Protein–RNA interactions for Protein: Q8VCI7

Swsap1, ATPase SWSAP1, mousemouse

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Swsap1Q8VCI7 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Swsap1Q8VCI7 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Swsap1Q8VCI7 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Swsap1Q8VCI7 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Swsap1Q8VCI7 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Swsap1Q8VCI7 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
Swsap1Q8VCI7 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC15.49■□□□□ 0.07
Swsap1Q8VCI7 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Swsap1Q8VCI7 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
Swsap1Q8VCI7 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC15.49■□□□□ 0.07
Swsap1Q8VCI7 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Swsap1Q8VCI7 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Swsap1Q8VCI7 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Swsap1Q8VCI7 Gm20472-201ENSMUST00000174403 1240 ntBASIC15.49■□□□□ 0.07
Swsap1Q8VCI7 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Swsap1Q8VCI7 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Swsap1Q8VCI7 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC15.49■□□□□ 0.07
Swsap1Q8VCI7 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Swsap1Q8VCI7 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Swsap1Q8VCI7 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Swsap1Q8VCI7 Gm37374-201ENSMUST00000194954 1829 ntBASIC15.49■□□□□ 0.07
Swsap1Q8VCI7 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Swsap1Q8VCI7 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Swsap1Q8VCI7 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Swsap1Q8VCI7 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Swsap1Q8VCI7 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Swsap1Q8VCI7 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Swsap1Q8VCI7 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Swsap1Q8VCI7 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Swsap1Q8VCI7 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
Swsap1Q8VCI7 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Swsap1Q8VCI7 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Swsap1Q8VCI7 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Swsap1Q8VCI7 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Swsap1Q8VCI7 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Swsap1Q8VCI7 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC15.48■□□□□ 0.07
Swsap1Q8VCI7 Gm29791-202ENSMUST00000207888 369 ntBASIC15.48■□□□□ 0.07
Swsap1Q8VCI7 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Swsap1Q8VCI7 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Swsap1Q8VCI7 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC15.48■□□□□ 0.07
Swsap1Q8VCI7 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Swsap1Q8VCI7 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Swsap1Q8VCI7 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Swsap1Q8VCI7 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Swsap1Q8VCI7 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Swsap1Q8VCI7 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Swsap1Q8VCI7 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Swsap1Q8VCI7 Gm7292-201ENSMUST00000194706 2527 ntBASIC15.48■□□□□ 0.07
Swsap1Q8VCI7 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Swsap1Q8VCI7 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Swsap1Q8VCI7 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Swsap1Q8VCI7 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Swsap1Q8VCI7 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Swsap1Q8VCI7 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Swsap1Q8VCI7 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Swsap1Q8VCI7 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Swsap1Q8VCI7 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Swsap1Q8VCI7 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Swsap1Q8VCI7 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Swsap1Q8VCI7 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Swsap1Q8VCI7 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Swsap1Q8VCI7 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Swsap1Q8VCI7 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Swsap1Q8VCI7 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Swsap1Q8VCI7 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Swsap1Q8VCI7 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Swsap1Q8VCI7 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC15.47■□□□□ 0.07
Swsap1Q8VCI7 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Swsap1Q8VCI7 AC135963.1-201ENSMUST00000211640 717 ntBASIC15.47■□□□□ 0.07
Swsap1Q8VCI7 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Swsap1Q8VCI7 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Swsap1Q8VCI7 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Swsap1Q8VCI7 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Swsap1Q8VCI7 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Swsap1Q8VCI7 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Swsap1Q8VCI7 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Swsap1Q8VCI7 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Swsap1Q8VCI7 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Swsap1Q8VCI7 Gm45244-201ENSMUST00000211328 2200 ntBASIC15.47■□□□□ 0.07
Swsap1Q8VCI7 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Swsap1Q8VCI7 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Swsap1Q8VCI7 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Swsap1Q8VCI7 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Swsap1Q8VCI7 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Swsap1Q8VCI7 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Swsap1Q8VCI7 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC15.46■□□□□ 0.07
Swsap1Q8VCI7 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC15.46■□□□□ 0.07
Swsap1Q8VCI7 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Swsap1Q8VCI7 Gm16042-201ENSMUST00000204813 1247 ntBASIC15.46■□□□□ 0.07
Swsap1Q8VCI7 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Swsap1Q8VCI7 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Swsap1Q8VCI7 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Swsap1Q8VCI7 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Swsap1Q8VCI7 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Swsap1Q8VCI7 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Swsap1Q8VCI7 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Swsap1Q8VCI7 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Swsap1Q8VCI7 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.06
Swsap1Q8VCI7 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Swsap1Q8VCI7 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms