Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rrp8Q9DB85 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Rrp8Q9DB85 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Rrp8Q9DB85 Gm24589-201ENSMUST00000116692 94 ntBASIC16.79■□□□□ 0.28
Rrp8Q9DB85 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Rrp8Q9DB85 Ighv6-1-201ENSMUST00000193612 343 ntBASIC16.79■□□□□ 0.28
Rrp8Q9DB85 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC16.79■□□□□ 0.28
Rrp8Q9DB85 Spr-ps1-201ENSMUST00000089584 605 ntBASIC16.79■□□□□ 0.28
Rrp8Q9DB85 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC16.79■□□□□ 0.28
Rrp8Q9DB85 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rrp8Q9DB85 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rrp8Q9DB85 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rrp8Q9DB85 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rrp8Q9DB85 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Rrp8Q9DB85 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC16.79■□□□□ 0.28
Rrp8Q9DB85 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rrp8Q9DB85 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
Rrp8Q9DB85 Gm43231-201ENSMUST00000202960 2258 ntBASIC16.79■□□□□ 0.28
Rrp8Q9DB85 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rrp8Q9DB85 Idnk-204ENSMUST00000226010 1898 ntBASIC16.78■□□□□ 0.28
Rrp8Q9DB85 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rrp8Q9DB85 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Rrp8Q9DB85 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Rrp8Q9DB85 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Rrp8Q9DB85 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC16.78■□□□□ 0.28
Rrp8Q9DB85 AC154855.1-201ENSMUST00000227353 1458 ntBASIC16.78■□□□□ 0.28
Rrp8Q9DB85 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rrp8Q9DB85 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rrp8Q9DB85 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Rrp8Q9DB85 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rrp8Q9DB85 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rrp8Q9DB85 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rrp8Q9DB85 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Rrp8Q9DB85 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rrp8Q9DB85 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Rrp8Q9DB85 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rrp8Q9DB85 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
Rrp8Q9DB85 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rrp8Q9DB85 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Rrp8Q9DB85 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rrp8Q9DB85 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC16.77■□□□□ 0.28
Rrp8Q9DB85 Gm44771-201ENSMUST00000206975 626 ntBASIC16.77■□□□□ 0.28
Rrp8Q9DB85 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rrp8Q9DB85 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC16.77■□□□□ 0.28
Rrp8Q9DB85 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Rrp8Q9DB85 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC16.77■□□□□ 0.28
Rrp8Q9DB85 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rrp8Q9DB85 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
Rrp8Q9DB85 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC16.77■□□□□ 0.27
Rrp8Q9DB85 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Rrp8Q9DB85 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC16.77■□□□□ 0.27
Rrp8Q9DB85 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC16.76■□□□□ 0.27
Rrp8Q9DB85 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Rrp8Q9DB85 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rrp8Q9DB85 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rrp8Q9DB85 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rrp8Q9DB85 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Rrp8Q9DB85 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
Rrp8Q9DB85 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
Rrp8Q9DB85 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Rrp8Q9DB85 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rrp8Q9DB85 Gm18115-201ENSMUST00000221209 621 ntBASIC16.76■□□□□ 0.27
Rrp8Q9DB85 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Rrp8Q9DB85 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC16.76■□□□□ 0.27
Rrp8Q9DB85 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Rrp8Q9DB85 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Rrp8Q9DB85 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rrp8Q9DB85 Gm43272-201ENSMUST00000200599 1584 ntBASIC16.76■□□□□ 0.27
Rrp8Q9DB85 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rrp8Q9DB85 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rrp8Q9DB85 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rrp8Q9DB85 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rrp8Q9DB85 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rrp8Q9DB85 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rrp8Q9DB85 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rrp8Q9DB85 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Rrp8Q9DB85 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rrp8Q9DB85 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Rrp8Q9DB85 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
Rrp8Q9DB85 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Rrp8Q9DB85 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rrp8Q9DB85 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Rrp8Q9DB85 Gm19721-201ENSMUST00000195284 1764 ntBASIC16.75■□□□□ 0.27
Rrp8Q9DB85 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rrp8Q9DB85 Mir8112-201ENSMUST00000184382 131 ntBASIC16.75■□□□□ 0.27
Rrp8Q9DB85 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Rrp8Q9DB85 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rrp8Q9DB85 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rrp8Q9DB85 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rrp8Q9DB85 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Rrp8Q9DB85 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC16.75■□□□□ 0.27
Rrp8Q9DB85 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
Rrp8Q9DB85 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Rrp8Q9DB85 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rrp8Q9DB85 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rrp8Q9DB85 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rrp8Q9DB85 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rrp8Q9DB85 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Rrp8Q9DB85 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rrp8Q9DB85 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms