Protein–RNA interactions for Protein: Q9EPU0

Upf1, Regulator of nonsense transcripts 1, mousemouse

Known RBP Predictions only

Length 1,124 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1Q9EPU0 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC19.53■□□□□ 0.72
Upf1Q9EPU0 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Upf1Q9EPU0 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Upf1Q9EPU0 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Upf1Q9EPU0 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Upf1Q9EPU0 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Upf1Q9EPU0 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC19.53■□□□□ 0.72
Upf1Q9EPU0 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Upf1Q9EPU0 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Upf1Q9EPU0 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC19.53■□□□□ 0.72
Upf1Q9EPU0 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC19.52■□□□□ 0.72
Upf1Q9EPU0 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Upf1Q9EPU0 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Upf1Q9EPU0 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Upf1Q9EPU0 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Upf1Q9EPU0 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Upf1Q9EPU0 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Upf1Q9EPU0 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Upf1Q9EPU0 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC19.52■□□□□ 0.72
Upf1Q9EPU0 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC19.52■□□□□ 0.72
Upf1Q9EPU0 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Upf1Q9EPU0 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Upf1Q9EPU0 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Upf1Q9EPU0 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Upf1Q9EPU0 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Upf1Q9EPU0 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.52■□□□□ 0.72
Upf1Q9EPU0 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Upf1Q9EPU0 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Upf1Q9EPU0 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Upf1Q9EPU0 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Upf1Q9EPU0 Gm11780-201ENSMUST00000136880 516 ntBASIC19.51■□□□□ 0.71
Upf1Q9EPU0 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
Upf1Q9EPU0 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Upf1Q9EPU0 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC19.51■□□□□ 0.71
Upf1Q9EPU0 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Upf1Q9EPU0 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Upf1Q9EPU0 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Upf1Q9EPU0 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Upf1Q9EPU0 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Upf1Q9EPU0 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Upf1Q9EPU0 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Upf1Q9EPU0 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Upf1Q9EPU0 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Upf1Q9EPU0 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Upf1Q9EPU0 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC19.5■□□□□ 0.71
Upf1Q9EPU0 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Upf1Q9EPU0 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
Upf1Q9EPU0 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Upf1Q9EPU0 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC19.5■□□□□ 0.71
Upf1Q9EPU0 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Upf1Q9EPU0 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Upf1Q9EPU0 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC19.5■□□□□ 0.71
Upf1Q9EPU0 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Upf1Q9EPU0 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Upf1Q9EPU0 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Upf1Q9EPU0 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Upf1Q9EPU0 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Upf1Q9EPU0 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Upf1Q9EPU0 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Upf1Q9EPU0 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Upf1Q9EPU0 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Upf1Q9EPU0 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Upf1Q9EPU0 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Upf1Q9EPU0 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Upf1Q9EPU0 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
Upf1Q9EPU0 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Upf1Q9EPU0 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Upf1Q9EPU0 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Upf1Q9EPU0 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Upf1Q9EPU0 Gm29707-201ENSMUST00000196325 491 ntBASIC19.49■□□□□ 0.71
Upf1Q9EPU0 Gm7506-201ENSMUST00000207758 815 ntBASIC19.49■□□□□ 0.71
Upf1Q9EPU0 CT025535.1-201ENSMUST00000227172 491 ntBASIC19.49■□□□□ 0.71
Upf1Q9EPU0 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Upf1Q9EPU0 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Upf1Q9EPU0 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC19.49■□□□□ 0.71
Upf1Q9EPU0 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Upf1Q9EPU0 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Upf1Q9EPU0 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Upf1Q9EPU0 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Upf1Q9EPU0 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Upf1Q9EPU0 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Upf1Q9EPU0 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Upf1Q9EPU0 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC19.48■□□□□ 0.71
Upf1Q9EPU0 Golph3-202ENSMUST00000226517 2359 ntBASIC19.48■□□□□ 0.71
Upf1Q9EPU0 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Upf1Q9EPU0 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Upf1Q9EPU0 Gm23547-201ENSMUST00000158210 271 ntBASIC19.48■□□□□ 0.71
Upf1Q9EPU0 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
Upf1Q9EPU0 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Upf1Q9EPU0 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Upf1Q9EPU0 Gm37500-201ENSMUST00000192059 1443 ntBASIC19.48■□□□□ 0.71
Upf1Q9EPU0 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Upf1Q9EPU0 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Upf1Q9EPU0 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Upf1Q9EPU0 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
Upf1Q9EPU0 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Upf1Q9EPU0 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Upf1Q9EPU0 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Upf1Q9EPU0 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Upf1Q9EPU0 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC19.47■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms