Protein–RNA interactions for Protein: Q9QXZ7

Nr2e3, Photoreceptor-specific nuclear receptor, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr2e3Q9QXZ7 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC19.4■□□□□ 0.7
Nr2e3Q9QXZ7 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nr2e3Q9QXZ7 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Nr2e3Q9QXZ7 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nr2e3Q9QXZ7 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nr2e3Q9QXZ7 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC19.4■□□□□ 0.7
Nr2e3Q9QXZ7 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Nr2e3Q9QXZ7 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nr2e3Q9QXZ7 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nr2e3Q9QXZ7 Tfap2a-209ENSMUST00000225180 1828 ntBASIC19.39■□□□□ 0.7
Nr2e3Q9QXZ7 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nr2e3Q9QXZ7 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC19.39■□□□□ 0.69
Nr2e3Q9QXZ7 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Nr2e3Q9QXZ7 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Nr2e3Q9QXZ7 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
Nr2e3Q9QXZ7 AC153881.2-201ENSMUST00000214877 204 ntBASIC19.39■□□□□ 0.69
Nr2e3Q9QXZ7 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nr2e3Q9QXZ7 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nr2e3Q9QXZ7 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nr2e3Q9QXZ7 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC19.39■□□□□ 0.69
Nr2e3Q9QXZ7 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nr2e3Q9QXZ7 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nr2e3Q9QXZ7 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nr2e3Q9QXZ7 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Nr2e3Q9QXZ7 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Nr2e3Q9QXZ7 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Nr2e3Q9QXZ7 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
Nr2e3Q9QXZ7 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Nr2e3Q9QXZ7 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Nr2e3Q9QXZ7 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Nr2e3Q9QXZ7 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC19.38■□□□□ 0.69
Nr2e3Q9QXZ7 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Nr2e3Q9QXZ7 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Nr2e3Q9QXZ7 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Nr2e3Q9QXZ7 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Nr2e3Q9QXZ7 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Nr2e3Q9QXZ7 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Nr2e3Q9QXZ7 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Nr2e3Q9QXZ7 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Nr2e3Q9QXZ7 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC19.38■□□□□ 0.69
Nr2e3Q9QXZ7 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nr2e3Q9QXZ7 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nr2e3Q9QXZ7 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nr2e3Q9QXZ7 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nr2e3Q9QXZ7 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nr2e3Q9QXZ7 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Nr2e3Q9QXZ7 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nr2e3Q9QXZ7 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Nr2e3Q9QXZ7 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nr2e3Q9QXZ7 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Nr2e3Q9QXZ7 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nr2e3Q9QXZ7 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nr2e3Q9QXZ7 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nr2e3Q9QXZ7 Gm42900-201ENSMUST00000197184 2167 ntBASIC19.37■□□□□ 0.69
Nr2e3Q9QXZ7 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
Nr2e3Q9QXZ7 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nr2e3Q9QXZ7 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nr2e3Q9QXZ7 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Nr2e3Q9QXZ7 Gm8668-201ENSMUST00000120559 1447 ntBASIC19.36■□□□□ 0.69
Nr2e3Q9QXZ7 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Nr2e3Q9QXZ7 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC19.36■□□□□ 0.69
Nr2e3Q9QXZ7 Gm7889-201ENSMUST00000185591 958 ntBASIC19.36■□□□□ 0.69
Nr2e3Q9QXZ7 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nr2e3Q9QXZ7 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Nr2e3Q9QXZ7 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Nr2e3Q9QXZ7 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nr2e3Q9QXZ7 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nr2e3Q9QXZ7 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nr2e3Q9QXZ7 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nr2e3Q9QXZ7 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nr2e3Q9QXZ7 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nr2e3Q9QXZ7 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nr2e3Q9QXZ7 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nr2e3Q9QXZ7 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nr2e3Q9QXZ7 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nr2e3Q9QXZ7 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nr2e3Q9QXZ7 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Nr2e3Q9QXZ7 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Nr2e3Q9QXZ7 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Nr2e3Q9QXZ7 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nr2e3Q9QXZ7 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Nr2e3Q9QXZ7 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC19.35■□□□□ 0.69
Nr2e3Q9QXZ7 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Nr2e3Q9QXZ7 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC19.35■□□□□ 0.69
Nr2e3Q9QXZ7 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nr2e3Q9QXZ7 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
Nr2e3Q9QXZ7 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nr2e3Q9QXZ7 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nr2e3Q9QXZ7 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nr2e3Q9QXZ7 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Nr2e3Q9QXZ7 Gm43338-201ENSMUST00000198617 2223 ntBASIC19.35■□□□□ 0.69
Nr2e3Q9QXZ7 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nr2e3Q9QXZ7 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nr2e3Q9QXZ7 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nr2e3Q9QXZ7 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nr2e3Q9QXZ7 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nr2e3Q9QXZ7 Gm2274-201ENSMUST00000184539 609 ntBASIC19.34■□□□□ 0.69
Nr2e3Q9QXZ7 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Nr2e3Q9QXZ7 AC159205.6-201ENSMUST00000224935 887 ntBASIC19.34■□□□□ 0.69
Nr2e3Q9QXZ7 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms