC2.58□□□□□ -2
Trav1A0A075B5Z4 Gm24681-201ENSMUST00000158760 107 ntBASIC2.58□□□□□ -2
Trav1A0A075B5Z4 Gm25163-201ENSMUST00000158905 104 ntBASIC2.58□□□□□ -2
Trav1A0A075B5Z4 Mir5129-201ENSMUST00000174938 78 ntBASIC2.58□□□□□ -2
Trav1A0A075B5Z4 Gm27539-201ENSMUST00000184971 224 ntBASIC2.58□□□□□ -2
Trav1A0A075B5Z4 Gm18403-201ENSMUST00000192907 529 ntBASIC2.58□□□□□ -2
Trav1A0A075B5Z4 Fabp9-203ENSMUST00000193487 486 ntTSL 3 BASIC2.58□□□□□ -2
Trav1A0A075B5Z4 Nras-ps2-201ENSMUST00000195269 178 ntBASIC2.58□□□□□ -2
Trav1A0A075B5Z4 Gm43614-201ENSMUST00000197030 517 ntTSL 2 BASIC2.58□□□□□ -2
Trav1A0A075B5Z4 Gm43708-201ENSMUST00000198857 961 ntBASIC2.58□□□□□ -2
Trav1A0A075B5Z4 Gm42665-201ENSMUST00000202100 586 ntBASIC2.58□□□□□ -2
Trav1A0A075B5Z4 Gm44072-201ENSMUST00000203666 383 ntTSL 3 BASIC2.58□□□□□ -2
Trav1A0A075B5Z4 Gm18540-201ENSMUST00000204025 526 ntBASIC2.58□□□□□ -2
Trav1A0A075B5Z4 Gm2676-201ENSMUST00000207279 606 ntBASIC2.58□□□□□ -2
Trav1A0A075B5Z4 Gm9712-201ENSMUST00000210842 311 ntBASIC2.58□□□□□ -2
Trav1A0A075B5Z4 AC123656.2-201ENSMUST00000226726 227 ntBASIC2.58□□□□□ -2
Trav1A0A075B5Z4 AC122341.1-201ENSMUST00000227291 560 ntBASIC2.58□□□□□ -2
Trav1A0A075B5Z4 AC144628.1-201ENSMUST00000227943 466 ntBASIC2.58□□□□□ -2
Trav1A0A075B5Z4 Gm23097-201ENSMUST00000083448 105 ntBASIC2.58□□□□□ -2
Trav1A0A075B5Z4 Gm5670-201ENSMUST00000093546 372 ntBASIC2.58□□□□□ -2
Trav1A0A075B5Z4 Olfr1282-201ENSMUST00000099618 918 ntAPPRIS P1 BASIC2.58□□□□□ -2
Trav1A0A075B5Z4 Gm3956-201ENSMUST00000164882 2560 ntBASIC2.58□□□□□ -2
Trav1A0A075B5Z4 Vmn2r-ps46-201ENSMUST00000172969 2556 ntBASIC2.58□□□□□ -2
Trav1A0A075B5Z4 Olfr872-201ENSMUST00000086474 1897 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
Trav1A0A075B5Z4 Olfr837-202ENSMUST00000215699 3758 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Trav1A0A075B5Z4 Olfr109-203ENSMUST00000214938 5550 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Trav1A0A075B5Z4 Olfr839-ps1-201ENSMUST00000212127 7759 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Trav1A0A075B5Z4 Gm11577-201ENSMUST00000118030 737 ntBASIC2.57□□□□□ -2
Trav1A0A075B5Z4 Olfr1144-ps1-201ENSMUST00000118227 328 ntBASIC2.57□□□□□ -2
Trav1A0A075B5Z4 Gm12433-201ENSMUST00000119659 255 ntBASIC2.57□□□□□ -2
Trav1A0A075B5Z4 Gm25807-201ENSMUST00000122783 305 ntBASIC2.57□□□□□ -2
Trav1A0A075B5Z4 Gm15561-201ENSMUST00000124326 540 ntTSL 3 BASIC2.57□□□□□ -2
Trav1A0A075B5Z4 A130030D18Rik-201ENSMUST00000128608 654 ntTSL 1 (best) BASIC2.57□□□□□ -2
Trav1A0A075B5Z4 Gm23078-201ENSMUST00000157848 148 ntBASIC2.57□□□□□ -2
Trav1A0A075B5Z4 Gm24439-201ENSMUST00000157894 117 ntBASIC2.57□□□□□ -2
Trav1A0A075B5Z4 Vmn2r-ps70-201ENSMUST00000174636 302 ntBASIC2.57□□□□□ -2
Trav1A0A075B5Z4 Gm24713-201ENSMUST00000178850 107 ntBASIC2.57□□□□□ -2
Trav1A0A075B5Z4 Gm21758-201ENSMUST00000179336 819 ntBASIC2.57□□□□□ -2
Trav1A0A075B5Z4 Gm25448-201ENSMUST00000180065 107 ntBASIC2.57□□□□□ -2
Trav1A0A075B5Z4 Ifi213-205ENSMUST00000180215 643 ntAPPRIS P2 TSL 3 BASIC2.57□□□□□ -2
Trav1A0A075B5Z4 Gm23144-201ENSMUST00000180226 107 ntBASIC2.57□□□□□ -2
Trav1A0A075B5Z4 Gm19257-201ENSMUST00000186121 183 ntBASIC2.57□□□□□ -2
Trav1A0A075B5Z4 Gm17946-201ENSMUST00000186856 538 ntBASIC2.57□□□□□ -2
Trav1A0A075B5Z4 Gm10193-201ENSMUST00000188288 231 ntBASIC2.57□□□□□ -2
Trav1A0A075B5Z4 Gm20832-201ENSMUST00000189076 665 ntBASIC2.57□□□□□ -2
Trav1A0A075B5Z4 Gm28241-201ENSMUST00000190916 235 ntBASIC2.57□□□□□ -2
Trav1A0A075B5Z4 Gm31511-201ENSMUST00000193134 657 ntBASIC2.57□□□□□ -2
Trav1A0A075B5Z4 Gm30638-201ENSMUST00000195570 656 ntBASIC2.57□□□□□ -2
Trav1A0A075B5Z4 Gm36728-201ENSMUST00000195782 665 ntBASIC2.57□□□□□ -2
Trav1A0A075B5Z4 Gm9236-201ENSMUST00000196892 587 ntBASIC2.57□□□□□ -2
Trav1A0A075B5Z4 Gtpbp4-ps6-201ENSMUST00000198160 292 ntBASIC2.57□□□□□ -2
Trav1A0A075B5Z4 Gm44391-201ENSMUST00000198490 93 ntBASIC2.57□□□□□ -2
Trav1A0A075B5Z4 Gm43217-201ENSMUST00000199513 367 ntBASIC2.57□□□□□ -2
Trav1A0A075B5Z4 Gm45438-201ENSMUST00000210242 564 ntBASIC2.57□□□□□ -2
Trav1A0A075B5Z4 AC168266.1-201ENSMUST00000216024 226 ntBASIC2.57□□□□□ -2
Trav1A0A075B5Z4 Olfr1543-ps1-201ENSMUST00000217448 908 ntBASIC2.57□□□□□ -2
Trav1A0A075B5Z4 Gm9818-201ENSMUST00000050900 255 ntBASIC2.57□□□□□ -2
Trav1A0A075B5Z4 Olfr823-201ENSMUST00000081469 948 ntAPPRIS P1 BASIC2.57□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 86.9 ms