Protein–RNA interactions for Protein: Q8VDS4

Rprd1a, Regulation of nuclear pre-mRNA domain-containing protein 1A, mousemouse

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rprd1aQ8VDS4 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rprd1aQ8VDS4 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rprd1aQ8VDS4 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rprd1aQ8VDS4 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rprd1aQ8VDS4 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
Rprd1aQ8VDS4 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Rprd1aQ8VDS4 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rprd1aQ8VDS4 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rprd1aQ8VDS4 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC17.65■□□□□ 0.42
Rprd1aQ8VDS4 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rprd1aQ8VDS4 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
Rprd1aQ8VDS4 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Rprd1aQ8VDS4 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Rprd1aQ8VDS4 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rprd1aQ8VDS4 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rprd1aQ8VDS4 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC17.65■□□□□ 0.42
Rprd1aQ8VDS4 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC17.65■□□□□ 0.42
Rprd1aQ8VDS4 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
Rprd1aQ8VDS4 AC159205.6-201ENSMUST00000224935 887 ntBASIC17.65■□□□□ 0.42
Rprd1aQ8VDS4 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rprd1aQ8VDS4 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rprd1aQ8VDS4 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rprd1aQ8VDS4 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Rprd1aQ8VDS4 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rprd1aQ8VDS4 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rprd1aQ8VDS4 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rprd1aQ8VDS4 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC17.65■□□□□ 0.42
Rprd1aQ8VDS4 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Rprd1aQ8VDS4 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rprd1aQ8VDS4 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rprd1aQ8VDS4 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Rprd1aQ8VDS4 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Rprd1aQ8VDS4 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Rprd1aQ8VDS4 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Rprd1aQ8VDS4 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC17.64■□□□□ 0.41
Rprd1aQ8VDS4 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Rprd1aQ8VDS4 Gm7889-201ENSMUST00000185591 958 ntBASIC17.64■□□□□ 0.41
Rprd1aQ8VDS4 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Rprd1aQ8VDS4 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Rprd1aQ8VDS4 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rprd1aQ8VDS4 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rprd1aQ8VDS4 Gm9987-201ENSMUST00000069768 567 ntBASIC17.64■□□□□ 0.41
Rprd1aQ8VDS4 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Rprd1aQ8VDS4 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rprd1aQ8VDS4 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rprd1aQ8VDS4 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Rprd1aQ8VDS4 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rprd1aQ8VDS4 Gm8668-201ENSMUST00000120559 1447 ntBASIC17.64■□□□□ 0.41
Rprd1aQ8VDS4 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rprd1aQ8VDS4 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rprd1aQ8VDS4 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rprd1aQ8VDS4 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rprd1aQ8VDS4 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rprd1aQ8VDS4 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rprd1aQ8VDS4 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC17.63■□□□□ 0.41
Rprd1aQ8VDS4 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rprd1aQ8VDS4 Gm17661-201ENSMUST00000170317 270 ntBASIC17.63■□□□□ 0.41
Rprd1aQ8VDS4 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Rprd1aQ8VDS4 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rprd1aQ8VDS4 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Rprd1aQ8VDS4 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Rprd1aQ8VDS4 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Rprd1aQ8VDS4 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rprd1aQ8VDS4 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rprd1aQ8VDS4 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rprd1aQ8VDS4 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rprd1aQ8VDS4 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Rprd1aQ8VDS4 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rprd1aQ8VDS4 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rprd1aQ8VDS4 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rprd1aQ8VDS4 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Rprd1aQ8VDS4 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rprd1aQ8VDS4 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Rprd1aQ8VDS4 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC17.62■□□□□ 0.41
Rprd1aQ8VDS4 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rprd1aQ8VDS4 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Rprd1aQ8VDS4 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Rprd1aQ8VDS4 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Rprd1aQ8VDS4 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rprd1aQ8VDS4 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC17.61■□□□□ 0.41
Rprd1aQ8VDS4 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Rprd1aQ8VDS4 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC17.61■□□□□ 0.41
Rprd1aQ8VDS4 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Rprd1aQ8VDS4 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC17.61■□□□□ 0.41
Rprd1aQ8VDS4 Il3ra-202ENSMUST00000223589 738 ntBASIC17.61■□□□□ 0.41
Rprd1aQ8VDS4 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rprd1aQ8VDS4 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rprd1aQ8VDS4 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Rprd1aQ8VDS4 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rprd1aQ8VDS4 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Rprd1aQ8VDS4 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rprd1aQ8VDS4 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rprd1aQ8VDS4 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rprd1aQ8VDS4 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Rprd1aQ8VDS4 Gm13836-201ENSMUST00000121159 501 ntBASIC17.6■□□□□ 0.41
Rprd1aQ8VDS4 Gm2274-201ENSMUST00000184539 609 ntBASIC17.6■□□□□ 0.41
Rprd1aQ8VDS4 AC120002.2-201ENSMUST00000220205 773 ntBASIC17.6■□□□□ 0.41
Rprd1aQ8VDS4 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rprd1aQ8VDS4 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Rprd1aQ8VDS4 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms