Protein–RNA interactions for Protein: Q9QXN0

Shroom3, Protein Shroom3, mousemouse

Predictions only

Length 1,986 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3Q9QXN0 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC17.2■□□□□ 0.34
Shroom3Q9QXN0 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
Shroom3Q9QXN0 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Shroom3Q9QXN0 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Shroom3Q9QXN0 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Shroom3Q9QXN0 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Shroom3Q9QXN0 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Shroom3Q9QXN0 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Shroom3Q9QXN0 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Shroom3Q9QXN0 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Shroom3Q9QXN0 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Shroom3Q9QXN0 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Shroom3Q9QXN0 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Shroom3Q9QXN0 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Shroom3Q9QXN0 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Shroom3Q9QXN0 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Shroom3Q9QXN0 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Shroom3Q9QXN0 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Shroom3Q9QXN0 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC17.18■□□□□ 0.34
Shroom3Q9QXN0 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Shroom3Q9QXN0 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Shroom3Q9QXN0 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC17.18■□□□□ 0.34
Shroom3Q9QXN0 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Shroom3Q9QXN0 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Shroom3Q9QXN0 Gm24841-201ENSMUST00000158676 357 ntBASIC17.18■□□□□ 0.34
Shroom3Q9QXN0 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC17.18■□□□□ 0.34
Shroom3Q9QXN0 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Shroom3Q9QXN0 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Shroom3Q9QXN0 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Shroom3Q9QXN0 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Shroom3Q9QXN0 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Shroom3Q9QXN0 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC17.18■□□□□ 0.34
Shroom3Q9QXN0 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Shroom3Q9QXN0 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
Shroom3Q9QXN0 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Shroom3Q9QXN0 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Shroom3Q9QXN0 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Shroom3Q9QXN0 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC17.17■□□□□ 0.34
Shroom3Q9QXN0 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Shroom3Q9QXN0 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Shroom3Q9QXN0 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Shroom3Q9QXN0 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Shroom3Q9QXN0 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Shroom3Q9QXN0 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Shroom3Q9QXN0 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
Shroom3Q9QXN0 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Shroom3Q9QXN0 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Shroom3Q9QXN0 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Shroom3Q9QXN0 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Shroom3Q9QXN0 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Shroom3Q9QXN0 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Shroom3Q9QXN0 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC17.17■□□□□ 0.34
Shroom3Q9QXN0 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Shroom3Q9QXN0 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
Shroom3Q9QXN0 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC17.17■□□□□ 0.34
Shroom3Q9QXN0 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Shroom3Q9QXN0 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Shroom3Q9QXN0 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Shroom3Q9QXN0 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Shroom3Q9QXN0 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC17.16■□□□□ 0.34
Shroom3Q9QXN0 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Shroom3Q9QXN0 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Shroom3Q9QXN0 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Shroom3Q9QXN0 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Shroom3Q9QXN0 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Shroom3Q9QXN0 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
Shroom3Q9QXN0 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Shroom3Q9QXN0 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC17.16■□□□□ 0.34
Shroom3Q9QXN0 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Shroom3Q9QXN0 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Shroom3Q9QXN0 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Shroom3Q9QXN0 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Shroom3Q9QXN0 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Shroom3Q9QXN0 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Shroom3Q9QXN0 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Shroom3Q9QXN0 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC17.16■□□□□ 0.34
Shroom3Q9QXN0 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Shroom3Q9QXN0 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Shroom3Q9QXN0 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Shroom3Q9QXN0 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Shroom3Q9QXN0 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Shroom3Q9QXN0 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Shroom3Q9QXN0 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Shroom3Q9QXN0 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC17.15■□□□□ 0.34
Shroom3Q9QXN0 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Shroom3Q9QXN0 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Shroom3Q9QXN0 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC17.15■□□□□ 0.34
Shroom3Q9QXN0 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Shroom3Q9QXN0 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Shroom3Q9QXN0 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Shroom3Q9QXN0 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Shroom3Q9QXN0 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC17.15■□□□□ 0.34
Shroom3Q9QXN0 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Shroom3Q9QXN0 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Shroom3Q9QXN0 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Shroom3Q9QXN0 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Shroom3Q9QXN0 Gm7638-201ENSMUST00000121348 967 ntBASIC17.15■□□□□ 0.34
Shroom3Q9QXN0 Gm33142-201ENSMUST00000193913 867 ntBASIC17.15■□□□□ 0.34
Shroom3Q9QXN0 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC17.15■□□□□ 0.34
Shroom3Q9QXN0 Gm45058-201ENSMUST00000205810 766 ntBASIC17.15■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms