Protein–RNA interactions for Protein: Q9WUH2

Lhx9, LIM/homeobox protein Lhx9, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx9Q9WUH2 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lhx9Q9WUH2 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lhx9Q9WUH2 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
Lhx9Q9WUH2 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Lhx9Q9WUH2 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lhx9Q9WUH2 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Lhx9Q9WUH2 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Lhx9Q9WUH2 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lhx9Q9WUH2 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Lhx9Q9WUH2 Gm43294-201ENSMUST00000202850 2490 ntBASIC16.3■□□□□ 0.2
Lhx9Q9WUH2 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC16.3■□□□□ 0.2
Lhx9Q9WUH2 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lhx9Q9WUH2 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Lhx9Q9WUH2 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC16.3■□□□□ 0.2
Lhx9Q9WUH2 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Lhx9Q9WUH2 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Lhx9Q9WUH2 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Lhx9Q9WUH2 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lhx9Q9WUH2 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lhx9Q9WUH2 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lhx9Q9WUH2 Gm16061-201ENSMUST00000122167 857 ntBASIC16.3■□□□□ 0.2
Lhx9Q9WUH2 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lhx9Q9WUH2 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC16.3■□□□□ 0.2
Lhx9Q9WUH2 Gm22697-201ENSMUST00000175194 63 ntBASIC16.3■□□□□ 0.2
Lhx9Q9WUH2 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lhx9Q9WUH2 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lhx9Q9WUH2 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lhx9Q9WUH2 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lhx9Q9WUH2 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lhx9Q9WUH2 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Lhx9Q9WUH2 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lhx9Q9WUH2 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Lhx9Q9WUH2 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Lhx9Q9WUH2 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Lhx9Q9WUH2 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Lhx9Q9WUH2 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lhx9Q9WUH2 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Lhx9Q9WUH2 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lhx9Q9WUH2 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lhx9Q9WUH2 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lhx9Q9WUH2 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC16.29■□□□□ 0.2
Lhx9Q9WUH2 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC16.29■□□□□ 0.2
Lhx9Q9WUH2 Gm43338-201ENSMUST00000198617 2223 ntBASIC16.29■□□□□ 0.2
Lhx9Q9WUH2 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lhx9Q9WUH2 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lhx9Q9WUH2 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC16.29■□□□□ 0.2
Lhx9Q9WUH2 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lhx9Q9WUH2 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC16.29■□□□□ 0.2
Lhx9Q9WUH2 Gm7791-201ENSMUST00000219066 539 ntBASIC16.29■□□□□ 0.2
Lhx9Q9WUH2 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Lhx9Q9WUH2 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lhx9Q9WUH2 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lhx9Q9WUH2 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lhx9Q9WUH2 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lhx9Q9WUH2 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lhx9Q9WUH2 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Lhx9Q9WUH2 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lhx9Q9WUH2 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lhx9Q9WUH2 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lhx9Q9WUH2 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Lhx9Q9WUH2 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Lhx9Q9WUH2 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC16.28■□□□□ 0.2
Lhx9Q9WUH2 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Lhx9Q9WUH2 Gm6345-202ENSMUST00000180900 204 ntBASIC16.28■□□□□ 0.2
Lhx9Q9WUH2 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC16.28■□□□□ 0.2
Lhx9Q9WUH2 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lhx9Q9WUH2 Gm10819-201ENSMUST00000099988 561 ntBASIC16.28■□□□□ 0.2
Lhx9Q9WUH2 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lhx9Q9WUH2 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lhx9Q9WUH2 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lhx9Q9WUH2 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lhx9Q9WUH2 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lhx9Q9WUH2 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC16.28■□□□□ 0.2
Lhx9Q9WUH2 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lhx9Q9WUH2 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lhx9Q9WUH2 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lhx9Q9WUH2 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lhx9Q9WUH2 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lhx9Q9WUH2 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC16.27■□□□□ 0.2
Lhx9Q9WUH2 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lhx9Q9WUH2 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lhx9Q9WUH2 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lhx9Q9WUH2 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Lhx9Q9WUH2 Gm13474-201ENSMUST00000122466 815 ntBASIC16.27■□□□□ 0.2
Lhx9Q9WUH2 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lhx9Q9WUH2 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC16.27■□□□□ 0.2
Lhx9Q9WUH2 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Lhx9Q9WUH2 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lhx9Q9WUH2 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Lhx9Q9WUH2 Gm16499-203ENSMUST00000204633 2177 ntBASIC16.27■□□□□ 0.19
Lhx9Q9WUH2 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Lhx9Q9WUH2 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Lhx9Q9WUH2 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Lhx9Q9WUH2 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Lhx9Q9WUH2 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Lhx9Q9WUH2 Gm15635-204ENSMUST00000208024 2539 ntBASIC16.26■□□□□ 0.19
Lhx9Q9WUH2 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Lhx9Q9WUH2 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lhx9Q9WUH2 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Lhx9Q9WUH2 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms