Protein–RNA interactions for Protein: Q9D3E6

Stag1, Cohesin subunit SA-1, mousemouse

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1Q9D3E6 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Stag1Q9D3E6 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Stag1Q9D3E6 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC20.43■□□□□ 0.86
Stag1Q9D3E6 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC20.43■□□□□ 0.86
Stag1Q9D3E6 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Stag1Q9D3E6 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Stag1Q9D3E6 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Stag1Q9D3E6 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Stag1Q9D3E6 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Stag1Q9D3E6 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Stag1Q9D3E6 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Stag1Q9D3E6 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC20.42■□□□□ 0.86
Stag1Q9D3E6 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC20.42■□□□□ 0.86
Stag1Q9D3E6 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC20.42■□□□□ 0.86
Stag1Q9D3E6 Gm37722-201ENSMUST00000193757 208 ntBASIC20.42■□□□□ 0.86
Stag1Q9D3E6 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC20.42■□□□□ 0.86
Stag1Q9D3E6 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC20.42■□□□□ 0.86
Stag1Q9D3E6 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Stag1Q9D3E6 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Stag1Q9D3E6 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Stag1Q9D3E6 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Stag1Q9D3E6 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Stag1Q9D3E6 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Stag1Q9D3E6 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC20.42■□□□□ 0.86
Stag1Q9D3E6 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Stag1Q9D3E6 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Stag1Q9D3E6 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Stag1Q9D3E6 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Stag1Q9D3E6 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Stag1Q9D3E6 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Stag1Q9D3E6 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Stag1Q9D3E6 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Stag1Q9D3E6 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Stag1Q9D3E6 Gm11860-201ENSMUST00000122346 1010 ntBASIC20.41■□□□□ 0.86
Stag1Q9D3E6 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Stag1Q9D3E6 AC130713.1-201ENSMUST00000228853 1096 ntBASIC20.41■□□□□ 0.86
Stag1Q9D3E6 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Stag1Q9D3E6 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC20.41■□□□□ 0.86
Stag1Q9D3E6 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Stag1Q9D3E6 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Stag1Q9D3E6 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Stag1Q9D3E6 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Stag1Q9D3E6 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Stag1Q9D3E6 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Stag1Q9D3E6 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Stag1Q9D3E6 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC20.4■□□□□ 0.86
Stag1Q9D3E6 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Stag1Q9D3E6 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Stag1Q9D3E6 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Stag1Q9D3E6 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC20.4■□□□□ 0.86
Stag1Q9D3E6 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Stag1Q9D3E6 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Stag1Q9D3E6 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Stag1Q9D3E6 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Stag1Q9D3E6 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Stag1Q9D3E6 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Stag1Q9D3E6 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Stag1Q9D3E6 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Stag1Q9D3E6 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Stag1Q9D3E6 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Stag1Q9D3E6 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
Stag1Q9D3E6 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Stag1Q9D3E6 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Stag1Q9D3E6 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Stag1Q9D3E6 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Stag1Q9D3E6 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Stag1Q9D3E6 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Stag1Q9D3E6 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Stag1Q9D3E6 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Stag1Q9D3E6 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Stag1Q9D3E6 Mir770-201ENSMUST00000103252 94 ntBASIC20.39■□□□□ 0.85
Stag1Q9D3E6 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Stag1Q9D3E6 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC20.39■□□□□ 0.85
Stag1Q9D3E6 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Stag1Q9D3E6 Gm6623-201ENSMUST00000173570 544 ntBASIC20.39■□□□□ 0.85
Stag1Q9D3E6 Gm17807-201ENSMUST00000186869 298 ntBASIC20.39■□□□□ 0.85
Stag1Q9D3E6 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Stag1Q9D3E6 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Stag1Q9D3E6 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Stag1Q9D3E6 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Stag1Q9D3E6 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC20.38■□□□□ 0.85
Stag1Q9D3E6 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Stag1Q9D3E6 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Stag1Q9D3E6 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Stag1Q9D3E6 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Stag1Q9D3E6 Zcchc6-207ENSMUST00000225576 2499 ntBASIC20.37■□□□□ 0.85
Stag1Q9D3E6 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC20.37■□□□□ 0.85
Stag1Q9D3E6 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Stag1Q9D3E6 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC20.37■□□□□ 0.85
Stag1Q9D3E6 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Stag1Q9D3E6 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Stag1Q9D3E6 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC20.37■□□□□ 0.85
Stag1Q9D3E6 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Stag1Q9D3E6 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
Stag1Q9D3E6 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC20.37■□□□□ 0.85
Stag1Q9D3E6 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC20.37■□□□□ 0.85
Stag1Q9D3E6 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Stag1Q9D3E6 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Stag1Q9D3E6 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Stag1Q9D3E6 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 68.2 ms