Protein–RNA interactions for Protein: Q9D071

Mms19, MMS19 nucleotide excision repair protein homolog, mousemouse

Predictions only

Length 1,031 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mms19Q9D071 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Mms19Q9D071 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Mms19Q9D071 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Mms19Q9D071 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Mms19Q9D071 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Mms19Q9D071 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Mms19Q9D071 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC18.35■□□□□ 0.53
Mms19Q9D071 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Mms19Q9D071 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Mms19Q9D071 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Mms19Q9D071 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC18.35■□□□□ 0.53
Mms19Q9D071 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
Mms19Q9D071 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Mms19Q9D071 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Mms19Q9D071 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Mms19Q9D071 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Mms19Q9D071 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC18.35■□□□□ 0.53
Mms19Q9D071 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Mms19Q9D071 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Mms19Q9D071 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Mms19Q9D071 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC18.35■□□□□ 0.53
Mms19Q9D071 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Mms19Q9D071 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Mms19Q9D071 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Mms19Q9D071 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Mms19Q9D071 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Mms19Q9D071 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Mms19Q9D071 Gm37811-201ENSMUST00000192416 2601 ntBASIC18.34■□□□□ 0.53
Mms19Q9D071 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Mms19Q9D071 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Mms19Q9D071 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Mms19Q9D071 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Mms19Q9D071 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC18.34■□□□□ 0.53
Mms19Q9D071 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC18.34■□□□□ 0.53
Mms19Q9D071 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Mms19Q9D071 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Mms19Q9D071 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Mms19Q9D071 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Mms19Q9D071 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Mms19Q9D071 Gm29994-201ENSMUST00000195495 1193 ntBASIC18.34■□□□□ 0.53
Mms19Q9D071 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Mms19Q9D071 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Mms19Q9D071 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Mms19Q9D071 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Mms19Q9D071 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Mms19Q9D071 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Mms19Q9D071 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Mms19Q9D071 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Mms19Q9D071 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Mms19Q9D071 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Mms19Q9D071 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Mms19Q9D071 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC18.33■□□□□ 0.53
Mms19Q9D071 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Mms19Q9D071 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Mms19Q9D071 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Mms19Q9D071 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Mms19Q9D071 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Mms19Q9D071 Gm27463-201ENSMUST00000183569 57 ntBASIC18.33■□□□□ 0.52
Mms19Q9D071 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Mms19Q9D071 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC18.33■□□□□ 0.52
Mms19Q9D071 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Mms19Q9D071 Gm9987-201ENSMUST00000069768 567 ntBASIC18.33■□□□□ 0.52
Mms19Q9D071 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Mms19Q9D071 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Mms19Q9D071 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Mms19Q9D071 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Mms19Q9D071 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Mms19Q9D071 Gm8668-201ENSMUST00000120559 1447 ntBASIC18.32■□□□□ 0.52
Mms19Q9D071 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Mms19Q9D071 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Mms19Q9D071 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC18.32■□□□□ 0.52
Mms19Q9D071 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Mms19Q9D071 AC125311.2-201ENSMUST00000227477 1940 ntBASIC18.32■□□□□ 0.52
Mms19Q9D071 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC18.32■□□□□ 0.52
Mms19Q9D071 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Mms19Q9D071 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Mms19Q9D071 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Mms19Q9D071 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Mms19Q9D071 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
Mms19Q9D071 Gm19721-201ENSMUST00000195284 1764 ntBASIC18.32■□□□□ 0.52
Mms19Q9D071 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Mms19Q9D071 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC18.32■□□□□ 0.52
Mms19Q9D071 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Mms19Q9D071 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Mms19Q9D071 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Mms19Q9D071 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Mms19Q9D071 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Mms19Q9D071 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Mms19Q9D071 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Mms19Q9D071 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Mms19Q9D071 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Mms19Q9D071 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Mms19Q9D071 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC18.31■□□□□ 0.52
Mms19Q9D071 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC18.31■□□□□ 0.52
Mms19Q9D071 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Mms19Q9D071 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Mms19Q9D071 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Mms19Q9D071 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Mms19Q9D071 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Mms19Q9D071 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms