Protein–RNA interactions for Protein: Q9CTH6

Fcf1, rRNA-processing protein FCF1 homolog, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fcf1Q9CTH6 Gm7370-201ENSMUST00000219471 767 ntBASIC17.28■□□□□ 0.36
Fcf1Q9CTH6 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Fcf1Q9CTH6 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
Fcf1Q9CTH6 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC17.28■□□□□ 0.36
Fcf1Q9CTH6 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Fcf1Q9CTH6 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
Fcf1Q9CTH6 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Fcf1Q9CTH6 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Fcf1Q9CTH6 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Fcf1Q9CTH6 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Fcf1Q9CTH6 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Fcf1Q9CTH6 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Fcf1Q9CTH6 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
Fcf1Q9CTH6 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Fcf1Q9CTH6 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Fcf1Q9CTH6 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Fcf1Q9CTH6 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC17.27■□□□□ 0.36
Fcf1Q9CTH6 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC17.27■□□□□ 0.36
Fcf1Q9CTH6 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC17.27■□□□□ 0.36
Fcf1Q9CTH6 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Fcf1Q9CTH6 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Fcf1Q9CTH6 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Fcf1Q9CTH6 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Fcf1Q9CTH6 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Fcf1Q9CTH6 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Fcf1Q9CTH6 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Fcf1Q9CTH6 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Fcf1Q9CTH6 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Fcf1Q9CTH6 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC17.26■□□□□ 0.35
Fcf1Q9CTH6 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Fcf1Q9CTH6 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Fcf1Q9CTH6 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Fcf1Q9CTH6 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Fcf1Q9CTH6 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Fcf1Q9CTH6 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Fcf1Q9CTH6 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Fcf1Q9CTH6 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Fcf1Q9CTH6 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Fcf1Q9CTH6 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Fcf1Q9CTH6 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Fcf1Q9CTH6 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Fcf1Q9CTH6 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Fcf1Q9CTH6 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
Fcf1Q9CTH6 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Fcf1Q9CTH6 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Fcf1Q9CTH6 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC17.25■□□□□ 0.35
Fcf1Q9CTH6 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Fcf1Q9CTH6 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Fcf1Q9CTH6 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Fcf1Q9CTH6 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Fcf1Q9CTH6 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Fcf1Q9CTH6 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Fcf1Q9CTH6 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC17.25■□□□□ 0.35
Fcf1Q9CTH6 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Fcf1Q9CTH6 Gm16061-201ENSMUST00000122167 857 ntBASIC17.25■□□□□ 0.35
Fcf1Q9CTH6 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC17.25■□□□□ 0.35
Fcf1Q9CTH6 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Fcf1Q9CTH6 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC17.25■□□□□ 0.35
Fcf1Q9CTH6 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC17.25■□□□□ 0.35
Fcf1Q9CTH6 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Fcf1Q9CTH6 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Fcf1Q9CTH6 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Fcf1Q9CTH6 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Fcf1Q9CTH6 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Fcf1Q9CTH6 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Fcf1Q9CTH6 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Fcf1Q9CTH6 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Fcf1Q9CTH6 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Fcf1Q9CTH6 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Fcf1Q9CTH6 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Fcf1Q9CTH6 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Fcf1Q9CTH6 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Fcf1Q9CTH6 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC17.24■□□□□ 0.35
Fcf1Q9CTH6 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC17.24■□□□□ 0.35
Fcf1Q9CTH6 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Fcf1Q9CTH6 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Fcf1Q9CTH6 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Fcf1Q9CTH6 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
Fcf1Q9CTH6 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Fcf1Q9CTH6 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Fcf1Q9CTH6 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Fcf1Q9CTH6 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Fcf1Q9CTH6 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Fcf1Q9CTH6 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Fcf1Q9CTH6 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Fcf1Q9CTH6 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Fcf1Q9CTH6 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Fcf1Q9CTH6 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Fcf1Q9CTH6 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Fcf1Q9CTH6 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Fcf1Q9CTH6 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Fcf1Q9CTH6 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Fcf1Q9CTH6 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Fcf1Q9CTH6 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Fcf1Q9CTH6 Gm7977-201ENSMUST00000193787 748 ntBASIC17.23■□□□□ 0.35
Fcf1Q9CTH6 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Fcf1Q9CTH6 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC17.23■□□□□ 0.35
Fcf1Q9CTH6 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Fcf1Q9CTH6 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Fcf1Q9CTH6 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms