Protein–RNA interactions for Protein: Q9WVD4

Clcn5, H(+)/Cl(-) exchange transporter 5, mousemouse

Predictions only

Length 746 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn5Q9WVD4 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Clcn5Q9WVD4 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Clcn5Q9WVD4 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Clcn5Q9WVD4 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Clcn5Q9WVD4 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Clcn5Q9WVD4 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Clcn5Q9WVD4 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Clcn5Q9WVD4 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Clcn5Q9WVD4 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Clcn5Q9WVD4 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC17.73■□□□□ 0.43
Clcn5Q9WVD4 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Clcn5Q9WVD4 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Clcn5Q9WVD4 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Clcn5Q9WVD4 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC17.73■□□□□ 0.43
Clcn5Q9WVD4 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Clcn5Q9WVD4 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Clcn5Q9WVD4 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Clcn5Q9WVD4 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC17.73■□□□□ 0.43
Clcn5Q9WVD4 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Clcn5Q9WVD4 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Clcn5Q9WVD4 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC17.73■□□□□ 0.43
Clcn5Q9WVD4 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Clcn5Q9WVD4 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Clcn5Q9WVD4 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Clcn5Q9WVD4 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Clcn5Q9WVD4 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Clcn5Q9WVD4 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Clcn5Q9WVD4 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Clcn5Q9WVD4 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Clcn5Q9WVD4 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC17.73■□□□□ 0.43
Clcn5Q9WVD4 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Clcn5Q9WVD4 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Clcn5Q9WVD4 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Clcn5Q9WVD4 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Clcn5Q9WVD4 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Clcn5Q9WVD4 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Clcn5Q9WVD4 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Clcn5Q9WVD4 Gm4974-201ENSMUST00000209974 875 ntBASIC17.72■□□□□ 0.43
Clcn5Q9WVD4 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Clcn5Q9WVD4 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Clcn5Q9WVD4 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC17.72■□□□□ 0.43
Clcn5Q9WVD4 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Clcn5Q9WVD4 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Clcn5Q9WVD4 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Clcn5Q9WVD4 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Clcn5Q9WVD4 Zcchc6-207ENSMUST00000225576 2499 ntBASIC17.72■□□□□ 0.43
Clcn5Q9WVD4 Gm43702-201ENSMUST00000198772 2546 ntBASIC17.71■□□□□ 0.43
Clcn5Q9WVD4 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC17.71■□□□□ 0.43
Clcn5Q9WVD4 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Clcn5Q9WVD4 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Clcn5Q9WVD4 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC17.71■□□□□ 0.43
Clcn5Q9WVD4 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Clcn5Q9WVD4 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Clcn5Q9WVD4 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Clcn5Q9WVD4 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Clcn5Q9WVD4 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Clcn5Q9WVD4 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Clcn5Q9WVD4 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Clcn5Q9WVD4 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Clcn5Q9WVD4 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Clcn5Q9WVD4 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.7■□□□□ 0.42
Clcn5Q9WVD4 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Clcn5Q9WVD4 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Clcn5Q9WVD4 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Clcn5Q9WVD4 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC17.7■□□□□ 0.42
Clcn5Q9WVD4 Mir3081-201ENSMUST00000175305 84 ntBASIC17.7■□□□□ 0.42
Clcn5Q9WVD4 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Clcn5Q9WVD4 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Clcn5Q9WVD4 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC17.7■□□□□ 0.42
Clcn5Q9WVD4 Gm18115-201ENSMUST00000221209 621 ntBASIC17.7■□□□□ 0.42
Clcn5Q9WVD4 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Clcn5Q9WVD4 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Clcn5Q9WVD4 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Clcn5Q9WVD4 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Clcn5Q9WVD4 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Clcn5Q9WVD4 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC17.7■□□□□ 0.42
Clcn5Q9WVD4 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Clcn5Q9WVD4 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC17.7■□□□□ 0.42
Clcn5Q9WVD4 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Clcn5Q9WVD4 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Clcn5Q9WVD4 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC17.69■□□□□ 0.42
Clcn5Q9WVD4 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Clcn5Q9WVD4 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Clcn5Q9WVD4 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Clcn5Q9WVD4 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC17.69■□□□□ 0.42
Clcn5Q9WVD4 Gm27357-201ENSMUST00000183754 135 ntBASIC17.69■□□□□ 0.42
Clcn5Q9WVD4 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Clcn5Q9WVD4 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Clcn5Q9WVD4 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Clcn5Q9WVD4 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
Clcn5Q9WVD4 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Clcn5Q9WVD4 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Clcn5Q9WVD4 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC17.68■□□□□ 0.42
Clcn5Q9WVD4 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC17.68■□□□□ 0.42
Clcn5Q9WVD4 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
Clcn5Q9WVD4 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC17.68■□□□□ 0.42
Clcn5Q9WVD4 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Clcn5Q9WVD4 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Clcn5Q9WVD4 Gm24589-201ENSMUST00000116692 94 ntBASIC17.68■□□□□ 0.42
Clcn5Q9WVD4 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC17.68■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms