Protein–RNA interactions for Protein: Q9Z2L7

Crlf3, Cytokine receptor-like factor 3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crlf3Q9Z2L7 Mir5133-201ENSMUST00000174955 77 ntBASIC17.37■□□□□ 0.37
Crlf3Q9Z2L7 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Crlf3Q9Z2L7 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Crlf3Q9Z2L7 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Crlf3Q9Z2L7 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Crlf3Q9Z2L7 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Crlf3Q9Z2L7 Gm20628-201ENSMUST00000177363 3215 ntBASIC17.37■□□□□ 0.37
Crlf3Q9Z2L7 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Crlf3Q9Z2L7 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Crlf3Q9Z2L7 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Crlf3Q9Z2L7 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Crlf3Q9Z2L7 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Crlf3Q9Z2L7 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Crlf3Q9Z2L7 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
Crlf3Q9Z2L7 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Crlf3Q9Z2L7 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Crlf3Q9Z2L7 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Crlf3Q9Z2L7 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Crlf3Q9Z2L7 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Crlf3Q9Z2L7 Gm37166-201ENSMUST00000195473 2474 ntBASIC17.36■□□□□ 0.37
Crlf3Q9Z2L7 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Crlf3Q9Z2L7 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Crlf3Q9Z2L7 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Crlf3Q9Z2L7 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Crlf3Q9Z2L7 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Crlf3Q9Z2L7 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Crlf3Q9Z2L7 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Crlf3Q9Z2L7 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
Crlf3Q9Z2L7 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC17.35■□□□□ 0.37
Crlf3Q9Z2L7 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC17.35■□□□□ 0.37
Crlf3Q9Z2L7 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Crlf3Q9Z2L7 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
Crlf3Q9Z2L7 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Crlf3Q9Z2L7 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Crlf3Q9Z2L7 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Crlf3Q9Z2L7 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Crlf3Q9Z2L7 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Crlf3Q9Z2L7 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC17.35■□□□□ 0.37
Crlf3Q9Z2L7 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Crlf3Q9Z2L7 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Crlf3Q9Z2L7 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Crlf3Q9Z2L7 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Crlf3Q9Z2L7 Gm27011-201ENSMUST00000182352 972 ntBASIC17.34■□□□□ 0.37
Crlf3Q9Z2L7 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC17.34■□□□□ 0.37
Crlf3Q9Z2L7 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Crlf3Q9Z2L7 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Crlf3Q9Z2L7 AC108858.1-201ENSMUST00000228461 1498 ntBASIC17.34■□□□□ 0.37
Crlf3Q9Z2L7 AC112142.1-201ENSMUST00000228796 918 ntBASIC17.34■□□□□ 0.37
Crlf3Q9Z2L7 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Crlf3Q9Z2L7 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Crlf3Q9Z2L7 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Crlf3Q9Z2L7 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Crlf3Q9Z2L7 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Crlf3Q9Z2L7 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Crlf3Q9Z2L7 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Crlf3Q9Z2L7 Gm16499-203ENSMUST00000204633 2177 ntBASIC17.33■□□□□ 0.37
Crlf3Q9Z2L7 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
Crlf3Q9Z2L7 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Crlf3Q9Z2L7 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Crlf3Q9Z2L7 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Crlf3Q9Z2L7 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Crlf3Q9Z2L7 Gm43272-201ENSMUST00000200599 1584 ntBASIC17.33■□□□□ 0.37
Crlf3Q9Z2L7 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC17.33■□□□□ 0.37
Crlf3Q9Z2L7 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Crlf3Q9Z2L7 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Crlf3Q9Z2L7 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Crlf3Q9Z2L7 Gm10418-201ENSMUST00000100943 576 ntBASIC17.33■□□□□ 0.36
Crlf3Q9Z2L7 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Crlf3Q9Z2L7 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC17.33■□□□□ 0.36
Crlf3Q9Z2L7 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Crlf3Q9Z2L7 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Crlf3Q9Z2L7 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC17.33■□□□□ 0.36
Crlf3Q9Z2L7 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC17.33■□□□□ 0.36
Crlf3Q9Z2L7 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Crlf3Q9Z2L7 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Crlf3Q9Z2L7 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Crlf3Q9Z2L7 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Crlf3Q9Z2L7 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Crlf3Q9Z2L7 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Crlf3Q9Z2L7 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Crlf3Q9Z2L7 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Crlf3Q9Z2L7 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Crlf3Q9Z2L7 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC17.33■□□□□ 0.36
Crlf3Q9Z2L7 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Crlf3Q9Z2L7 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC17.33■□□□□ 0.36
Crlf3Q9Z2L7 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Crlf3Q9Z2L7 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Crlf3Q9Z2L7 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Crlf3Q9Z2L7 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Crlf3Q9Z2L7 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Crlf3Q9Z2L7 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Crlf3Q9Z2L7 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC17.32■□□□□ 0.36
Crlf3Q9Z2L7 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Crlf3Q9Z2L7 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Crlf3Q9Z2L7 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Crlf3Q9Z2L7 Gm26596-201ENSMUST00000180464 2655 ntBASIC17.32■□□□□ 0.36
Crlf3Q9Z2L7 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Crlf3Q9Z2L7 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC17.32■□□□□ 0.36
Crlf3Q9Z2L7 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC17.32■□□□□ 0.36
Crlf3Q9Z2L7 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms