Protein–RNA interactions for Protein: Q99MB1

Tlr3, Toll-like receptor 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr3Q99MB1 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Tlr3Q99MB1 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Tlr3Q99MB1 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Tlr3Q99MB1 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
Tlr3Q99MB1 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Tlr3Q99MB1 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Tlr3Q99MB1 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Tlr3Q99MB1 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Tlr3Q99MB1 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Tlr3Q99MB1 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Tlr3Q99MB1 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Tlr3Q99MB1 Gm5898-201ENSMUST00000121016 2071 ntBASIC18.42■□□□□ 0.54
Tlr3Q99MB1 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Tlr3Q99MB1 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Tlr3Q99MB1 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Tlr3Q99MB1 Gm37025-201ENSMUST00000195159 829 ntBASIC18.42■□□□□ 0.54
Tlr3Q99MB1 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC18.42■□□□□ 0.54
Tlr3Q99MB1 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Tlr3Q99MB1 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
Tlr3Q99MB1 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Tlr3Q99MB1 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Tlr3Q99MB1 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Tlr3Q99MB1 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Tlr3Q99MB1 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Tlr3Q99MB1 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Tlr3Q99MB1 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Tlr3Q99MB1 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Tlr3Q99MB1 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Tlr3Q99MB1 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Tlr3Q99MB1 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Tlr3Q99MB1 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Tlr3Q99MB1 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC18.41■□□□□ 0.54
Tlr3Q99MB1 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Tlr3Q99MB1 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Tlr3Q99MB1 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC18.41■□□□□ 0.54
Tlr3Q99MB1 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC18.41■□□□□ 0.54
Tlr3Q99MB1 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Tlr3Q99MB1 Timm23-208ENSMUST00000226683 750 ntBASIC18.41■□□□□ 0.54
Tlr3Q99MB1 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Tlr3Q99MB1 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Tlr3Q99MB1 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Tlr3Q99MB1 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Tlr3Q99MB1 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Tlr3Q99MB1 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Tlr3Q99MB1 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Tlr3Q99MB1 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC18.41■□□□□ 0.54
Tlr3Q99MB1 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Tlr3Q99MB1 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Tlr3Q99MB1 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Tlr3Q99MB1 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Tlr3Q99MB1 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Tlr3Q99MB1 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Tlr3Q99MB1 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
Tlr3Q99MB1 Gm6433-201ENSMUST00000118634 875 ntBASIC18.4■□□□□ 0.54
Tlr3Q99MB1 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Tlr3Q99MB1 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC18.4■□□□□ 0.54
Tlr3Q99MB1 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Tlr3Q99MB1 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Tlr3Q99MB1 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC18.4■□□□□ 0.54
Tlr3Q99MB1 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Tlr3Q99MB1 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Tlr3Q99MB1 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Tlr3Q99MB1 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Tlr3Q99MB1 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Tlr3Q99MB1 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Tlr3Q99MB1 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC18.39■□□□□ 0.54
Tlr3Q99MB1 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Tlr3Q99MB1 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Tlr3Q99MB1 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Tlr3Q99MB1 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Tlr3Q99MB1 Gm38027-201ENSMUST00000192315 235 ntBASIC18.39■□□□□ 0.53
Tlr3Q99MB1 Gm43799-201ENSMUST00000201845 579 ntBASIC18.39■□□□□ 0.53
Tlr3Q99MB1 AC156016.1-201ENSMUST00000227190 1035 ntBASIC18.39■□□□□ 0.53
Tlr3Q99MB1 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Tlr3Q99MB1 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Tlr3Q99MB1 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Tlr3Q99MB1 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Tlr3Q99MB1 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC18.39■□□□□ 0.53
Tlr3Q99MB1 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Tlr3Q99MB1 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Tlr3Q99MB1 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Tlr3Q99MB1 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Tlr3Q99MB1 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tlr3Q99MB1 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tlr3Q99MB1 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC18.38■□□□□ 0.53
Tlr3Q99MB1 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Tlr3Q99MB1 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Tlr3Q99MB1 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC18.38■□□□□ 0.53
Tlr3Q99MB1 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC18.38■□□□□ 0.53
Tlr3Q99MB1 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tlr3Q99MB1 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tlr3Q99MB1 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tlr3Q99MB1 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tlr3Q99MB1 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Tlr3Q99MB1 Gm43338-201ENSMUST00000198617 2223 ntBASIC18.38■□□□□ 0.53
Tlr3Q99MB1 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Tlr3Q99MB1 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tlr3Q99MB1 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Tlr3Q99MB1 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tlr3Q99MB1 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms