Protein–RNA interactions for Protein: Q9CQU3

Rer1, Protein RER1, mousemouse

Known RBP Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rer1Q9CQU3 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC14.07□□□□□ -0.16
Rer1Q9CQU3 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rer1Q9CQU3 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Rer1Q9CQU3 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rer1Q9CQU3 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rer1Q9CQU3 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rer1Q9CQU3 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rer1Q9CQU3 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Rer1Q9CQU3 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rer1Q9CQU3 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC14.07□□□□□ -0.16
Rer1Q9CQU3 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Rer1Q9CQU3 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rer1Q9CQU3 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rer1Q9CQU3 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Rer1Q9CQU3 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Rer1Q9CQU3 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
Rer1Q9CQU3 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rer1Q9CQU3 Gm15039-201ENSMUST00000118914 875 ntBASIC14.06□□□□□ -0.16
Rer1Q9CQU3 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC14.06□□□□□ -0.16
Rer1Q9CQU3 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC14.06□□□□□ -0.16
Rer1Q9CQU3 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Rer1Q9CQU3 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rer1Q9CQU3 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Rer1Q9CQU3 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rer1Q9CQU3 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rer1Q9CQU3 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rer1Q9CQU3 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rer1Q9CQU3 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rer1Q9CQU3 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rer1Q9CQU3 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rer1Q9CQU3 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Rer1Q9CQU3 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rer1Q9CQU3 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Rer1Q9CQU3 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Rer1Q9CQU3 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rer1Q9CQU3 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rer1Q9CQU3 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Rer1Q9CQU3 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rer1Q9CQU3 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Rer1Q9CQU3 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rer1Q9CQU3 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rer1Q9CQU3 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Rer1Q9CQU3 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC14.05□□□□□ -0.16
Rer1Q9CQU3 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Rer1Q9CQU3 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Rer1Q9CQU3 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rer1Q9CQU3 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rer1Q9CQU3 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rer1Q9CQU3 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rer1Q9CQU3 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Rer1Q9CQU3 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Rer1Q9CQU3 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rer1Q9CQU3 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Rer1Q9CQU3 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rer1Q9CQU3 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rer1Q9CQU3 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rer1Q9CQU3 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rer1Q9CQU3 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC14.04□□□□□ -0.16
Rer1Q9CQU3 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rer1Q9CQU3 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC14.04□□□□□ -0.16
Rer1Q9CQU3 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Rer1Q9CQU3 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rer1Q9CQU3 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
Rer1Q9CQU3 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Rer1Q9CQU3 Gm13158-201ENSMUST00000122007 736 ntBASIC14.04□□□□□ -0.16
Rer1Q9CQU3 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Rer1Q9CQU3 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Rer1Q9CQU3 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rer1Q9CQU3 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rer1Q9CQU3 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Rer1Q9CQU3 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Rer1Q9CQU3 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rer1Q9CQU3 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rer1Q9CQU3 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Rer1Q9CQU3 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rer1Q9CQU3 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rer1Q9CQU3 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rer1Q9CQU3 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rer1Q9CQU3 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rer1Q9CQU3 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rer1Q9CQU3 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rer1Q9CQU3 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Rer1Q9CQU3 Gm7292-201ENSMUST00000194706 2527 ntBASIC14.03□□□□□ -0.16
Rer1Q9CQU3 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Rer1Q9CQU3 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Rer1Q9CQU3 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Rer1Q9CQU3 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rer1Q9CQU3 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rer1Q9CQU3 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rer1Q9CQU3 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rer1Q9CQU3 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Rer1Q9CQU3 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
Rer1Q9CQU3 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.16
Rer1Q9CQU3 Gm19721-201ENSMUST00000195284 1764 ntBASIC14.02□□□□□ -0.16
Rer1Q9CQU3 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rer1Q9CQU3 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC14.02□□□□□ -0.17
Rer1Q9CQU3 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Rer1Q9CQU3 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
Rer1Q9CQU3 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC14.02□□□□□ -0.17
Rer1Q9CQU3 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC14.02□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms