Protein–RNA interactions for Protein: Q9DA80

Rsph3b, Radial spoke head protein 3 homolog B, mousemouse

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsph3bQ9DA80 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rsph3bQ9DA80 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rsph3bQ9DA80 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Rsph3bQ9DA80 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Rsph3bQ9DA80 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rsph3bQ9DA80 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rsph3bQ9DA80 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rsph3bQ9DA80 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rsph3bQ9DA80 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rsph3bQ9DA80 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rsph3bQ9DA80 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rsph3bQ9DA80 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rsph3bQ9DA80 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Rsph3bQ9DA80 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rsph3bQ9DA80 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rsph3bQ9DA80 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Rsph3bQ9DA80 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC18.8■□□□□ 0.6
Rsph3bQ9DA80 Mir1668-201ENSMUST00000184114 107 ntBASIC18.8■□□□□ 0.6
Rsph3bQ9DA80 Gm33142-201ENSMUST00000193913 867 ntBASIC18.8■□□□□ 0.6
Rsph3bQ9DA80 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rsph3bQ9DA80 Gm10819-201ENSMUST00000099988 561 ntBASIC18.8■□□□□ 0.6
Rsph3bQ9DA80 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rsph3bQ9DA80 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rsph3bQ9DA80 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rsph3bQ9DA80 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rsph3bQ9DA80 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rsph3bQ9DA80 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Rsph3bQ9DA80 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rsph3bQ9DA80 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rsph3bQ9DA80 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rsph3bQ9DA80 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rsph3bQ9DA80 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rsph3bQ9DA80 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rsph3bQ9DA80 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Rsph3bQ9DA80 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rsph3bQ9DA80 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rsph3bQ9DA80 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Rsph3bQ9DA80 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Rsph3bQ9DA80 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC18.79■□□□□ 0.6
Rsph3bQ9DA80 Gm25016-201ENSMUST00000158399 131 ntBASIC18.79■□□□□ 0.6
Rsph3bQ9DA80 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC18.79■□□□□ 0.6
Rsph3bQ9DA80 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC18.79■□□□□ 0.6
Rsph3bQ9DA80 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rsph3bQ9DA80 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Rsph3bQ9DA80 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Rsph3bQ9DA80 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rsph3bQ9DA80 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rsph3bQ9DA80 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC18.79■□□□□ 0.6
Rsph3bQ9DA80 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Rsph3bQ9DA80 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Rsph3bQ9DA80 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Rsph3bQ9DA80 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rsph3bQ9DA80 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rsph3bQ9DA80 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Rsph3bQ9DA80 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rsph3bQ9DA80 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rsph3bQ9DA80 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC18.78■□□□□ 0.6
Rsph3bQ9DA80 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Rsph3bQ9DA80 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Rsph3bQ9DA80 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Rsph3bQ9DA80 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rsph3bQ9DA80 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC18.78■□□□□ 0.6
Rsph3bQ9DA80 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC18.78■□□□□ 0.6
Rsph3bQ9DA80 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
Rsph3bQ9DA80 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC18.78■□□□□ 0.6
Rsph3bQ9DA80 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rsph3bQ9DA80 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rsph3bQ9DA80 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Rsph3bQ9DA80 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rsph3bQ9DA80 Gm9954-202ENSMUST00000198686 4725 ntBASIC18.77■□□□□ 0.6
Rsph3bQ9DA80 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rsph3bQ9DA80 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Rsph3bQ9DA80 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Rsph3bQ9DA80 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rsph3bQ9DA80 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rsph3bQ9DA80 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Rsph3bQ9DA80 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rsph3bQ9DA80 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rsph3bQ9DA80 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Rsph3bQ9DA80 Gm19721-201ENSMUST00000195284 1764 ntBASIC18.77■□□□□ 0.6
Rsph3bQ9DA80 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Rsph3bQ9DA80 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Rsph3bQ9DA80 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Rsph3bQ9DA80 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Rsph3bQ9DA80 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Rsph3bQ9DA80 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
Rsph3bQ9DA80 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Rsph3bQ9DA80 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rsph3bQ9DA80 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rsph3bQ9DA80 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rsph3bQ9DA80 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Rsph3bQ9DA80 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rsph3bQ9DA80 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Rsph3bQ9DA80 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Rsph3bQ9DA80 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rsph3bQ9DA80 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC18.76■□□□□ 0.59
Rsph3bQ9DA80 Gm10459-201ENSMUST00000202708 1155 ntBASIC18.76■□□□□ 0.59
Rsph3bQ9DA80 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC18.76■□□□□ 0.59
Rsph3bQ9DA80 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC18.76■□□□□ 0.59
Rsph3bQ9DA80 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms