Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
Trim42Q9D2H5 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Trim42Q9D2H5 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC17.18■□□□□ 0.34
Trim42Q9D2H5 Gm10418-201ENSMUST00000100943 576 ntBASIC17.18■□□□□ 0.34
Trim42Q9D2H5 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC17.18■□□□□ 0.34
Trim42Q9D2H5 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trim42Q9D2H5 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Trim42Q9D2H5 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim42Q9D2H5 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Trim42Q9D2H5 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim42Q9D2H5 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC17.17■□□□□ 0.34
Trim42Q9D2H5 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Trim42Q9D2H5 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Trim42Q9D2H5 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim42Q9D2H5 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Trim42Q9D2H5 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim42Q9D2H5 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
Trim42Q9D2H5 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Trim42Q9D2H5 Mir8112-201ENSMUST00000184382 131 ntBASIC17.17■□□□□ 0.34
Trim42Q9D2H5 Gm29791-202ENSMUST00000207888 369 ntBASIC17.17■□□□□ 0.34
Trim42Q9D2H5 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC17.17■□□□□ 0.34
Trim42Q9D2H5 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Trim42Q9D2H5 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim42Q9D2H5 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim42Q9D2H5 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim42Q9D2H5 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim42Q9D2H5 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Trim42Q9D2H5 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim42Q9D2H5 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim42Q9D2H5 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Trim42Q9D2H5 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC17.16■□□□□ 0.34
Trim42Q9D2H5 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC17.16■□□□□ 0.34
Trim42Q9D2H5 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim42Q9D2H5 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim42Q9D2H5 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim42Q9D2H5 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
Trim42Q9D2H5 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim42Q9D2H5 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC17.16■□□□□ 0.34
Trim42Q9D2H5 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim42Q9D2H5 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC17.16■□□□□ 0.34
Trim42Q9D2H5 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim42Q9D2H5 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim42Q9D2H5 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim42Q9D2H5 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim42Q9D2H5 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim42Q9D2H5 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim42Q9D2H5 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Trim42Q9D2H5 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
Trim42Q9D2H5 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Trim42Q9D2H5 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim42Q9D2H5 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim42Q9D2H5 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim42Q9D2H5 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
Trim42Q9D2H5 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Trim42Q9D2H5 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trim42Q9D2H5 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim42Q9D2H5 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim42Q9D2H5 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim42Q9D2H5 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Trim42Q9D2H5 Gm37166-201ENSMUST00000195473 2474 ntBASIC17.15■□□□□ 0.34
Trim42Q9D2H5 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim42Q9D2H5 AC069562.2-201ENSMUST00000224644 2146 ntBASIC17.15■□□□□ 0.34
Trim42Q9D2H5 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim42Q9D2H5 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim42Q9D2H5 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.34
Trim42Q9D2H5 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
Trim42Q9D2H5 Gm26917-202ENSMUST00000192833 3329 ntBASIC17.14■□□□□ 0.34
Trim42Q9D2H5 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Trim42Q9D2H5 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Trim42Q9D2H5 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trim42Q9D2H5 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim42Q9D2H5 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC17.14■□□□□ 0.33
Trim42Q9D2H5 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim42Q9D2H5 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Trim42Q9D2H5 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim42Q9D2H5 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC17.14■□□□□ 0.33
Trim42Q9D2H5 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trim42Q9D2H5 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim42Q9D2H5 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim42Q9D2H5 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trim42Q9D2H5 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim42Q9D2H5 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim42Q9D2H5 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim42Q9D2H5 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Trim42Q9D2H5 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim42Q9D2H5 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trim42Q9D2H5 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim42Q9D2H5 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim42Q9D2H5 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim42Q9D2H5 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trim42Q9D2H5 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim42Q9D2H5 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Trim42Q9D2H5 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
Trim42Q9D2H5 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
Trim42Q9D2H5 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim42Q9D2H5 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trim42Q9D2H5 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim42Q9D2H5 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim42Q9D2H5 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trim42Q9D2H5 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms