Protein–RNA interactions for Protein: Q9Z104

Hmg20b, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmg20bQ9Z104 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Hmg20bQ9Z104 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Hmg20bQ9Z104 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Hmg20bQ9Z104 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Hmg20bQ9Z104 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Hmg20bQ9Z104 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Hmg20bQ9Z104 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Hmg20bQ9Z104 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Hmg20bQ9Z104 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Hmg20bQ9Z104 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Hmg20bQ9Z104 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
Hmg20bQ9Z104 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Hmg20bQ9Z104 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Hmg20bQ9Z104 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC20.22■□□□□ 0.83
Hmg20bQ9Z104 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Hmg20bQ9Z104 Mir5122-201ENSMUST00000175004 89 ntBASIC20.22■□□□□ 0.83
Hmg20bQ9Z104 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Hmg20bQ9Z104 Otx2os1-204ENSMUST00000227221 751 ntBASIC20.22■□□□□ 0.83
Hmg20bQ9Z104 AC112142.1-201ENSMUST00000228796 918 ntBASIC20.22■□□□□ 0.83
Hmg20bQ9Z104 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Hmg20bQ9Z104 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Hmg20bQ9Z104 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Hmg20bQ9Z104 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Hmg20bQ9Z104 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Hmg20bQ9Z104 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Hmg20bQ9Z104 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Hmg20bQ9Z104 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Hmg20bQ9Z104 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC20.21■□□□□ 0.83
Hmg20bQ9Z104 Arhgef4-208ENSMUST00000211073 171 ntBASIC20.21■□□□□ 0.83
Hmg20bQ9Z104 AC120002.2-201ENSMUST00000220205 773 ntBASIC20.21■□□□□ 0.83
Hmg20bQ9Z104 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC20.21■□□□□ 0.83
Hmg20bQ9Z104 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Hmg20bQ9Z104 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Hmg20bQ9Z104 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Hmg20bQ9Z104 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Hmg20bQ9Z104 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Hmg20bQ9Z104 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Hmg20bQ9Z104 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Hmg20bQ9Z104 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC20.2■□□□□ 0.82
Hmg20bQ9Z104 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Hmg20bQ9Z104 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Hmg20bQ9Z104 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Hmg20bQ9Z104 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Hmg20bQ9Z104 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC20.2■□□□□ 0.82
Hmg20bQ9Z104 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Hmg20bQ9Z104 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC20.2■□□□□ 0.82
Hmg20bQ9Z104 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Hmg20bQ9Z104 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Hmg20bQ9Z104 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Hmg20bQ9Z104 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Hmg20bQ9Z104 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Hmg20bQ9Z104 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Hmg20bQ9Z104 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Hmg20bQ9Z104 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Hmg20bQ9Z104 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Hmg20bQ9Z104 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Hmg20bQ9Z104 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC20.19■□□□□ 0.82
Hmg20bQ9Z104 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC20.19■□□□□ 0.82
Hmg20bQ9Z104 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Hmg20bQ9Z104 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Hmg20bQ9Z104 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC20.19■□□□□ 0.82
Hmg20bQ9Z104 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Hmg20bQ9Z104 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Hmg20bQ9Z104 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Hmg20bQ9Z104 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Hmg20bQ9Z104 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Hmg20bQ9Z104 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Hmg20bQ9Z104 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Hmg20bQ9Z104 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Hmg20bQ9Z104 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Hmg20bQ9Z104 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Hmg20bQ9Z104 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Hmg20bQ9Z104 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Hmg20bQ9Z104 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC20.18■□□□□ 0.82
Hmg20bQ9Z104 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Hmg20bQ9Z104 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Hmg20bQ9Z104 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Hmg20bQ9Z104 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Hmg20bQ9Z104 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Hmg20bQ9Z104 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Hmg20bQ9Z104 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Hmg20bQ9Z104 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Hmg20bQ9Z104 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Hmg20bQ9Z104 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Hmg20bQ9Z104 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Hmg20bQ9Z104 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Hmg20bQ9Z104 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Hmg20bQ9Z104 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC20.17■□□□□ 0.82
Hmg20bQ9Z104 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC20.17■□□□□ 0.82
Hmg20bQ9Z104 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
Hmg20bQ9Z104 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Hmg20bQ9Z104 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC20.17■□□□□ 0.82
Hmg20bQ9Z104 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Hmg20bQ9Z104 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Hmg20bQ9Z104 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Hmg20bQ9Z104 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Hmg20bQ9Z104 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Hmg20bQ9Z104 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC20.17■□□□□ 0.82
Hmg20bQ9Z104 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Hmg20bQ9Z104 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms