Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC17.15■□□□□ 0.34
H2afb2S4R1M3 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
H2afb2S4R1M3 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
H2afb2S4R1M3 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
H2afb2S4R1M3 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
H2afb2S4R1M3 Mir1199-201ENSMUST00000117015 119 ntBASIC17.15■□□□□ 0.34
H2afb2S4R1M3 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
H2afb2S4R1M3 AC175538.1-201ENSMUST00000225343 1269 ntBASIC17.15■□□□□ 0.34
H2afb2S4R1M3 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
H2afb2S4R1M3 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
H2afb2S4R1M3 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
H2afb2S4R1M3 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
H2afb2S4R1M3 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC17.15■□□□□ 0.34
H2afb2S4R1M3 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
H2afb2S4R1M3 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
H2afb2S4R1M3 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
H2afb2S4R1M3 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
H2afb2S4R1M3 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
H2afb2S4R1M3 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
H2afb2S4R1M3 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
H2afb2S4R1M3 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
H2afb2S4R1M3 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.34
H2afb2S4R1M3 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
H2afb2S4R1M3 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
H2afb2S4R1M3 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
H2afb2S4R1M3 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
H2afb2S4R1M3 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
H2afb2S4R1M3 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
H2afb2S4R1M3 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
H2afb2S4R1M3 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
H2afb2S4R1M3 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
H2afb2S4R1M3 Gm37025-201ENSMUST00000195159 829 ntBASIC17.14■□□□□ 0.33
H2afb2S4R1M3 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC17.14■□□□□ 0.33
H2afb2S4R1M3 AC153881.1-201ENSMUST00000214448 284 ntBASIC17.14■□□□□ 0.33
H2afb2S4R1M3 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
H2afb2S4R1M3 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
H2afb2S4R1M3 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
H2afb2S4R1M3 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC17.14■□□□□ 0.33
H2afb2S4R1M3 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC17.14■□□□□ 0.33
H2afb2S4R1M3 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
H2afb2S4R1M3 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
H2afb2S4R1M3 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
H2afb2S4R1M3 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
H2afb2S4R1M3 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
H2afb2S4R1M3 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
H2afb2S4R1M3 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
H2afb2S4R1M3 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
H2afb2S4R1M3 Gm12085-201ENSMUST00000119263 940 ntBASIC17.13■□□□□ 0.33
H2afb2S4R1M3 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
H2afb2S4R1M3 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
H2afb2S4R1M3 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
H2afb2S4R1M3 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
H2afb2S4R1M3 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
H2afb2S4R1M3 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
H2afb2S4R1M3 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
H2afb2S4R1M3 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
H2afb2S4R1M3 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
H2afb2S4R1M3 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
H2afb2S4R1M3 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
H2afb2S4R1M3 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
H2afb2S4R1M3 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC17.12■□□□□ 0.33
H2afb2S4R1M3 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
H2afb2S4R1M3 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
H2afb2S4R1M3 Tfap2a-209ENSMUST00000225180 1828 ntBASIC17.12■□□□□ 0.33
H2afb2S4R1M3 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
H2afb2S4R1M3 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
H2afb2S4R1M3 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
H2afb2S4R1M3 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
H2afb2S4R1M3 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
H2afb2S4R1M3 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
H2afb2S4R1M3 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
H2afb2S4R1M3 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
H2afb2S4R1M3 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
H2afb2S4R1M3 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
H2afb2S4R1M3 Gm22240-201ENSMUST00000175225 82 ntBASIC17.12■□□□□ 0.33
H2afb2S4R1M3 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
H2afb2S4R1M3 Gm27011-201ENSMUST00000182352 972 ntBASIC17.12■□□□□ 0.33
H2afb2S4R1M3 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC17.12■□□□□ 0.33
H2afb2S4R1M3 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
H2afb2S4R1M3 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
H2afb2S4R1M3 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
H2afb2S4R1M3 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
H2afb2S4R1M3 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
H2afb2S4R1M3 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC17.12■□□□□ 0.33
H2afb2S4R1M3 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
H2afb2S4R1M3 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
H2afb2S4R1M3 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
H2afb2S4R1M3 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
H2afb2S4R1M3 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
H2afb2S4R1M3 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
H2afb2S4R1M3 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
H2afb2S4R1M3 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC17.11■□□□□ 0.33
H2afb2S4R1M3 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
H2afb2S4R1M3 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
H2afb2S4R1M3 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
H2afb2S4R1M3 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
H2afb2S4R1M3 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
H2afb2S4R1M3 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC17.11■□□□□ 0.33
H2afb2S4R1M3 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
H2afb2S4R1M3 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms