Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smarcb1Q9Z0H3 Gm14859-201ENSMUST00000117752 357 ntBASIC17.79■□□□□ 0.44
Smarcb1Q9Z0H3 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Smarcb1Q9Z0H3 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Smarcb1Q9Z0H3 Gm3272-201ENSMUST00000181181 1229 ntBASIC17.79■□□□□ 0.44
Smarcb1Q9Z0H3 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smarcb1Q9Z0H3 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smarcb1Q9Z0H3 Gm10566-201ENSMUST00000086739 996 ntBASIC17.79■□□□□ 0.44
Smarcb1Q9Z0H3 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smarcb1Q9Z0H3 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smarcb1Q9Z0H3 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smarcb1Q9Z0H3 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Smarcb1Q9Z0H3 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smarcb1Q9Z0H3 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smarcb1Q9Z0H3 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Smarcb1Q9Z0H3 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Smarcb1Q9Z0H3 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Smarcb1Q9Z0H3 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Smarcb1Q9Z0H3 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Smarcb1Q9Z0H3 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Smarcb1Q9Z0H3 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
Smarcb1Q9Z0H3 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC17.78■□□□□ 0.44
Smarcb1Q9Z0H3 Gm27000-201ENSMUST00000182943 842 ntBASIC17.78■□□□□ 0.44
Smarcb1Q9Z0H3 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Smarcb1Q9Z0H3 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Smarcb1Q9Z0H3 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Smarcb1Q9Z0H3 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Smarcb1Q9Z0H3 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Smarcb1Q9Z0H3 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Smarcb1Q9Z0H3 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Smarcb1Q9Z0H3 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Smarcb1Q9Z0H3 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Smarcb1Q9Z0H3 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Smarcb1Q9Z0H3 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Smarcb1Q9Z0H3 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Smarcb1Q9Z0H3 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Smarcb1Q9Z0H3 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Smarcb1Q9Z0H3 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Smarcb1Q9Z0H3 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Smarcb1Q9Z0H3 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Smarcb1Q9Z0H3 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Smarcb1Q9Z0H3 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC17.77■□□□□ 0.44
Smarcb1Q9Z0H3 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC17.77■□□□□ 0.44
Smarcb1Q9Z0H3 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Smarcb1Q9Z0H3 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Smarcb1Q9Z0H3 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Smarcb1Q9Z0H3 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Smarcb1Q9Z0H3 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Smarcb1Q9Z0H3 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Smarcb1Q9Z0H3 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Smarcb1Q9Z0H3 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Smarcb1Q9Z0H3 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Smarcb1Q9Z0H3 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Smarcb1Q9Z0H3 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Smarcb1Q9Z0H3 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Smarcb1Q9Z0H3 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Smarcb1Q9Z0H3 Gm29518-201ENSMUST00000190858 372 ntBASIC17.76■□□□□ 0.43
Smarcb1Q9Z0H3 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Smarcb1Q9Z0H3 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
Smarcb1Q9Z0H3 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Smarcb1Q9Z0H3 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Smarcb1Q9Z0H3 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
Smarcb1Q9Z0H3 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC17.76■□□□□ 0.43
Smarcb1Q9Z0H3 Grk6-206ENSMUST00000224995 2971 ntBASIC17.76■□□□□ 0.43
Smarcb1Q9Z0H3 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Smarcb1Q9Z0H3 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Smarcb1Q9Z0H3 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Smarcb1Q9Z0H3 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Smarcb1Q9Z0H3 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Smarcb1Q9Z0H3 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Smarcb1Q9Z0H3 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Smarcb1Q9Z0H3 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC17.75■□□□□ 0.43
Smarcb1Q9Z0H3 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC17.75■□□□□ 0.43
Smarcb1Q9Z0H3 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC17.75■□□□□ 0.43
Smarcb1Q9Z0H3 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Smarcb1Q9Z0H3 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC17.75■□□□□ 0.43
Smarcb1Q9Z0H3 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC17.75■□□□□ 0.43
Smarcb1Q9Z0H3 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Smarcb1Q9Z0H3 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Smarcb1Q9Z0H3 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Smarcb1Q9Z0H3 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC17.75■□□□□ 0.43
Smarcb1Q9Z0H3 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Smarcb1Q9Z0H3 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Smarcb1Q9Z0H3 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC17.74■□□□□ 0.43
Smarcb1Q9Z0H3 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Smarcb1Q9Z0H3 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Smarcb1Q9Z0H3 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Smarcb1Q9Z0H3 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Smarcb1Q9Z0H3 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Smarcb1Q9Z0H3 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC17.74■□□□□ 0.43
Smarcb1Q9Z0H3 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC17.74■□□□□ 0.43
Smarcb1Q9Z0H3 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC17.74■□□□□ 0.43
Smarcb1Q9Z0H3 Gm37722-201ENSMUST00000193757 208 ntBASIC17.74■□□□□ 0.43
Smarcb1Q9Z0H3 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Smarcb1Q9Z0H3 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Smarcb1Q9Z0H3 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Smarcb1Q9Z0H3 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Smarcb1Q9Z0H3 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Smarcb1Q9Z0H3 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Smarcb1Q9Z0H3 Cxcl14-202ENSMUST00000224801 1467 ntBASIC17.74■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 66.8 ms