Protein–RNA interactions for Protein: Q99PV0

Prpf8, Pre-mRNA-processing-splicing factor 8, mousemouse

Known RBP Predictions only

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf8Q99PV0 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC14.02□□□□□ -0.16
Prpf8Q99PV0 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Prpf8Q99PV0 Cxcl14-202ENSMUST00000224801 1467 ntBASIC14.02□□□□□ -0.16
Prpf8Q99PV0 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Prpf8Q99PV0 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Prpf8Q99PV0 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Prpf8Q99PV0 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
Prpf8Q99PV0 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Prpf8Q99PV0 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Prpf8Q99PV0 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Prpf8Q99PV0 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Prpf8Q99PV0 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC14.02□□□□□ -0.17
Prpf8Q99PV0 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Prpf8Q99PV0 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC14.02□□□□□ -0.17
Prpf8Q99PV0 Gm3272-201ENSMUST00000181181 1229 ntBASIC14.02□□□□□ -0.17
Prpf8Q99PV0 Gm7213-201ENSMUST00000215977 950 ntBASIC14.02□□□□□ -0.17
Prpf8Q99PV0 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Prpf8Q99PV0 Gm10566-201ENSMUST00000086739 996 ntBASIC14.02□□□□□ -0.17
Prpf8Q99PV0 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Prpf8Q99PV0 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Prpf8Q99PV0 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Prpf8Q99PV0 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Prpf8Q99PV0 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Prpf8Q99PV0 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Prpf8Q99PV0 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Prpf8Q99PV0 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC14.01□□□□□ -0.17
Prpf8Q99PV0 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Prpf8Q99PV0 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Prpf8Q99PV0 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Prpf8Q99PV0 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Prpf8Q99PV0 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Prpf8Q99PV0 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Prpf8Q99PV0 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Prpf8Q99PV0 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Prpf8Q99PV0 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Prpf8Q99PV0 Actl10-202ENSMUST00000226583 1501 ntBASIC14.01□□□□□ -0.17
Prpf8Q99PV0 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Prpf8Q99PV0 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC14.01□□□□□ -0.17
Prpf8Q99PV0 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Prpf8Q99PV0 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC14.01□□□□□ -0.17
Prpf8Q99PV0 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Prpf8Q99PV0 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Prpf8Q99PV0 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Prpf8Q99PV0 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Prpf8Q99PV0 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
Prpf8Q99PV0 Gm11950-201ENSMUST00000121615 838 ntBASIC14□□□□□ -0.17
Prpf8Q99PV0 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Prpf8Q99PV0 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC14□□□□□ -0.17
Prpf8Q99PV0 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC14□□□□□ -0.17
Prpf8Q99PV0 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Prpf8Q99PV0 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Prpf8Q99PV0 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Prpf8Q99PV0 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Prpf8Q99PV0 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
Prpf8Q99PV0 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Prpf8Q99PV0 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Prpf8Q99PV0 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Prpf8Q99PV0 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC14□□□□□ -0.17
Prpf8Q99PV0 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Prpf8Q99PV0 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Prpf8Q99PV0 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Prpf8Q99PV0 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Prpf8Q99PV0 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Prpf8Q99PV0 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC14□□□□□ -0.17
Prpf8Q99PV0 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Prpf8Q99PV0 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Prpf8Q99PV0 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC13.99□□□□□ -0.17
Prpf8Q99PV0 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Prpf8Q99PV0 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC13.99□□□□□ -0.17
Prpf8Q99PV0 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Prpf8Q99PV0 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
Prpf8Q99PV0 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Prpf8Q99PV0 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
Prpf8Q99PV0 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Prpf8Q99PV0 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC13.99□□□□□ -0.17
Prpf8Q99PV0 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Prpf8Q99PV0 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Prpf8Q99PV0 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Prpf8Q99PV0 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Prpf8Q99PV0 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC13.99□□□□□ -0.17
Prpf8Q99PV0 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC13.99□□□□□ -0.17
Prpf8Q99PV0 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Prpf8Q99PV0 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Prpf8Q99PV0 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Prpf8Q99PV0 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Prpf8Q99PV0 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
Prpf8Q99PV0 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC13.98□□□□□ -0.17
Prpf8Q99PV0 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Prpf8Q99PV0 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Prpf8Q99PV0 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Prpf8Q99PV0 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Prpf8Q99PV0 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Prpf8Q99PV0 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Prpf8Q99PV0 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Prpf8Q99PV0 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Prpf8Q99PV0 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Prpf8Q99PV0 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC13.98□□□□□ -0.17
Prpf8Q99PV0 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Prpf8Q99PV0 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC13.98□□□□□ -0.17
Prpf8Q99PV0 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms