Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Trex1Q91XB0 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC19.66■□□□□ 0.74
Trex1Q91XB0 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC19.66■□□□□ 0.74
Trex1Q91XB0 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC19.66■□□□□ 0.74
Trex1Q91XB0 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Trex1Q91XB0 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trex1Q91XB0 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC19.66■□□□□ 0.74
Trex1Q91XB0 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trex1Q91XB0 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Trex1Q91XB0 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Trex1Q91XB0 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trex1Q91XB0 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trex1Q91XB0 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trex1Q91XB0 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trex1Q91XB0 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trex1Q91XB0 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Trex1Q91XB0 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trex1Q91XB0 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trex1Q91XB0 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trex1Q91XB0 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC19.65■□□□□ 0.74
Trex1Q91XB0 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trex1Q91XB0 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Trex1Q91XB0 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trex1Q91XB0 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
Trex1Q91XB0 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trex1Q91XB0 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC19.65■□□□□ 0.74
Trex1Q91XB0 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trex1Q91XB0 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC19.65■□□□□ 0.74
Trex1Q91XB0 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trex1Q91XB0 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC19.64■□□□□ 0.74
Trex1Q91XB0 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Trex1Q91XB0 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trex1Q91XB0 Olfr129-201ENSMUST00000122318 993 ntBASIC19.64■□□□□ 0.73
Trex1Q91XB0 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Trex1Q91XB0 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Trex1Q91XB0 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trex1Q91XB0 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trex1Q91XB0 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trex1Q91XB0 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trex1Q91XB0 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Trex1Q91XB0 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Trex1Q91XB0 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Trex1Q91XB0 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Trex1Q91XB0 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
Trex1Q91XB0 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
Trex1Q91XB0 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Trex1Q91XB0 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trex1Q91XB0 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trex1Q91XB0 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trex1Q91XB0 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trex1Q91XB0 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trex1Q91XB0 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Trex1Q91XB0 Gm11336-201ENSMUST00000118168 334 ntBASIC19.62■□□□□ 0.73
Trex1Q91XB0 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Trex1Q91XB0 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trex1Q91XB0 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC19.62■□□□□ 0.73
Trex1Q91XB0 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trex1Q91XB0 Umpk-ps-201ENSMUST00000211897 827 ntBASIC19.62■□□□□ 0.73
Trex1Q91XB0 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trex1Q91XB0 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trex1Q91XB0 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Trex1Q91XB0 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trex1Q91XB0 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trex1Q91XB0 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Trex1Q91XB0 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC19.62■□□□□ 0.73
Trex1Q91XB0 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
Trex1Q91XB0 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Trex1Q91XB0 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trex1Q91XB0 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trex1Q91XB0 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trex1Q91XB0 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trex1Q91XB0 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trex1Q91XB0 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Trex1Q91XB0 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Trex1Q91XB0 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trex1Q91XB0 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trex1Q91XB0 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trex1Q91XB0 Gm13186-201ENSMUST00000118031 316 ntBASIC19.61■□□□□ 0.73
Trex1Q91XB0 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trex1Q91XB0 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC19.61■□□□□ 0.73
Trex1Q91XB0 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trex1Q91XB0 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trex1Q91XB0 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trex1Q91XB0 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Trex1Q91XB0 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trex1Q91XB0 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Trex1Q91XB0 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trex1Q91XB0 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Trex1Q91XB0 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Trex1Q91XB0 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trex1Q91XB0 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC19.6■□□□□ 0.73
Trex1Q91XB0 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Trex1Q91XB0 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Trex1Q91XB0 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Trex1Q91XB0 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trex1Q91XB0 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trex1Q91XB0 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC19.6■□□□□ 0.73
Trex1Q91XB0 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Trex1Q91XB0 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trex1Q91XB0 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms