Protein–RNA interactions for Protein: Q9D541

Ccdc7, Coiled-coil domain-containing protein 7, mousemouse

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc7Q9D541 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC20.06■□□□□ 0.8
Ccdc7Q9D541 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ccdc7Q9D541 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ccdc7Q9D541 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Ccdc7Q9D541 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC20.06■□□□□ 0.8
Ccdc7Q9D541 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ccdc7Q9D541 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC20.06■□□□□ 0.8
Ccdc7Q9D541 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC20.06■□□□□ 0.8
Ccdc7Q9D541 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ccdc7Q9D541 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ccdc7Q9D541 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC20.06■□□□□ 0.8
Ccdc7Q9D541 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ccdc7Q9D541 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ccdc7Q9D541 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
Ccdc7Q9D541 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Ccdc7Q9D541 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ccdc7Q9D541 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ccdc7Q9D541 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ccdc7Q9D541 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC20.05■□□□□ 0.8
Ccdc7Q9D541 Gm9694-201ENSMUST00000193347 1189 ntBASIC20.05■□□□□ 0.8
Ccdc7Q9D541 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Ccdc7Q9D541 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ccdc7Q9D541 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ccdc7Q9D541 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Ccdc7Q9D541 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ccdc7Q9D541 AC124581.1-201ENSMUST00000225416 1399 ntBASIC20.05■□□□□ 0.8
Ccdc7Q9D541 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ccdc7Q9D541 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Ccdc7Q9D541 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ccdc7Q9D541 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ccdc7Q9D541 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Ccdc7Q9D541 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ccdc7Q9D541 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ccdc7Q9D541 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ccdc7Q9D541 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ccdc7Q9D541 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC20.04■□□□□ 0.8
Ccdc7Q9D541 Gm37025-201ENSMUST00000195159 829 ntBASIC20.04■□□□□ 0.8
Ccdc7Q9D541 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ccdc7Q9D541 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Ccdc7Q9D541 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ccdc7Q9D541 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ccdc7Q9D541 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC20.04■□□□□ 0.8
Ccdc7Q9D541 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ccdc7Q9D541 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ccdc7Q9D541 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Ccdc7Q9D541 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ccdc7Q9D541 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc7Q9D541 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC20.03■□□□□ 0.8
Ccdc7Q9D541 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc7Q9D541 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc7Q9D541 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc7Q9D541 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC20.03■□□□□ 0.8
Ccdc7Q9D541 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc7Q9D541 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc7Q9D541 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc7Q9D541 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
Ccdc7Q9D541 AC135637.1-201ENSMUST00000227750 365 ntBASIC20.03■□□□□ 0.8
Ccdc7Q9D541 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc7Q9D541 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc7Q9D541 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC20.03■□□□□ 0.8
Ccdc7Q9D541 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc7Q9D541 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc7Q9D541 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc7Q9D541 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc7Q9D541 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc7Q9D541 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ccdc7Q9D541 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ccdc7Q9D541 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Ccdc7Q9D541 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ccdc7Q9D541 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Ccdc7Q9D541 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ccdc7Q9D541 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC20.02■□□□□ 0.8
Ccdc7Q9D541 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Ccdc7Q9D541 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ccdc7Q9D541 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ccdc7Q9D541 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
Ccdc7Q9D541 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Ccdc7Q9D541 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC20.02■□□□□ 0.79
Ccdc7Q9D541 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC20.01■□□□□ 0.79
Ccdc7Q9D541 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ccdc7Q9D541 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ccdc7Q9D541 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
Ccdc7Q9D541 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ccdc7Q9D541 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ccdc7Q9D541 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC20.01■□□□□ 0.79
Ccdc7Q9D541 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ccdc7Q9D541 AC107711.5-202ENSMUST00000226429 702 ntBASIC20.01■□□□□ 0.79
Ccdc7Q9D541 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Ccdc7Q9D541 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Ccdc7Q9D541 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ccdc7Q9D541 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ccdc7Q9D541 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Ccdc7Q9D541 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC20■□□□□ 0.79
Ccdc7Q9D541 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC20■□□□□ 0.79
Ccdc7Q9D541 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC20■□□□□ 0.79
Ccdc7Q9D541 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC20■□□□□ 0.79
Ccdc7Q9D541 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ccdc7Q9D541 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC20■□□□□ 0.79
Ccdc7Q9D541 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ccdc7Q9D541 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms