Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Cdh23Q99PF4 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Cdh23Q99PF4 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Cdh23Q99PF4 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cdh23Q99PF4 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cdh23Q99PF4 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cdh23Q99PF4 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cdh23Q99PF4 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC17.52■□□□□ 0.4
Cdh23Q99PF4 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cdh23Q99PF4 Gm5784-201ENSMUST00000179344 2478 ntBASIC17.52■□□□□ 0.4
Cdh23Q99PF4 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Cdh23Q99PF4 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Cdh23Q99PF4 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Cdh23Q99PF4 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Cdh23Q99PF4 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Cdh23Q99PF4 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Cdh23Q99PF4 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.39
Cdh23Q99PF4 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cdh23Q99PF4 Idnk-204ENSMUST00000226010 1898 ntBASIC17.51■□□□□ 0.39
Cdh23Q99PF4 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cdh23Q99PF4 Gm27867-201ENSMUST00000184778 125 ntBASIC17.51■□□□□ 0.39
Cdh23Q99PF4 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
Cdh23Q99PF4 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cdh23Q99PF4 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Cdh23Q99PF4 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Cdh23Q99PF4 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cdh23Q99PF4 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cdh23Q99PF4 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC17.51■□□□□ 0.39
Cdh23Q99PF4 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Cdh23Q99PF4 Gm8097-201ENSMUST00000117903 829 ntBASIC17.51■□□□□ 0.39
Cdh23Q99PF4 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Cdh23Q99PF4 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC17.51■□□□□ 0.39
Cdh23Q99PF4 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cdh23Q99PF4 Gm13127-201ENSMUST00000118978 1389 ntBASIC17.5■□□□□ 0.39
Cdh23Q99PF4 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cdh23Q99PF4 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cdh23Q99PF4 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Cdh23Q99PF4 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Cdh23Q99PF4 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cdh23Q99PF4 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC17.5■□□□□ 0.39
Cdh23Q99PF4 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cdh23Q99PF4 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC17.5■□□□□ 0.39
Cdh23Q99PF4 AC158982.1-201ENSMUST00000228377 901 ntBASIC17.5■□□□□ 0.39
Cdh23Q99PF4 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Cdh23Q99PF4 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC17.5■□□□□ 0.39
Cdh23Q99PF4 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Cdh23Q99PF4 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cdh23Q99PF4 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cdh23Q99PF4 Gm7230-201ENSMUST00000173026 815 ntBASIC17.49■□□□□ 0.39
Cdh23Q99PF4 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cdh23Q99PF4 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cdh23Q99PF4 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cdh23Q99PF4 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cdh23Q99PF4 Gm37374-201ENSMUST00000194954 1829 ntBASIC17.49■□□□□ 0.39
Cdh23Q99PF4 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC17.49■□□□□ 0.39
Cdh23Q99PF4 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC17.49■□□□□ 0.39
Cdh23Q99PF4 AC160338.1-201ENSMUST00000214232 705 ntBASIC17.49■□□□□ 0.39
Cdh23Q99PF4 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cdh23Q99PF4 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC17.49■□□□□ 0.39
Cdh23Q99PF4 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cdh23Q99PF4 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cdh23Q99PF4 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cdh23Q99PF4 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
Cdh23Q99PF4 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cdh23Q99PF4 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Cdh23Q99PF4 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cdh23Q99PF4 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cdh23Q99PF4 AC122901.1-201ENSMUST00000214203 1790 ntBASIC17.48■□□□□ 0.39
Cdh23Q99PF4 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Cdh23Q99PF4 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Cdh23Q99PF4 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cdh23Q99PF4 Gm27321-201ENSMUST00000185021 205 ntBASIC17.48■□□□□ 0.39
Cdh23Q99PF4 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cdh23Q99PF4 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cdh23Q99PF4 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Cdh23Q99PF4 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cdh23Q99PF4 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Cdh23Q99PF4 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC17.48■□□□□ 0.39
Cdh23Q99PF4 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC17.48■□□□□ 0.39
Cdh23Q99PF4 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Cdh23Q99PF4 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cdh23Q99PF4 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cdh23Q99PF4 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
Cdh23Q99PF4 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cdh23Q99PF4 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
Cdh23Q99PF4 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC17.47■□□□□ 0.39
Cdh23Q99PF4 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Cdh23Q99PF4 Chchd1-203ENSMUST00000224633 557 ntBASIC17.47■□□□□ 0.39
Cdh23Q99PF4 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cdh23Q99PF4 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC17.47■□□□□ 0.39
Cdh23Q99PF4 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cdh23Q99PF4 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cdh23Q99PF4 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC17.47■□□□□ 0.39
Cdh23Q99PF4 Grk6-207ENSMUST00000225925 2769 ntBASIC17.47■□□□□ 0.39
Cdh23Q99PF4 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC17.47■□□□□ 0.39
Cdh23Q99PF4 AC154222.1-201ENSMUST00000223882 475 ntBASIC17.47■□□□□ 0.39
Cdh23Q99PF4 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cdh23Q99PF4 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cdh23Q99PF4 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cdh23Q99PF4 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms