Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 Dmtn-207ENSMUST00000228001 2437 ntBASIC19.76■□□□□ 0.75
Rfc4Q99J62 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rfc4Q99J62 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Rfc4Q99J62 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC19.76■□□□□ 0.75
Rfc4Q99J62 Olfr129-201ENSMUST00000122318 993 ntBASIC19.76■□□□□ 0.75
Rfc4Q99J62 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC19.76■□□□□ 0.75
Rfc4Q99J62 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC19.76■□□□□ 0.75
Rfc4Q99J62 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC19.76■□□□□ 0.75
Rfc4Q99J62 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC19.76■□□□□ 0.75
Rfc4Q99J62 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC19.76■□□□□ 0.75
Rfc4Q99J62 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Rfc4Q99J62 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rfc4Q99J62 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rfc4Q99J62 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rfc4Q99J62 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC19.76■□□□□ 0.75
Rfc4Q99J62 Gm42939-201ENSMUST00000197514 2205 ntBASIC19.76■□□□□ 0.75
Rfc4Q99J62 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rfc4Q99J62 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rfc4Q99J62 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Rfc4Q99J62 AC154855.1-201ENSMUST00000227353 1458 ntBASIC19.75■□□□□ 0.75
Rfc4Q99J62 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Rfc4Q99J62 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC19.75■□□□□ 0.75
Rfc4Q99J62 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Rfc4Q99J62 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC19.75■□□□□ 0.75
Rfc4Q99J62 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC19.75■□□□□ 0.75
Rfc4Q99J62 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Rfc4Q99J62 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rfc4Q99J62 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC19.75■□□□□ 0.75
Rfc4Q99J62 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
Rfc4Q99J62 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC19.75■□□□□ 0.75
Rfc4Q99J62 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rfc4Q99J62 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rfc4Q99J62 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rfc4Q99J62 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rfc4Q99J62 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Rfc4Q99J62 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rfc4Q99J62 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rfc4Q99J62 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Rfc4Q99J62 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rfc4Q99J62 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Rfc4Q99J62 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rfc4Q99J62 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
Rfc4Q99J62 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rfc4Q99J62 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Rfc4Q99J62 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rfc4Q99J62 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC19.74■□□□□ 0.75
Rfc4Q99J62 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Rfc4Q99J62 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rfc4Q99J62 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rfc4Q99J62 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Rfc4Q99J62 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rfc4Q99J62 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
Rfc4Q99J62 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
Rfc4Q99J62 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC19.73■□□□□ 0.75
Rfc4Q99J62 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Rfc4Q99J62 Gm34391-201ENSMUST00000203706 907 ntBASIC19.73■□□□□ 0.75
Rfc4Q99J62 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rfc4Q99J62 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rfc4Q99J62 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rfc4Q99J62 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC19.73■□□□□ 0.75
Rfc4Q99J62 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rfc4Q99J62 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC19.73■□□□□ 0.75
Rfc4Q99J62 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Rfc4Q99J62 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC19.73■□□□□ 0.75
Rfc4Q99J62 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rfc4Q99J62 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Rfc4Q99J62 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC19.72■□□□□ 0.75
Rfc4Q99J62 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Rfc4Q99J62 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rfc4Q99J62 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC19.72■□□□□ 0.75
Rfc4Q99J62 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC19.72■□□□□ 0.75
Rfc4Q99J62 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rfc4Q99J62 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC19.72■□□□□ 0.75
Rfc4Q99J62 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rfc4Q99J62 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rfc4Q99J62 Birc2-201ENSMUST00000054878 378 ntBASIC19.72■□□□□ 0.75
Rfc4Q99J62 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC19.72■□□□□ 0.75
Rfc4Q99J62 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Rfc4Q99J62 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rfc4Q99J62 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rfc4Q99J62 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rfc4Q99J62 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Rfc4Q99J62 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC19.71■□□□□ 0.75
Rfc4Q99J62 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rfc4Q99J62 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC19.71■□□□□ 0.75
Rfc4Q99J62 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rfc4Q99J62 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rfc4Q99J62 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rfc4Q99J62 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Rfc4Q99J62 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rfc4Q99J62 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC19.71■□□□□ 0.75
Rfc4Q99J62 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Rfc4Q99J62 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rfc4Q99J62 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Rfc4Q99J62 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
Rfc4Q99J62 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC19.71■□□□□ 0.75
Rfc4Q99J62 Gm5828-201ENSMUST00000071842 1860 ntBASIC19.71■□□□□ 0.75
Rfc4Q99J62 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Rfc4Q99J62 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Rfc4Q99J62 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms