Protein–RNA interactions for Protein: Q9D439

Cfap53, Cilia- and flagella-associated protein 53, mousemouse

Predictions only

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap53Q9D439 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cfap53Q9D439 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cfap53Q9D439 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cfap53Q9D439 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Cfap53Q9D439 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cfap53Q9D439 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cfap53Q9D439 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Cfap53Q9D439 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cfap53Q9D439 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Cfap53Q9D439 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Cfap53Q9D439 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Cfap53Q9D439 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC18.82■□□□□ 0.6
Cfap53Q9D439 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Cfap53Q9D439 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cfap53Q9D439 Gm10812-201ENSMUST00000099864 546 ntBASIC18.82■□□□□ 0.6
Cfap53Q9D439 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cfap53Q9D439 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cfap53Q9D439 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Cfap53Q9D439 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cfap53Q9D439 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cfap53Q9D439 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cfap53Q9D439 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cfap53Q9D439 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC18.82■□□□□ 0.6
Cfap53Q9D439 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Cfap53Q9D439 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cfap53Q9D439 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cfap53Q9D439 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cfap53Q9D439 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Cfap53Q9D439 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cfap53Q9D439 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cfap53Q9D439 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Cfap53Q9D439 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
Cfap53Q9D439 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cfap53Q9D439 Mir1199-201ENSMUST00000117015 119 ntBASIC18.81■□□□□ 0.6
Cfap53Q9D439 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Cfap53Q9D439 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC18.81■□□□□ 0.6
Cfap53Q9D439 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC18.81■□□□□ 0.6
Cfap53Q9D439 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cfap53Q9D439 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cfap53Q9D439 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cfap53Q9D439 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Cfap53Q9D439 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC18.81■□□□□ 0.6
Cfap53Q9D439 Gm37519-201ENSMUST00000191687 2210 ntBASIC18.81■□□□□ 0.6
Cfap53Q9D439 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cfap53Q9D439 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cfap53Q9D439 Gm43808-201ENSMUST00000202534 2065 ntBASIC18.8■□□□□ 0.6
Cfap53Q9D439 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Cfap53Q9D439 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cfap53Q9D439 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Cfap53Q9D439 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Cfap53Q9D439 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cfap53Q9D439 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC18.8■□□□□ 0.6
Cfap53Q9D439 AC112142.1-201ENSMUST00000228796 918 ntBASIC18.8■□□□□ 0.6
Cfap53Q9D439 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cfap53Q9D439 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cfap53Q9D439 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Cfap53Q9D439 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cfap53Q9D439 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Cfap53Q9D439 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Cfap53Q9D439 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cfap53Q9D439 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cfap53Q9D439 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Cfap53Q9D439 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Cfap53Q9D439 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
Cfap53Q9D439 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cfap53Q9D439 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Cfap53Q9D439 Gm24841-201ENSMUST00000158676 357 ntBASIC18.79■□□□□ 0.6
Cfap53Q9D439 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC18.79■□□□□ 0.6
Cfap53Q9D439 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC18.79■□□□□ 0.6
Cfap53Q9D439 AC153881.1-201ENSMUST00000214448 284 ntBASIC18.79■□□□□ 0.6
Cfap53Q9D439 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Cfap53Q9D439 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Cfap53Q9D439 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Cfap53Q9D439 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cfap53Q9D439 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cfap53Q9D439 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Cfap53Q9D439 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC18.79■□□□□ 0.6
Cfap53Q9D439 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Cfap53Q9D439 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cfap53Q9D439 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cfap53Q9D439 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Cfap53Q9D439 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Cfap53Q9D439 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cfap53Q9D439 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Cfap53Q9D439 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Cfap53Q9D439 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cfap53Q9D439 Ddx41-204ENSMUST00000224765 2199 ntBASIC18.78■□□□□ 0.6
Cfap53Q9D439 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cfap53Q9D439 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Cfap53Q9D439 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cfap53Q9D439 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Cfap53Q9D439 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Cfap53Q9D439 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Cfap53Q9D439 AC121598.2-201ENSMUST00000228376 2325 ntBASIC18.78■□□□□ 0.6
Cfap53Q9D439 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cfap53Q9D439 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cfap53Q9D439 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cfap53Q9D439 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cfap53Q9D439 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cfap53Q9D439 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms